RNA–Protein interactions for RNA: ENST00000598619.1

HMGN2P46-208, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

BASIC

Gene HMGN2P46, Length 490 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-208ENST00000598619 ZNF521Q96K83 1311 aa11.31□□□□□ -0.6
HMGN2P46-208ENST00000598619 E9PSI1 815 aa11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 PDE8AO60658 829 aa11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 IGKV5-2P06315 115 aa11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 DPP8Q6V1X1 898 aaPredicted RBP11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 MPNDQ8N594 471 aa11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 LAMB2P55268 1798 aa11.3□□□□□ -0.6
HMGN2P46-208ENST00000598619 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 NEURL1BA8MQ27 555 aa11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 TMC4Q7Z404 712 aa11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 MIER1Q8N108 512 aa11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 DNAAF4Q8WXU2 420 aa11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
HMGN2P46-208ENST00000598619 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 EIF6P56537 245 aaKnown RBP11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 RPS8P62241 208 aaKnown RBP11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 RBM46Q8TBY0 533 aaKnown RBP11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 SEC31BQ9NQW1 1179 aa11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 NSFL1CQ9UNZ2 370 aaKnown RBP11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
HMGN2P46-208ENST00000598619 F6X3S4 739 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 FZD9O00144 591 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 HSPA6P17066 643 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 GCKRQ14397 625 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 AOC3Q16853 763 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 LINS1Q8NG48 757 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 ZNF541Q9H0D2 1346 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 TAF1P21675 1872 aa11.27□□□□□ -0.61
HMGN2P46-208ENST00000598619 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
HMGN2P46-208ENST00000598619 IQCA1LA6NCM1 817 aa11.26□□□□□ -0.61
HMGN2P46-208ENST00000598619 POTECB2RU33 542 aa11.26□□□□□ -0.61
HMGN2P46-208ENST00000598619 C6orf229H3BNL8 230 aa11.26□□□□□ -0.61
HMGN2P46-208ENST00000598619 H7C1W4 665 aa11.26□□□□□ -0.61
HMGN2P46-208ENST00000598619 SMC1BQ8NDV3 1235 aa11.26□□□□□ -0.61
HMGN2P46-208ENST00000598619 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
HMGN2P46-208ENST00000598619 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 CTSWP56202 376 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 GPSM2P81274 684 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 FSTL1Q12841 308 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 GPC2Q8N158 579 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 RTFDC1Q9BY42 306 aaPredicted RBP11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 WDR90Q96KV7 1748 aa11.25□□□□□ -0.61
HMGN2P46-208ENST00000598619 G3V3G9 751 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 EAPPQ56P03 285 aaPredicted RBP11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 BEND3Q5T5X7 828 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 EYA3Q99504 573 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 HACL1Q9UJ83 578 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 CACNA1FO60840 1977 aa11.24□□□□□ -0.61
HMGN2P46-208ENST00000598619 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 BCL2L13Q9BXK5 485 aa11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 ZC3H12CQ9C0D7 883 aaKnown RBP11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 SRCIN1Q9C0H9 1055 aa11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 GREM2Q9H772 168 aa11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 CHMP3Q9Y3E7 222 aa11.23□□□□□ -0.61
HMGN2P46-208ENST00000598619 RAD17O75943 681 aa11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 COL4A5P29400 1685 aa11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 EPHX2P34913 555 aa11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 IGHMBP2P38935 993 aaKnown RBP11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 APLP1P51693 650 aa11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 TBC1D16Q8TBP0 767 aa11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 TAF1DQ9H5J8 278 aaPredicted RBP11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 GGA1Q9UJY5 639 aa11.22□□□□□ -0.61
HMGN2P46-208ENST00000598619 COL4A1P02462 1669 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 GRM8O00222 908 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 ALDH1L1O75891 902 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 UFL1O94874 794 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 ITGA6P23229 1130 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 CASP7P55210 303 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 HNRNPUQ00839 825 aaKnown RBP eCLIP11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 CXCL9Q07325 125 aa11.21□□□□□ -0.61
HMGN2P46-208ENST00000598619 TNIP1Q15025 636 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms