RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 CTSWP56202 376 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 FOXO4P98177 505 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 MASTLQ96GX5 879 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 GREM2Q9H772 168 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 SEC31BQ9NQW1 1179 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 DDX19BQ9UMR2 479 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 DDX60Q8IY21 1712 aaKnown RBP11.65□□□□□ -0.54
ZNF548-206ENST00000597047 NRXN2Q9P2S2 1712 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 IBTKQ9P2D0 1353 aaPredicted RBP11.65□□□□□ -0.55
ZNF548-206ENST00000597047 TAF1P21675 1872 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 ZBTB7BO15156 539 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-206ENST00000597047 NEFLP07196 543 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 GPR162Q16538 588 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 TTLL11Q8NHH1 800 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 EXOC6Q8TAG9 804 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 PIM2Q9P1W9 311 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 HDAC5Q9UQL6 1122 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 LAMB2P55268 1798 aa11.64□□□□□ -0.55
ZNF548-206ENST00000597047 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
ZNF548-206ENST00000597047 SRGNP10124 158 aa11.63□□□□□ -0.55
ZNF548-206ENST00000597047 ITGA6P23229 1130 aa11.63□□□□□ -0.55
ZNF548-206ENST00000597047 YY1P25490 414 aa11.63□□□□□ -0.55
ZNF548-206ENST00000597047 ALDH1B1P30837 517 aa11.63□□□□□ -0.55
ZNF548-206ENST00000597047 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
ZNF548-206ENST00000597047 CNKSR1Q969H4 720 aa11.63□□□□□ -0.55
ZNF548-206ENST00000597047 KAZALD1Q96I82 304 aa11.63□□□□□ -0.55
ZNF548-206ENST00000597047 ZNF594Q96JF6 807 aaPredicted RBP11.63□□□□□ -0.55
ZNF548-206ENST00000597047 TMX4Q9H1E5 349 aaPredicted RBP11.63□□□□□ -0.55
ZNF548-206ENST00000597047 UTYO14607 1347 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 MYH3P11055 1940 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 LRP5O75197 1615 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 C21orf2O43822 256 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 KCNA3P22001 575 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
ZNF548-206ENST00000597047 SF3B3Q15393 1217 aaKnown RBP11.62□□□□□ -0.55
ZNF548-206ENST00000597047 STYK1Q6J9G0 422 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 KLHDC4Q8TBB5 520 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 CELF1Q92879 486 aaKnown RBP11.62□□□□□ -0.55
ZNF548-206ENST00000597047 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
ZNF548-206ENST00000597047 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
ZNF548-206ENST00000597047 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
ZNF548-206ENST00000597047 PPEF1O14829 653 aaPredicted RBP11.61□□□□□ -0.55
ZNF548-206ENST00000597047 SRGAP3O43295 1099 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
ZNF548-206ENST00000597047 GRAPQ13588 217 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 PRPF40BQ6NWY9 871 aaKnown RBP11.61□□□□□ -0.55
ZNF548-206ENST00000597047 OLFM4Q6UX06 510 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 GRAPLQ8TC17 118 aaPredicted RBP11.61□□□□□ -0.55
ZNF548-206ENST00000597047 MPHOSPH8Q99549 860 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 PLA2G12BQ9BX93 195 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 SIL1Q9H173 461 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 CNNM1Q9NRU3 951 aa11.61□□□□□ -0.55
ZNF548-206ENST00000597047 SPEF2Q9C093 1822 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 APBB1O00213 710 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 CSF1RP07333 972 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
ZNF548-206ENST00000597047 CRY2Q49AN0 593 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
ZNF548-206ENST00000597047 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
ZNF548-206ENST00000597047 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
ZNF548-206ENST00000597047 KLRG2A4D1S0 409 aaPredicted RBP11.59□□□□□ -0.55
ZNF548-206ENST00000597047 HOXA10P31260 410 aaPredicted RBP11.59□□□□□ -0.55
ZNF548-206ENST00000597047 OS9Q13438 667 aaPredicted RBP11.59□□□□□ -0.55
ZNF548-206ENST00000597047 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
ZNF548-206ENST00000597047 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
ZNF548-206ENST00000597047 PA2G4Q9UQ80 394 aaKnown RBP11.59□□□□□ -0.55
ZNF548-206ENST00000597047 PNMA6EA0A0J9YXQ4 647 aa11.58□□□□□ -0.56
ZNF548-206ENST00000597047 BBOX1O75936 387 aa11.58□□□□□ -0.56
ZNF548-206ENST00000597047 ATP8B2P98198 1209 aa11.58□□□□□ -0.56
ZNF548-206ENST00000597047 HELBQ8NG08 1087 aaPredicted RBP11.58□□□□□ -0.56
ZNF548-206ENST00000597047 PUS3Q9BZE2 481 aaKnown RBP11.58□□□□□ -0.56
ZNF548-206ENST00000597047 ANKIB1Q9P2G1 1089 aa11.58□□□□□ -0.56
ZNF548-206ENST00000597047 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
ZNF548-206ENST00000597047 RIC1Q4ADV7 1423 aa11.58□□□□□ -0.56
ZNF548-206ENST00000597047 YBX3P16989 372 aaKnown RBP eCLIP11.57□□□□□ -0.56
ZNF548-206ENST00000597047 RABL6Q3YEC7 729 aaPredicted RBP11.57□□□□□ -0.56
ZNF548-206ENST00000597047 CEP85Q6P2H3 762 aa11.57□□□□□ -0.56
ZNF548-206ENST00000597047 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
ZNF548-206ENST00000597047 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
ZNF548-206ENST00000597047 TAF5LO75529 589 aa11.56□□□□□ -0.56
ZNF548-206ENST00000597047 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
ZNF548-206ENST00000597047 KCNJ4P48050 445 aa11.56□□□□□ -0.56
ZNF548-206ENST00000597047 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
ZNF548-206ENST00000597047 LRRC24Q50LG9 513 aa11.56□□□□□ -0.56
ZNF548-206ENST00000597047 COL4A1P02462 1669 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 DLEC1Q9Y238 1755 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 HMMRO75330 724 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 GPSM2P81274 684 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 CCDC93Q567U6 631 aa11.55□□□□□ -0.56
ZNF548-206ENST00000597047 METTL24Q5JXM2 366 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms