RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 NLRP10Q86W26 655 aa12.79□□□□□ -0.36
LINC01440-203ENST00000596828 PLBD2Q8NHP8 589 aa12.79□□□□□ -0.36
LINC01440-203ENST00000596828 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
LINC01440-203ENST00000596828 KDM2BQ8NHM5 1336 aa12.79□□□□□ -0.36
LINC01440-203ENST00000596828 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 CRY2Q49AN0 593 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 CCDC93Q567U6 631 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 RIC3Q7Z5B4 369 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 C16orf71Q8IYS4 520 aaPredicted RBP12.78□□□□□ -0.36
LINC01440-203ENST00000596828 C7orf43Q8WVR3 580 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
LINC01440-203ENST00000596828 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
LINC01440-203ENST00000596828 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.37
LINC01440-203ENST00000596828 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
LINC01440-203ENST00000596828 CACNA1FO60840 1977 aa12.77□□□□□ -0.37
LINC01440-203ENST00000596828 RIC1Q4ADV7 1423 aa12.77□□□□□ -0.37
LINC01440-203ENST00000596828 GLTPD2A6NH11 291 aa12.76□□□□□ -0.37
LINC01440-203ENST00000596828 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
LINC01440-203ENST00000596828 NBR1Q14596 966 aa12.76□□□□□ -0.37
LINC01440-203ENST00000596828 TWISTNBQ3B726 338 aaPredicted RBP12.76□□□□□ -0.37
LINC01440-203ENST00000596828 FAM89AQ96GI7 184 aa12.76□□□□□ -0.37
LINC01440-203ENST00000596828 MYD88Q99836 296 aa12.76□□□□□ -0.37
LINC01440-203ENST00000596828 SH3TC1Q8TE82 1336 aa12.76□□□□□ -0.37
LINC01440-203ENST00000596828 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
LINC01440-203ENST00000596828 HOXA10P31260 410 aaPredicted RBP12.75□□□□□ -0.37
LINC01440-203ENST00000596828 FKBP4Q02790 459 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC01440-203ENST00000596828 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
LINC01440-203ENST00000596828 ISCA1Q9BUE6 129 aa12.75□□□□□ -0.37
LINC01440-203ENST00000596828 STK31Q9BXU1 1019 aa12.75□□□□□ -0.37
LINC01440-203ENST00000596828 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
LINC01440-203ENST00000596828 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 ABCC4O15439 1325 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 ZC3H4Q9UPT8 1303 aaKnown RBP12.74□□□□□ -0.37
LINC01440-203ENST00000596828 TOMM70O94826 608 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 RTKN2Q8IZC4 609 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
LINC01440-203ENST00000596828 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 WDR90Q96KV7 1748 aa12.74□□□□□ -0.37
LINC01440-203ENST00000596828 IL16Q14005 1332 aa12.73□□□□□ -0.37
LINC01440-203ENST00000596828 MYH3P11055 1940 aa12.73□□□□□ -0.37
LINC01440-203ENST00000596828 DDNO94850 711 aaPredicted RBP12.73□□□□□ -0.37
LINC01440-203ENST00000596828 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
LINC01440-203ENST00000596828 G2E3Q7L622 706 aa12.73□□□□□ -0.37
LINC01440-203ENST00000596828 WDR63Q8IWG1 891 aa12.73□□□□□ -0.37
LINC01440-203ENST00000596828 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
LINC01440-203ENST00000596828 RNF123Q5XPI4 1314 aa12.72□□□□□ -0.37
LINC01440-203ENST00000596828 DDX58O95786 925 aaKnown RBP12.72□□□□□ -0.37
LINC01440-203ENST00000596828 VEGFAP15692 232 aaPredicted RBP12.72□□□□□ -0.37
LINC01440-203ENST00000596828 IARSP41252 1262 aaKnown RBP12.72□□□□□ -0.37
LINC01440-203ENST00000596828 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
LINC01440-203ENST00000596828 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
LINC01440-203ENST00000596828 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
LINC01440-203ENST00000596828 COL4A1P02462 1669 aa12.71□□□□□ -0.37
LINC01440-203ENST00000596828 PI4KAP2A4QPH2 592 aa12.71□□□□□ -0.37
LINC01440-203ENST00000596828 IRS4O14654 1257 aaPredicted RBP12.71□□□□□ -0.37
LINC01440-203ENST00000596828 HSPA6P17066 643 aa12.71□□□□□ -0.37
LINC01440-203ENST00000596828 PI4KAP1Q8N8J0 262 aa12.71□□□□□ -0.37
LINC01440-203ENST00000596828 CHMP4AQ9BY43 222 aa12.71□□□□□ -0.37
LINC01440-203ENST00000596828 COL4A5P29400 1685 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 ZNF541Q9H0D2 1346 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 SCN4AP35499 1836 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 POTECB2RU33 542 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 RBM46Q8TBY0 533 aaKnown RBP12.7□□□□□ -0.38
LINC01440-203ENST00000596828 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
LINC01440-203ENST00000596828 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
LINC01440-203ENST00000596828 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
LINC01440-203ENST00000596828 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
LINC01440-203ENST00000596828 KSR2Q6VAB6 950 aa12.69□□□□□ -0.38
LINC01440-203ENST00000596828 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
LINC01440-203ENST00000596828 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
LINC01440-203ENST00000596828 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
LINC01440-203ENST00000596828 PSMD1Q99460 953 aa12.69□□□□□ -0.38
LINC01440-203ENST00000596828 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
LINC01440-203ENST00000596828 LRRC37AA6NMS7 1700 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 VAMP4O75379 141 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 BBOX1O75936 387 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
LINC01440-203ENST00000596828 GRAPQ13588 217 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 AOC3Q16853 763 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
LINC01440-203ENST00000596828 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
LINC01440-203ENST00000596828 CCDC191Q8NCU4 936 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 GRAPLQ8TC17 118 aaPredicted RBP12.68□□□□□ -0.38
LINC01440-203ENST00000596828 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
LINC01440-203ENST00000596828 MYH16Q9H6N6 1097 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 GJA3Q9Y6H8 435 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
LINC01440-203ENST00000596828 PPIP5K2O43314 1243 aa12.67□□□□□ -0.38
LINC01440-203ENST00000596828 IGKV5-2P06315 115 aa12.67□□□□□ -0.38
LINC01440-203ENST00000596828 HTRA3P83110 453 aa12.67□□□□□ -0.38
LINC01440-203ENST00000596828 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
LINC01440-203ENST00000596828 FLIIQ13045 1269 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms