RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 TCEANC2Q96MN5 208 aa27.22■■□□□ 1.95
SRRM1-222ENST00000596378 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.22■■□□□ 1.95
SRRM1-222ENST00000596378 SYT1P21579 422 aa27.22■■□□□ 1.95
SRRM1-222ENST00000596378 SYCE3A1L190 88 aa27.21■■□□□ 1.95
SRRM1-222ENST00000596378 GADD45BO75293 160 aaPredicted RBP27.21■■□□□ 1.95
SRRM1-222ENST00000596378 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
SRRM1-222ENST00000596378 ME3Q16798 604 aa27.21■■□□□ 1.95
SRRM1-222ENST00000596378 NECAB1Q8N987 351 aa27.21■■□□□ 1.95
SRRM1-222ENST00000596378 RBSNQ9H1K0 784 aa27.21■■□□□ 1.95
SRRM1-222ENST00000596378 ZNF330Q9Y3S2 320 aaPredicted RBP27.21■■□□□ 1.95
SRRM1-222ENST00000596378 STX6O43752 255 aa27.19■■□□□ 1.94
SRRM1-222ENST00000596378 DDX46Q7L014 1031 aaKnown RBP27.19■■□□□ 1.94
SRRM1-222ENST00000596378 ATG9AQ7Z3C6 839 aa27.19■■□□□ 1.94
SRRM1-222ENST00000596378 MBD3O95983 291 aa27.19■■□□□ 1.94
SRRM1-222ENST00000596378 ZSCAN22P10073 491 aaPredicted RBP27.19■■□□□ 1.94
SRRM1-222ENST00000596378 GJB2P29033 226 aa27.19■■□□□ 1.94
SRRM1-222ENST00000596378 CCDC129Q6ZRS4 1044 aa27.19■■□□□ 1.94
SRRM1-222ENST00000596378 USP48Q86UV5 1035 aa27.19■■□□□ 1.94
SRRM1-222ENST00000596378 ZNF594Q96JF6 807 aaPredicted RBP27.19■■□□□ 1.94
SRRM1-222ENST00000596378 SEC62Q99442 399 aaKnown RBP27.19■■□□□ 1.94
SRRM1-222ENST00000596378 TPCN1Q9ULQ1 816 aa27.19■■□□□ 1.94
SRRM1-222ENST00000596378 TAF5LO75529 589 aa27.18■■□□□ 1.94
SRRM1-222ENST00000596378 TNS2Q63HR2 1409 aa27.18■■□□□ 1.94
SRRM1-222ENST00000596378 ZNF609O15014 1411 aa27.17■■□□□ 1.94
SRRM1-222ENST00000596378 NEUROD6Q96NK8 337 aa27.17■■□□□ 1.94
SRRM1-222ENST00000596378 CNPY2Q9Y2B0 182 aa27.17■■□□□ 1.94
SRRM1-222ENST00000596378 JCADQ9P266 1359 aa27.16■■□□□ 1.94
SRRM1-222ENST00000596378 TPRNQ4KMQ1 711 aa27.16■■□□□ 1.94
SRRM1-222ENST00000596378 LRRC24Q50LG9 513 aa27.16■■□□□ 1.94
SRRM1-222ENST00000596378 HAUS7Q99871 368 aa27.16■■□□□ 1.94
SRRM1-222ENST00000596378 TIMM10P62072 90 aa27.16■■□□□ 1.94
SRRM1-222ENST00000596378 ZSCAN31Q96LW9 406 aaPredicted RBP27.16■■□□□ 1.94
SRRM1-222ENST00000596378 SH2B1Q9NRF2 756 aaPredicted RBP27.16■■□□□ 1.94
SRRM1-222ENST00000596378 TMOD3Q9NYL9 352 aa27.16■■□□□ 1.94
SRRM1-222ENST00000596378 RNF20Q5VTR2 975 aa27.15■■□□□ 1.94
SRRM1-222ENST00000596378 CCDC191Q8NCU4 936 aa27.15■■□□□ 1.94
SRRM1-222ENST00000596378 PSMA5P28066 241 aa27.15■■□□□ 1.94
SRRM1-222ENST00000596378 SLFNL1Q499Z3 407 aa27.15■■□□□ 1.94
SRRM1-222ENST00000596378 BLOC1S2Q6QNY1 142 aa27.15■■□□□ 1.94
SRRM1-222ENST00000596378 ASAP1Q9ULH1 1129 aa27.15■■□□□ 1.94
SRRM1-222ENST00000596378 F13A1P00488 732 aa27.14■■□□□ 1.94
SRRM1-222ENST00000596378 LRSAM1Q6UWE0 723 aa27.14■■□□□ 1.94
SRRM1-222ENST00000596378 TRIM44Q96DX7 344 aaPredicted RBP27.13■■□□□ 1.93
SRRM1-222ENST00000596378 KDM4FA0A1W2PPD8 638 aa27.13■■□□□ 1.93
SRRM1-222ENST00000596378 CCDC173Q0VFZ6 552 aa27.12■■□□□ 1.93
SRRM1-222ENST00000596378 PUS3Q9BZE2 481 aaKnown RBP27.12■■□□□ 1.93
SRRM1-222ENST00000596378 RPS6KB1P23443 525 aa27.12■■□□□ 1.93
SRRM1-222ENST00000596378 DNAJC10Q8IXB1 793 aa27.11■■□□□ 1.93
SRRM1-222ENST00000596378 GOLIM4O00461 696 aa27.11■■□□□ 1.93
SRRM1-222ENST00000596378 PIGBQ92521 554 aa27.11■■□□□ 1.93
SRRM1-222ENST00000596378 BTG4Q9NY30 223 aa27.11■■□□□ 1.93
SRRM1-222ENST00000596378 MTMR6Q9Y217 621 aa27.11■■□□□ 1.93
SRRM1-222ENST00000596378 TOB2Q14106 344 aaPredicted RBP27.1■■□□□ 1.93
SRRM1-222ENST00000596378 CCDC85AQ96PX6 553 aaPredicted RBP27.1■■□□□ 1.93
SRRM1-222ENST00000596378 PPP1R9BQ96SB3 815 aa27.1■■□□□ 1.93
SRRM1-222ENST00000596378 NHSL1Q5SYE7 1610 aa27.1■■□□□ 1.93
SRRM1-222ENST00000596378 EYA2O00167 538 aa27.1■■□□□ 1.93
SRRM1-222ENST00000596378 IL15P40933 162 aaPredicted RBP27.1■■□□□ 1.93
SRRM1-222ENST00000596378 USPL1Q5W0Q7 1092 aa27.1■■□□□ 1.93
SRRM1-222ENST00000596378 VPS37CA5D8V6 355 aaPredicted RBP27.09■■□□□ 1.93
SRRM1-222ENST00000596378 KBTBD3Q8NAB2 608 aa27.09■■□□□ 1.93
SRRM1-222ENST00000596378 ANP32BQ92688 251 aaKnown RBP27.09■■□□□ 1.93
SRRM1-222ENST00000596378 HMG20BQ9P0W2 317 aa27.09■■□□□ 1.93
SRRM1-222ENST00000596378 FIBPO43427 364 aa27.08■■□□□ 1.93
SRRM1-222ENST00000596378 MCMDC2Q4G0Z9 681 aa27.08■■□□□ 1.93
SRRM1-222ENST00000596378 ISCA1Q9BUE6 129 aa27.08■■□□□ 1.93
SRRM1-222ENST00000596378 ESPNB1AK53 854 aa27.08■■□□□ 1.93
SRRM1-222ENST00000596378 TMEM87AQ8NBN3 555 aa27.08■■□□□ 1.93
SRRM1-222ENST00000596378 RFX7Q2KHR2 1363 aa27.08■■□□□ 1.93
SRRM1-222ENST00000596378 STK3Q13188 491 aa27.07■■□□□ 1.92
SRRM1-222ENST00000596378 PAG1Q9NWQ8 432 aa27.07■■□□□ 1.92
SRRM1-222ENST00000596378 TCIRG1Q13488 830 aa27.07■■□□□ 1.92
SRRM1-222ENST00000596378 DNM1Q05193 864 aaKnown RBP27.06■■□□□ 1.92
SRRM1-222ENST00000596378 TSGA10IPQ3SY00 556 aa27.06■■□□□ 1.92
SRRM1-222ENST00000596378 RNF214Q8ND24 703 aa27.06■■□□□ 1.92
SRRM1-222ENST00000596378 A0A1B0GUL7 405 aa27.06■■□□□ 1.92
SRRM1-222ENST00000596378 FAM89AQ96GI7 184 aa27.06■■□□□ 1.92
SRRM1-222ENST00000596378 ATG3Q9NT62 314 aa27.06■■□□□ 1.92
SRRM1-222ENST00000596378 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.06■■□□□ 1.92
SRRM1-222ENST00000596378 KAT6BQ8WYB5 2073 aa27.05■■□□□ 1.92
SRRM1-222ENST00000596378 CYP21A2P08686 494 aa27.05■■□□□ 1.92
SRRM1-222ENST00000596378 GPR108Q9NPR9 543 aa27.05■■□□□ 1.92
SRRM1-222ENST00000596378 ANKRD1Q15327 319 aa27.04■■□□□ 1.92
SRRM1-222ENST00000596378 ITGB4P16144 1822 aa27.04■■□□□ 1.92
SRRM1-222ENST00000596378 CLCN1P35523 988 aa27.04■■□□□ 1.92
SRRM1-222ENST00000596378 SYNE4Q8N205 404 aa27.04■■□□□ 1.92
SRRM1-222ENST00000596378 SYAP1Q96A49 352 aaPredicted RBP27.04■■□□□ 1.92
SRRM1-222ENST00000596378 NEK1Q96PY6 1258 aa27.04■■□□□ 1.92
SRRM1-222ENST00000596378 U3KPZ7 1027 aaPredicted RBP27.04■■□□□ 1.92
SRRM1-222ENST00000596378 PALLDQ8WX93 1383 aa27.03■■□□□ 1.92
SRRM1-222ENST00000596378 LARP1BQ659C4 914 aaKnown RBP27.03■■□□□ 1.92
SRRM1-222ENST00000596378 ATP6V1DQ9Y5K8 247 aa27.03■■□□□ 1.92
SRRM1-222ENST00000596378 SH3TC1Q8TE82 1336 aa27.03■■□□□ 1.92
SRRM1-222ENST00000596378 KIF6Q6ZMV9 814 aa27.02■■□□□ 1.92
SRRM1-222ENST00000596378 IFIT1P09914 478 aaKnown RBP27.02■■□□□ 1.92
SRRM1-222ENST00000596378 CCDC57Q2TAC2 916 aa27.02■■□□□ 1.92
SRRM1-222ENST00000596378 CDC37L1Q7L3B6 337 aa27.02■■□□□ 1.92
SRRM1-222ENST00000596378 FERMT3Q86UX7 667 aa27.02■■□□□ 1.92
SRRM1-222ENST00000596378 ALDH8A1Q9H2A2 487 aaPredicted RBP27.02■■□□□ 1.92
SRRM1-222ENST00000596378 CIAO1O76071 339 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms