RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RIOK3O14730 519 aaKnown RBP15.66■□□□□ 0.1
VRK3-209ENST00000594948 TAF5LO75529 589 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 ZNF75DP51815 510 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 RESTQ13127 1097 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 ANO6Q4KMQ2 910 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 MPRIPQ6WCQ1 1025 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 TICAM2Q86XR7 235 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 SPC24Q8NBT2 197 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 GTF3C6Q969F1 213 aa15.66■□□□□ 0.1
VRK3-209ENST00000594948 PTGS1P23219 599 aa15.65■□□□□ 0.1
VRK3-209ENST00000594948 CEBPAP49715 358 aaPredicted RBP15.65■□□□□ 0.1
VRK3-209ENST00000594948 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
VRK3-209ENST00000594948 CFAP45Q9UL16 551 aa15.65■□□□□ 0.1
VRK3-209ENST00000594948 ATP5JP18859 108 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 C14orf37Q86TY3 774 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 LUZP1Q86V48 1076 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 LLPHQ9BRT6 129 aaKnown RBP15.64■□□□□ 0.09
VRK3-209ENST00000594948 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
VRK3-209ENST00000594948 ABCC6O95255 1503 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 SMTNL1A8MU46 457 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 CTAGE5O15320 804 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 DMTNQ08495 405 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 SARM1Q6SZW1 724 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 BOLA2Q9H3K6 86 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 COPRSQ9NQ92 184 aa15.64■□□□□ 0.09
VRK3-209ENST00000594948 ARFGEF2Q9Y6D5 1785 aa15.63■□□□□ 0.09
VRK3-209ENST00000594948 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
VRK3-209ENST00000594948 CAMK4Q16566 473 aa15.63■□□□□ 0.09
VRK3-209ENST00000594948 ATL3Q6DD88 541 aa15.63■□□□□ 0.09
VRK3-209ENST00000594948 CCDC186Q7Z3E2 898 aa15.63■□□□□ 0.09
VRK3-209ENST00000594948 PDCL2Q8N4E4 241 aa15.63■□□□□ 0.09
VRK3-209ENST00000594948 SPEF2Q9C093 1822 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 RGPD5Q99666 1765 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 NEMFO60524 1076 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 PDIA6Q15084 440 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 ZSCAN25Q6NSZ9 544 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 FAM173BQ6P4H8 233 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 SMARCC2Q8TAQ2 1214 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 DDX54Q8TDD1 881 aaKnown RBP15.62■□□□□ 0.09
VRK3-209ENST00000594948 PGBD1Q96JS3 809 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 NEK1Q96PY6 1258 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 GTPBP4Q9BZE4 634 aaKnown RBP15.62■□□□□ 0.09
VRK3-209ENST00000594948 TLR7Q9NYK1 1049 aaKnown RBP15.62■□□□□ 0.09
VRK3-209ENST00000594948 PAXBP1Q9Y5B6 917 aa15.62■□□□□ 0.09
VRK3-209ENST00000594948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.62■□□□□ 0.09
VRK3-209ENST00000594948 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 ZNF165P49910 485 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 PPP4R3BQ5MIZ7 849 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 ZNF589Q86UQ0 364 aaPredicted RBP15.61■□□□□ 0.09
VRK3-209ENST00000594948 ARHGEF25Q86VW2 580 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 CKAP2LQ8IYA6 745 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 TSC1Q92574 1164 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 TRIM5Q9C035 493 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 KIF1AQ12756 1690 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 LAMB4A4D0S4 1761 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 NEURL1BA8MQ27 555 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 HMGB1P09429 215 aaKnown RBP15.61■□□□□ 0.09
VRK3-209ENST00000594948 NAA16Q6N069 864 aaPredicted RBP15.61■□□□□ 0.09
VRK3-209ENST00000594948 BICD2Q8TD16 824 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
VRK3-209ENST00000594948 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
VRK3-209ENST00000594948 FEZ1Q99689 392 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 TFIP11Q9UBB9 837 aaKnown RBP15.61■□□□□ 0.09
VRK3-209ENST00000594948 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
VRK3-209ENST00000594948 NR1I2O75469 434 aa15.6■□□□□ 0.09
VRK3-209ENST00000594948 GCKRQ14397 625 aa15.6■□□□□ 0.09
VRK3-209ENST00000594948 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
VRK3-209ENST00000594948 BRF1Q92994 677 aa15.6■□□□□ 0.09
VRK3-209ENST00000594948 CHMP4CQ96CF2 233 aa15.6■□□□□ 0.09
VRK3-209ENST00000594948 MRFAP1L1Q96HT8 127 aa15.6■□□□□ 0.09
VRK3-209ENST00000594948 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
VRK3-209ENST00000594948 ZBTB7CA1YPR0 619 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 ZSCAN20P17040 1043 aaPredicted RBP15.59■□□□□ 0.09
VRK3-209ENST00000594948 COL9A3Q14050 684 aaPredicted RBP15.59■□□□□ 0.09
VRK3-209ENST00000594948 DRC7Q8IY82 874 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 TCEANC2Q96MN5 208 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 METTL22Q9BUU2 404 aaPredicted RBP15.59■□□□□ 0.09
VRK3-209ENST00000594948 RCOR1Q9UKL0 485 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 CHMP3Q9Y3E7 222 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 TAF6LQ9Y6J9 622 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 SH3TC1Q8TE82 1336 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 ZNF609O15014 1411 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 PFKFB2O60825 505 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
VRK3-209ENST00000594948 PSME1Q06323 249 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 IQCB1Q15051 598 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 RABL6Q3YEC7 729 aaPredicted RBP15.59■□□□□ 0.09
VRK3-209ENST00000594948 TNNI3KQ59H18 835 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 FPGT-TNNI3KV9GXZ4 949 aa15.59■□□□□ 0.09
VRK3-209ENST00000594948 PALLDQ8WX93 1383 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 H3BQV1 296 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 DTNBO60941 627 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 STX1AQ16623 288 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 MCMDC2Q4G0Z9 681 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 IFFO2Q5TF58 517 aa15.58■□□□□ 0.08
VRK3-209ENST00000594948 Q6ZUG5 572 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms