RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 DPY19L2Q6NUT2 758 aa20.34■□□□□ 0.85
USHBP1-204ENST00000594190 CLUAP1Q96AJ1 413 aa20.34■□□□□ 0.85
USHBP1-204ENST00000594190 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
USHBP1-204ENST00000594190 COG6Q9Y2V7 657 aa20.34■□□□□ 0.85
USHBP1-204ENST00000594190 DDX60Q8IY21 1712 aaKnown RBP20.33■□□□□ 0.85
USHBP1-204ENST00000594190 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.85
USHBP1-204ENST00000594190 ANXA1P04083 346 aa20.33■□□□□ 0.85
USHBP1-204ENST00000594190 RLBP1P12271 317 aa20.33■□□□□ 0.85
USHBP1-204ENST00000594190 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.85
USHBP1-204ENST00000594190 GPTP24298 496 aa20.33■□□□□ 0.85
USHBP1-204ENST00000594190 FLIIQ13045 1269 aa20.33■□□□□ 0.85
USHBP1-204ENST00000594190 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.85
USHBP1-204ENST00000594190 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
USHBP1-204ENST00000594190 TAF1P21675 1872 aa20.32■□□□□ 0.84
USHBP1-204ENST00000594190 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
USHBP1-204ENST00000594190 SLC10A5Q5PT55 438 aa20.31■□□□□ 0.84
USHBP1-204ENST00000594190 SLC51AQ86UW1 340 aa20.31■□□□□ 0.84
USHBP1-204ENST00000594190 ITPRIPQ8IWB1 547 aa20.31■□□□□ 0.84
USHBP1-204ENST00000594190 TMEM57Q8N5G2 664 aa20.31■□□□□ 0.84
USHBP1-204ENST00000594190 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
USHBP1-204ENST00000594190 DDX21Q9NR30 783 aaKnown RBP eCLIP20.31■□□□□ 0.84
USHBP1-204ENST00000594190 CCT4P50991 539 aaKnown RBP20.3■□□□□ 0.84
USHBP1-204ENST00000594190 PARP10Q53GL7 1025 aa20.3■□□□□ 0.84
USHBP1-204ENST00000594190 INTS3Q68E01 1043 aaKnown RBP20.3■□□□□ 0.84
USHBP1-204ENST00000594190 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
USHBP1-204ENST00000594190 PSMD1Q99460 953 aa20.3■□□□□ 0.84
USHBP1-204ENST00000594190 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
USHBP1-204ENST00000594190 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
USHBP1-204ENST00000594190 COPS6Q7L5N1 327 aa20.29■□□□□ 0.84
USHBP1-204ENST00000594190 CRAMP1Q96RY5 1269 aa20.29■□□□□ 0.84
USHBP1-204ENST00000594190 ZNF277Q9NRM2 450 aaPredicted RBP20.29■□□□□ 0.84
USHBP1-204ENST00000594190 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
USHBP1-204ENST00000594190 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
USHBP1-204ENST00000594190 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
USHBP1-204ENST00000594190 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
USHBP1-204ENST00000594190 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
USHBP1-204ENST00000594190 LRRC37AA6NMS7 1700 aa20.27■□□□□ 0.84
USHBP1-204ENST00000594190 FZD9O00144 591 aa20.27■□□□□ 0.84
USHBP1-204ENST00000594190 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
USHBP1-204ENST00000594190 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.84
USHBP1-204ENST00000594190 TNNQ9UQP3 1299 aa20.27■□□□□ 0.84
USHBP1-204ENST00000594190 POTEIP0CG38 1075 aa20.26■□□□□ 0.83
USHBP1-204ENST00000594190 POTEJP0CG39 1038 aa20.26■□□□□ 0.83
USHBP1-204ENST00000594190 IARSP41252 1262 aaKnown RBP20.26■□□□□ 0.83
USHBP1-204ENST00000594190 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
USHBP1-204ENST00000594190 G2E3Q7L622 706 aa20.26■□□□□ 0.83
USHBP1-204ENST00000594190 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
USHBP1-204ENST00000594190 SYNE4Q8N205 404 aa20.26■□□□□ 0.83
USHBP1-204ENST00000594190 TCIRG1Q13488 830 aa20.25■□□□□ 0.83
USHBP1-204ENST00000594190 CC2D2BQ6DHV5 1058 aa20.25■□□□□ 0.83
USHBP1-204ENST00000594190 UTP14AQ9BVJ6 771 aaKnown RBP20.25■□□□□ 0.83
USHBP1-204ENST00000594190 COL4A1P02462 1669 aa20.24■□□□□ 0.83
USHBP1-204ENST00000594190 RPGRQ92834 1020 aaKnown RBP20.23■□□□□ 0.83
USHBP1-204ENST00000594190 ZBTB40Q9NUA8 1239 aa20.23■□□□□ 0.83
USHBP1-204ENST00000594190 ZBTB7BO15156 539 aaPredicted RBP20.22■□□□□ 0.83
USHBP1-204ENST00000594190 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
USHBP1-204ENST00000594190 GRIPAP1Q4V328 841 aa20.22■□□□□ 0.83
USHBP1-204ENST00000594190 HSP90AB3PQ58FF7 597 aa20.22■□□□□ 0.83
USHBP1-204ENST00000594190 CHADLQ6NUI6 762 aa20.22■□□□□ 0.83
USHBP1-204ENST00000594190 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
USHBP1-204ENST00000594190 RBM17Q96I25 401 aaKnown RBP20.22■□□□□ 0.83
USHBP1-204ENST00000594190 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
USHBP1-204ENST00000594190 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
USHBP1-204ENST00000594190 TAF1DQ9H5J8 278 aaPredicted RBP20.22■□□□□ 0.83
USHBP1-204ENST00000594190 CREBZFQ9NS37 354 aa20.22■□□□□ 0.83
USHBP1-204ENST00000594190 DUOX1Q9NRD9 1551 aa20.21■□□□□ 0.83
USHBP1-204ENST00000594190 PPEF1O14829 653 aaPredicted RBP20.21■□□□□ 0.83
USHBP1-204ENST00000594190 KSR2Q6VAB6 950 aa20.21■□□□□ 0.83
USHBP1-204ENST00000594190 PLBD2Q8NHP8 589 aa20.21■□□□□ 0.83
USHBP1-204ENST00000594190 PHAXQ9H814 394 aaKnown RBP20.21■□□□□ 0.83
USHBP1-204ENST00000594190 DNAAF4Q8WXU2 420 aa20.2■□□□□ 0.82
USHBP1-204ENST00000594190 MKRN1Q9UHC7 482 aaKnown RBP20.2■□□□□ 0.82
USHBP1-204ENST00000594190 ATP6V0A2Q9Y487 856 aa20.2■□□□□ 0.82
USHBP1-204ENST00000594190 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
USHBP1-204ENST00000594190 IQCA1LA6NCM1 817 aa20.19■□□□□ 0.82
USHBP1-204ENST00000594190 RTFDC1Q9BY42 306 aaPredicted RBP20.19■□□□□ 0.82
USHBP1-204ENST00000594190 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
USHBP1-204ENST00000594190 HDAC5Q9UQL6 1122 aa20.19■□□□□ 0.82
USHBP1-204ENST00000594190 PI4KAP2A4QPH2 592 aa20.18■□□□□ 0.82
USHBP1-204ENST00000594190 GNAI3P08754 354 aa20.18■□□□□ 0.82
USHBP1-204ENST00000594190 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
USHBP1-204ENST00000594190 ANKRD13DQ6ZTN6 518 aa20.18■□□□□ 0.82
USHBP1-204ENST00000594190 GPC2Q8N158 579 aa20.18■□□□□ 0.82
USHBP1-204ENST00000594190 PI4KAP1Q8N8J0 262 aa20.18■□□□□ 0.82
USHBP1-204ENST00000594190 F6X3S4 739 aa20.17■□□□□ 0.82
USHBP1-204ENST00000594190 ALDH1L1O75891 902 aa20.17■□□□□ 0.82
USHBP1-204ENST00000594190 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
USHBP1-204ENST00000594190 LDHDQ86WU2 507 aa20.17■□□□□ 0.82
USHBP1-204ENST00000594190 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
USHBP1-204ENST00000594190 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
USHBP1-204ENST00000594190 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
USHBP1-204ENST00000594190 NEXNQ0ZGT2 675 aa20.16■□□□□ 0.82
USHBP1-204ENST00000594190 TRIM28Q13263 835 aaKnown RBP20.16■□□□□ 0.82
USHBP1-204ENST00000594190 HDAC1Q13547 482 aaPredicted RBP20.16■□□□□ 0.82
USHBP1-204ENST00000594190 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
USHBP1-204ENST00000594190 VPS33BQ9H267 617 aa20.15■□□□□ 0.82
USHBP1-204ENST00000594190 HACL1Q9UJ83 578 aa20.15■□□□□ 0.82
USHBP1-204ENST00000594190 BBOX1O75936 387 aa20.14■□□□□ 0.81
USHBP1-204ENST00000594190 SCNN1DP51172 638 aa20.14■□□□□ 0.81
USHBP1-204ENST00000594190 BEND3Q5T5X7 828 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms