RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 CD2APQ9Y5K6 639 aa23.57■■□□□ 1.36
ARHGEF1-205ENST00000593609 CEP85Q6P2H3 762 aa23.56■■□□□ 1.36
ARHGEF1-205ENST00000593609 C3orf67Q6ZVT6 689 aa23.56■■□□□ 1.36
ARHGEF1-205ENST00000593609 TNRC6CQ9HCJ0 1690 aaKnown RBP23.56■■□□□ 1.36
ARHGEF1-205ENST00000593609 ANKRD31Q8N7Z5 1873 aa23.55■■□□□ 1.36
ARHGEF1-205ENST00000593609 KIF13BQ9NQT8 1826 aa23.54■■□□□ 1.36
ARHGEF1-205ENST00000593609 HOXA10P31260 410 aaPredicted RBP23.54■■□□□ 1.36
ARHGEF1-205ENST00000593609 ATP8B2P98198 1209 aa23.54■■□□□ 1.36
ARHGEF1-205ENST00000593609 MYH3P11055 1940 aa23.54■■□□□ 1.36
ARHGEF1-205ENST00000593609 HMMRO75330 724 aa23.53■■□□□ 1.36
ARHGEF1-205ENST00000593609 SRGNP10124 158 aa23.53■■□□□ 1.36
ARHGEF1-205ENST00000593609 TGFB2P61812 414 aa23.53■■□□□ 1.36
ARHGEF1-205ENST00000593609 H0YIN7 160 aa23.52■■□□□ 1.36
ARHGEF1-205ENST00000593609 NPR1P16066 1061 aa23.52■■□□□ 1.36
ARHGEF1-205ENST00000593609 IFIT5Q13325 482 aaKnown RBP23.52■■□□□ 1.36
ARHGEF1-205ENST00000593609 FAM161AQ3B820 660 aa23.52■■□□□ 1.36
ARHGEF1-205ENST00000593609 SSH3Q8TE77 659 aa23.52■■□□□ 1.36
ARHGEF1-205ENST00000593609 RPGRQ92834 1020 aaKnown RBP23.52■■□□□ 1.36
ARHGEF1-205ENST00000593609 GREM2Q9H772 168 aa23.52■■□□□ 1.36
ARHGEF1-205ENST00000593609 SRGAP3O43295 1099 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 POLA2Q14181 598 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 CCDC57Q2TAC2 916 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 STYK1Q6J9G0 422 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 DDX46Q7L014 1031 aaKnown RBP23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 C2CD5Q86YS7 1000 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 CRAMP1Q96RY5 1269 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 CHMP3Q9Y3E7 222 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 PCDHB15Q9Y5E8 787 aa23.51■■□□□ 1.35
ARHGEF1-205ENST00000593609 ANKRD18BA2A2Z9 1011 aa23.5■■□□□ 1.35
ARHGEF1-205ENST00000593609 MASTLQ96GX5 879 aa23.5■■□□□ 1.35
ARHGEF1-205ENST00000593609 RBM17Q96I25 401 aaKnown RBP23.5■■□□□ 1.35
ARHGEF1-205ENST00000593609 CDC5LQ99459 802 aaKnown RBP23.5■■□□□ 1.35
ARHGEF1-205ENST00000593609 LRP5O75197 1615 aa23.5■■□□□ 1.35
ARHGEF1-205ENST00000593609 PNMA6EA0A0J9YXQ4 647 aa23.49■■□□□ 1.35
ARHGEF1-205ENST00000593609 ITGA6P23229 1130 aa23.49■■□□□ 1.35
ARHGEF1-205ENST00000593609 SIRT2Q8IXJ6 389 aa23.49■■□□□ 1.35
ARHGEF1-205ENST00000593609 RFX5P48382 616 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF1-205ENST00000593609 CCDC85AQ96PX6 553 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF1-205ENST00000593609 PPP1R1BQ9UD71 204 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF1-205ENST00000593609 ALDH1B1P30837 517 aa23.47■■□□□ 1.35
ARHGEF1-205ENST00000593609 HDAC1Q13547 482 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF1-205ENST00000593609 COPRSQ9NQ92 184 aa23.47■■□□□ 1.35
ARHGEF1-205ENST00000593609 FBXO3Q9UK99 471 aa23.47■■□□□ 1.35
ARHGEF1-205ENST00000593609 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF1-205ENST00000593609 GRAPQ13588 217 aa23.46■■□□□ 1.35
ARHGEF1-205ENST00000593609 GRAPLQ8TC17 118 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF1-205ENST00000593609 CNKSR1Q969H4 720 aa23.46■■□□□ 1.35
ARHGEF1-205ENST00000593609 SEC31BQ9NQW1 1179 aa23.46■■□□□ 1.35
ARHGEF1-205ENST00000593609 BBOX1O75936 387 aa23.45■■□□□ 1.34
ARHGEF1-205ENST00000593609 DPEP1P16444 411 aa23.45■■□□□ 1.34
ARHGEF1-205ENST00000593609 CHRNA5P30532 468 aa23.45■■□□□ 1.34
ARHGEF1-205ENST00000593609 PTPN12Q05209 780 aaKnown RBP23.45■■□□□ 1.34
ARHGEF1-205ENST00000593609 TMC4Q7Z404 712 aa23.45■■□□□ 1.34
ARHGEF1-205ENST00000593609 ANKRD18AQ8IVF6 992 aa23.45■■□□□ 1.34
ARHGEF1-205ENST00000593609 KIAA1551Q9HCM1 1747 aa23.45■■□□□ 1.34
ARHGEF1-205ENST00000593609 IGHMBP2P38935 993 aaKnown RBP23.44■■□□□ 1.34
ARHGEF1-205ENST00000593609 RPS8P62241 208 aaKnown RBP23.44■■□□□ 1.34
ARHGEF1-205ENST00000593609 TAF7LQ5H9L4 462 aa23.44■■□□□ 1.34
ARHGEF1-205ENST00000593609 RWDD1Q9H446 243 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF1-205ENST00000593609 NOP58Q9Y2X3 529 aaKnown RBP23.44■■□□□ 1.34
ARHGEF1-205ENST00000593609 DLEC1Q9Y238 1755 aa23.44■■□□□ 1.34
ARHGEF1-205ENST00000593609 KCNA3P22001 575 aa23.43■■□□□ 1.34
ARHGEF1-205ENST00000593609 KLHL34Q8N239 644 aa23.43■■□□□ 1.34
ARHGEF1-205ENST00000593609 CELF1Q92879 486 aaKnown RBP23.43■■□□□ 1.34
ARHGEF1-205ENST00000593609 ZNF622Q969S3 477 aaKnown RBP eCLIP23.43■■□□□ 1.34
ARHGEF1-205ENST00000593609 FHDC1Q9C0D6 1143 aaPredicted RBP23.43■■□□□ 1.34
ARHGEF1-205ENST00000593609 A0A0G2JLW4 131 aa23.42■■□□□ 1.34
ARHGEF1-205ENST00000593609 CIAO1O76071 339 aa23.42■■□□□ 1.34
ARHGEF1-205ENST00000593609 BSDC1Q9NW68 430 aaPredicted RBP23.42■■□□□ 1.34
ARHGEF1-205ENST00000593609 HSP90AB4PQ58FF6 505 aa23.41■■□□□ 1.34
ARHGEF1-205ENST00000593609 LDHAL6AQ6ZMR3 332 aa23.41■■□□□ 1.34
ARHGEF1-205ENST00000593609 MPHOSPH8Q99549 860 aa23.41■■□□□ 1.34
ARHGEF1-205ENST00000593609 PPP4R2Q9NY27 417 aa23.41■■□□□ 1.34
ARHGEF1-205ENST00000593609 PIM2Q9P1W9 311 aa23.41■■□□□ 1.34
ARHGEF1-205ENST00000593609 EYA2O00167 538 aa23.4■■□□□ 1.34
ARHGEF1-205ENST00000593609 TTLL6Q8N841 843 aa23.4■■□□□ 1.34
ARHGEF1-205ENST00000593609 ZNF594Q96JF6 807 aaPredicted RBP23.4■■□□□ 1.34
ARHGEF1-205ENST00000593609 DCTPP1Q9H773 170 aa23.4■■□□□ 1.34
ARHGEF1-205ENST00000593609 SURF6O75683 361 aaKnown RBP23.39■■□□□ 1.33
ARHGEF1-205ENST00000593609 PRPF40BQ6NWY9 871 aaKnown RBP23.39■■□□□ 1.33
ARHGEF1-205ENST00000593609 KLHDC4Q8TBB5 520 aa23.39■■□□□ 1.33
ARHGEF1-205ENST00000593609 SYT17Q9BSW7 474 aa23.39■■□□□ 1.33
ARHGEF1-205ENST00000593609 PA2G4Q9UQ80 394 aaKnown RBP23.39■■□□□ 1.33
ARHGEF1-205ENST00000593609 PPEF1O14829 653 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF1-205ENST00000593609 IL15P40933 162 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF1-205ENST00000593609 CNNM1Q9NRU3 951 aa23.38■■□□□ 1.33
ARHGEF1-205ENST00000593609 G3BP1Q13283 466 aaKnown RBP eCLIP23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 ERC1Q8IUD2 1116 aa23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 NLGN2Q8NFZ4 835 aa23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 GCC1Q96CN9 775 aa23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 ATP6V0A2Q9Y487 856 aa23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 RIPOR2Q9Y4F9 1068 aa23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 COL4A1P02462 1669 aa23.37■■□□□ 1.33
ARHGEF1-205ENST00000593609 MROH5Q6ZUA9 1318 aa23.36■■□□□ 1.33
ARHGEF1-205ENST00000593609 RAB11FIP3O75154 756 aa23.36■■□□□ 1.33
ARHGEF1-205ENST00000593609 DALRD3Q5D0E6 543 aaKnown RBP23.36■■□□□ 1.33
ARHGEF1-205ENST00000593609 CC2D2BQ6DHV5 1058 aa23.36■■□□□ 1.33
ARHGEF1-205ENST00000593609 ATG9AQ7Z3C6 839 aa23.36■■□□□ 1.33
ARHGEF1-205ENST00000593609 SIL1Q9H173 461 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms