RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 FOXD4L6Q3SYB3 417 aaPredicted RBP19.83■□□□□ 0.77
PRKCSH-217ENST00000592741 FOXD4L3Q6VB84 417 aaPredicted RBP19.83■□□□□ 0.77
PRKCSH-217ENST00000592741 EDC3Q96F86 508 aaKnown RBP19.83■□□□□ 0.77
PRKCSH-217ENST00000592741 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
PRKCSH-217ENST00000592741 PRIM1P49642 420 aaKnown RBP19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 ZNF589Q86UQ0 364 aaPredicted RBP19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 TMEM87AQ8NBN3 555 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 CCDC191Q8NCU4 936 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 PPP1R9BQ96SB3 815 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 HAUS7Q99871 368 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 ATP6V1DQ9Y5K8 247 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 ZNF335Q9H4Z2 1342 aaPredicted RBP19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 GJB2P29033 226 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 ANKRD1Q15327 319 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 BLOC1S2Q6QNY1 142 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 USP48Q86UV5 1035 aa19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 DNAJC2Q99543 621 aaKnown RBP19.82■□□□□ 0.76
PRKCSH-217ENST00000592741 SYCE3A1L190 88 aa19.81■□□□□ 0.76
PRKCSH-217ENST00000592741 F13A1P00488 732 aa19.81■□□□□ 0.76
PRKCSH-217ENST00000592741 RBSNQ9H1K0 784 aa19.81■□□□□ 0.76
PRKCSH-217ENST00000592741 ZBTB3Q9H5J0 574 aa19.81■□□□□ 0.76
PRKCSH-217ENST00000592741 TAF5LO75529 589 aa19.81■□□□□ 0.76
PRKCSH-217ENST00000592741 ME3Q16798 604 aa19.81■□□□□ 0.76
PRKCSH-217ENST00000592741 GPR108Q9NPR9 543 aa19.81■□□□□ 0.76
PRKCSH-217ENST00000592741 TSGA10IPQ3SY00 556 aa19.8■□□□□ 0.76
PRKCSH-217ENST00000592741 ALDH8A1Q9H2A2 487 aaPredicted RBP19.8■□□□□ 0.76
PRKCSH-217ENST00000592741 GDPD2Q9HCC8 539 aa19.8■□□□□ 0.76
PRKCSH-217ENST00000592741 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
PRKCSH-217ENST00000592741 RPS6KB1P23443 525 aa19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 IL15P40933 162 aaPredicted RBP19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 TMOD3Q9NYL9 352 aa19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 NHSL1Q5SYE7 1610 aa19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 KRT32Q14532 448 aa19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 USPL1Q5W0Q7 1092 aa19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 ATG9AQ7Z3C6 839 aa19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 TPCN1Q9ULQ1 816 aa19.79■□□□□ 0.76
PRKCSH-217ENST00000592741 ZNF609O15014 1411 aa19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 ESPNB1AK53 854 aa19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 PHF14O94880 888 aa19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 CLCN1P35523 988 aa19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 ST3GAL1Q11201 340 aa19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 GADD45BO75293 160 aaPredicted RBP19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 CNPY2Q9Y2B0 182 aa19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 NDUFB9Q9Y6M9 179 aa19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 U3KPZ7 1027 aaPredicted RBP19.78■□□□□ 0.76
PRKCSH-217ENST00000592741 PDIA4P13667 645 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-217ENST00000592741 MCMDC2Q4G0Z9 681 aa19.77■□□□□ 0.76
PRKCSH-217ENST00000592741 NECAB1Q8N987 351 aa19.77■□□□□ 0.76
PRKCSH-217ENST00000592741 KBTBD3Q8NAB2 608 aa19.77■□□□□ 0.76
PRKCSH-217ENST00000592741 NEUROD6Q96NK8 337 aa19.77■□□□□ 0.76
PRKCSH-217ENST00000592741 ATG3Q9NT62 314 aa19.77■□□□□ 0.76
PRKCSH-217ENST00000592741 EYA2O00167 538 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 CSPP1Q1MSJ5 1256 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 DDX46Q7L014 1031 aaKnown RBP19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 MTMR6Q9Y217 621 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 PALLDQ8WX93 1383 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 TCHHQ07283 1943 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 CIAO1O76071 339 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 ISCA1Q9BUE6 129 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 SH3TC1Q8TE82 1336 aa19.76■□□□□ 0.75
PRKCSH-217ENST00000592741 TICAM2Q86XR7 235 aa19.75■□□□□ 0.75
PRKCSH-217ENST00000592741 TEX13AQ9BXU3 409 aaPredicted RBP19.75■□□□□ 0.75
PRKCSH-217ENST00000592741 TAF6LQ9Y6J9 622 aa19.75■□□□□ 0.75
PRKCSH-217ENST00000592741 CCDC9Q9Y3X0 531 aaKnown RBP19.75■□□□□ 0.75
PRKCSH-217ENST00000592741 UBE2HP62256 183 aa19.74■□□□□ 0.75
PRKCSH-217ENST00000592741 TCIRG1Q13488 830 aa19.74■□□□□ 0.75
PRKCSH-217ENST00000592741 TSPY26PQ9H489 355 aa19.74■□□□□ 0.75
PRKCSH-217ENST00000592741 PAG1Q9NWQ8 432 aa19.74■□□□□ 0.75
PRKCSH-217ENST00000592741 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 TOB2Q14106 344 aaPredicted RBP19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 KIF6Q6ZMV9 814 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 CCDC129Q6ZRS4 1044 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 TCEANC2Q96MN5 208 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 NEK1Q96PY6 1258 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 GOLIM4O00461 696 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 PDCP20941 246 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 LRRC24Q50LG9 513 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 ZNF594Q96JF6 807 aaPredicted RBP19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 SEC62Q99442 399 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 HELLSQ9NRZ9 838 aa19.73■□□□□ 0.75
PRKCSH-217ENST00000592741 FIBPO43427 364 aa19.72■□□□□ 0.75
PRKCSH-217ENST00000592741 TIMM10P62072 90 aa19.72■□□□□ 0.75
PRKCSH-217ENST00000592741 COL9A3Q14050 684 aaPredicted RBP19.72■□□□□ 0.75
PRKCSH-217ENST00000592741 LARP1BQ659C4 914 aaKnown RBP19.72■□□□□ 0.75
PRKCSH-217ENST00000592741 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
PRKCSH-217ENST00000592741 CCDC183Q5T5S1 534 aa19.72■□□□□ 0.75
PRKCSH-217ENST00000592741 SPEF2Q9C093 1822 aa19.71■□□□□ 0.75
PRKCSH-217ENST00000592741 TRIM28Q13263 835 aaKnown RBP19.71■□□□□ 0.75
PRKCSH-217ENST00000592741 CCDC57Q2TAC2 916 aa19.71■□□□□ 0.75
PRKCSH-217ENST00000592741 DNAJC10Q8IXB1 793 aa19.71■□□□□ 0.75
PRKCSH-217ENST00000592741 A0A1B0GUL7 405 aa19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 STARD3NLO95772 234 aa19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 CHGBP05060 677 aa19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 IFIT1P09914 478 aaKnown RBP19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 PIGBQ92521 554 aa19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 CEP126Q9P2H0 1117 aa19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 FBXO3Q9UK99 471 aa19.7■□□□□ 0.74
PRKCSH-217ENST00000592741 LETM1O95202 739 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms