RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 DIP2AQ14689 1571 aa21.19■□□□□ 0.98
SPC24-206ENST00000592540 FSD1Q9BTV5 496 aa21.19■□□□□ 0.98
SPC24-206ENST00000592540 MYH15Q9Y2K3 1946 aa21.19■□□□□ 0.98
SPC24-206ENST00000592540 JAK2O60674 1132 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 RBM6P78332 1123 aaKnown RBP21.18■□□□□ 0.98
SPC24-206ENST00000592540 GABPB1Q06547 395 aaPredicted RBP21.18■□□□□ 0.98
SPC24-206ENST00000592540 TSGA10IPQ3SY00 556 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 ZNF592Q92610 1267 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 SLC26A8Q96RN1 970 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 HMG20BQ9P0W2 317 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 MORC2Q9Y6X9 1032 aaPredicted RBP21.18■□□□□ 0.98
SPC24-206ENST00000592540 JCADQ9P266 1359 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 GOLGA6L19H0YKK7 550 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 MRFAP1L1Q96HT8 127 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 HDAC5Q9UQL6 1122 aa21.18■□□□□ 0.98
SPC24-206ENST00000592540 NEMFO60524 1076 aa21.17■□□□□ 0.98
SPC24-206ENST00000592540 BRF1Q92994 677 aa21.17■□□□□ 0.98
SPC24-206ENST00000592540 GTF3C6Q969F1 213 aa21.17■□□□□ 0.98
SPC24-206ENST00000592540 BOLA2Q9H3K6 86 aa21.17■□□□□ 0.98
SPC24-206ENST00000592540 DBF4Q9UBU7 674 aaPredicted RBP21.17■□□□□ 0.98
SPC24-206ENST00000592540 USP27XA6NNY8 438 aa21.17■□□□□ 0.98
SPC24-206ENST00000592540 G3BP1Q13283 466 aaKnown RBP eCLIP21.17■□□□□ 0.98
SPC24-206ENST00000592540 ZNF771Q7L3S4 317 aaPredicted RBP21.17■□□□□ 0.98
SPC24-206ENST00000592540 ZNF589Q86UQ0 364 aaPredicted RBP21.17■□□□□ 0.98
SPC24-206ENST00000592540 KIF18AQ8NI77 898 aa21.17■□□□□ 0.98
SPC24-206ENST00000592540 TLR7Q9NYK1 1049 aaKnown RBP21.17■□□□□ 0.98
SPC24-206ENST00000592540 USP54Q70EL1 1684 aa21.16■□□□□ 0.98
SPC24-206ENST00000592540 ARID5BQ14865 1188 aa21.16■□□□□ 0.98
SPC24-206ENST00000592540 CWF19L2Q2TBE0 894 aaKnown RBP21.16■□□□□ 0.98
SPC24-206ENST00000592540 C11orf57Q6ZUT1 292 aaPredicted RBP21.16■□□□□ 0.98
SPC24-206ENST00000592540 NYAP1Q6ZVC0 841 aa21.16■□□□□ 0.98
SPC24-206ENST00000592540 DDX11Q96FC9 970 aa21.16■□□□□ 0.98
SPC24-206ENST00000592540 CFAP45Q9UL16 551 aa21.16■□□□□ 0.98
SPC24-206ENST00000592540 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
SPC24-206ENST00000592540 SETD1BQ9UPS6 1966 aaKnown RBP21.16■□□□□ 0.98
SPC24-206ENST00000592540 KSR2Q6VAB6 950 aa21.15■□□□□ 0.98
SPC24-206ENST00000592540 ZSCAN16Q9H4T2 348 aaPredicted RBP21.15■□□□□ 0.98
SPC24-206ENST00000592540 BTBD11A6QL63 1104 aa21.15■□□□□ 0.98
SPC24-206ENST00000592540 H3BQV1 296 aa21.15■□□□□ 0.98
SPC24-206ENST00000592540 IFFO2Q5TF58 517 aa21.15■□□□□ 0.98
SPC24-206ENST00000592540 PODXL2Q9NZ53 605 aa21.15■□□□□ 0.98
SPC24-206ENST00000592540 LTN1O94822 1766 aa21.15■□□□□ 0.98
SPC24-206ENST00000592540 TAF5LO75529 589 aa21.14■□□□□ 0.97
SPC24-206ENST00000592540 PTPN14Q15678 1187 aa21.14■□□□□ 0.97
SPC24-206ENST00000592540 STX1AQ16623 288 aa21.14■□□□□ 0.97
SPC24-206ENST00000592540 KAZALD1Q96I82 304 aa21.14■□□□□ 0.97
SPC24-206ENST00000592540 SKILP12757 684 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 TEFQ10587 303 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 ZNF397Q8NF99 534 aaPredicted RBP21.13■□□□□ 0.97
SPC24-206ENST00000592540 SUCLG2Q96I99 432 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 ZNF215Q9UL58 517 aaPredicted RBP21.13■□□□□ 0.97
SPC24-206ENST00000592540 CTAGE5O15320 804 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 KRT32Q14532 448 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 BICC1Q9H694 974 aaKnown RBP21.13■□□□□ 0.97
SPC24-206ENST00000592540 LMO7Q8WWI1 1683 aa21.13■□□□□ 0.97
SPC24-206ENST00000592540 SLFN14P0C7P3 912 aa21.12■□□□□ 0.97
SPC24-206ENST00000592540 ABTB2Q8N961 1025 aa21.12■□□□□ 0.97
SPC24-206ENST00000592540 BCL11BQ9C0K0 894 aaPredicted RBP21.12■□□□□ 0.97
SPC24-206ENST00000592540 GRM8O00222 908 aa21.12■□□□□ 0.97
SPC24-206ENST00000592540 CEBPZQ03701 1054 aaKnown RBP21.12■□□□□ 0.97
SPC24-206ENST00000592540 KMT5BQ4FZB7 885 aa21.12■□□□□ 0.97
SPC24-206ENST00000592540 NEK1Q96PY6 1258 aa21.12■□□□□ 0.97
SPC24-206ENST00000592540 SLIT1O75093 1534 aa21.11■□□□□ 0.97
SPC24-206ENST00000592540 CCZ1BP86790 482 aa21.11■□□□□ 0.97
SPC24-206ENST00000592540 CCZ1P86791 482 aaPredicted RBP21.11■□□□□ 0.97
SPC24-206ENST00000592540 CCAR1Q8IX12 1150 aaKnown RBP21.11■□□□□ 0.97
SPC24-206ENST00000592540 USP16Q9Y5T5 823 aa21.11■□□□□ 0.97
SPC24-206ENST00000592540 CCDC69A6NI79 296 aa21.11■□□□□ 0.97
SPC24-206ENST00000592540 ADD1P35611 737 aaKnown RBP21.11■□□□□ 0.97
SPC24-206ENST00000592540 TAF3Q5VWG9 929 aa21.11■□□□□ 0.97
SPC24-206ENST00000592540 Q6ZUG5 572 aa21.11■□□□□ 0.97
SPC24-206ENST00000592540 SIL1Q9H173 461 aa21.11■□□□□ 0.97
SPC24-206ENST00000592540 UTYO14607 1347 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 BECN2A8MW95 431 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 HSP90B1P14625 803 aaKnown RBP21.1■□□□□ 0.97
SPC24-206ENST00000592540 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 FILIP1Q7Z7B0 1213 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 DHX40Q8IX18 779 aaKnown RBP21.1■□□□□ 0.97
SPC24-206ENST00000592540 KRT222Q8N1A0 295 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 LINS1Q8NG48 757 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 GOLPH3LQ9H4A5 285 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 RCOR1Q9UKL0 485 aa21.1■□□□□ 0.97
SPC24-206ENST00000592540 COL15A1P39059 1388 aa21.09■□□□□ 0.97
SPC24-206ENST00000592540 CCAR2Q8N163 923 aaKnown RBP21.09■□□□□ 0.97
SPC24-206ENST00000592540 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.09■□□□□ 0.97
SPC24-206ENST00000592540 V9GYY5 206 aaPredicted RBP21.09■□□□□ 0.97
SPC24-206ENST00000592540 RGPD2P0DJD1 1756 aa21.09■□□□□ 0.97
SPC24-206ENST00000592540 SNW1Q13573 536 aaKnown RBP21.09■□□□□ 0.97
SPC24-206ENST00000592540 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
SPC24-206ENST00000592540 SMARCC2Q8TAQ2 1214 aa21.09■□□□□ 0.97
SPC24-206ENST00000592540 EDC3Q96F86 508 aaKnown RBP21.09■□□□□ 0.97
SPC24-206ENST00000592540 ERO1AQ96HE7 468 aa21.09■□□□□ 0.97
SPC24-206ENST00000592540 KCND1Q9NSA2 647 aa21.09■□□□□ 0.97
SPC24-206ENST00000592540 TRMT1Q9NXH9 659 aaKnown RBP21.09■□□□□ 0.97
SPC24-206ENST00000592540 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
SPC24-206ENST00000592540 LAMA4Q16363 1823 aa21.08■□□□□ 0.96
SPC24-206ENST00000592540 SCRN1Q12765 414 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms