RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 CNOT7Q9UIV1 285 aaKnown RBP12.06□□□□□ -0.48
APOC1-207ENST00000592176 ABCC4O15439 1325 aa12.06□□□□□ -0.48
APOC1-207ENST00000592176 H7C1D1 291 aa12.05□□□□□ -0.48
APOC1-207ENST00000592176 SLC34A2O95436 690 aa12.05□□□□□ -0.48
APOC1-207ENST00000592176 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
APOC1-207ENST00000592176 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
APOC1-207ENST00000592176 KIAA2012Q0VF49 1180 aa12.05□□□□□ -0.48
APOC1-207ENST00000592176 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
APOC1-207ENST00000592176 CFAP44Q96MT7 982 aa12.05□□□□□ -0.48
APOC1-207ENST00000592176 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
APOC1-207ENST00000592176 LTBP1Q14766 1721 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 ANXA1P04083 346 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 AIMP1Q12904 312 aaKnown RBP12.04□□□□□ -0.48
APOC1-207ENST00000592176 GRAPQ13588 217 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 COPS6Q7L5N1 327 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 USP48Q86UV5 1035 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 NLRP10Q86W26 655 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
APOC1-207ENST00000592176 MCOLN1Q9GZU1 580 aa12.04□□□□□ -0.48
APOC1-207ENST00000592176 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
APOC1-207ENST00000592176 RIPK4P57078 832 aa12.03□□□□□ -0.48
APOC1-207ENST00000592176 TCIRG1Q13488 830 aa12.03□□□□□ -0.48
APOC1-207ENST00000592176 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
APOC1-207ENST00000592176 TRPM4Q8TD43 1214 aa12.03□□□□□ -0.48
APOC1-207ENST00000592176 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
APOC1-207ENST00000592176 CDHR2Q9BYE9 1310 aa12.03□□□□□ -0.48
APOC1-207ENST00000592176 YDJCA8MPS7 323 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 HUNKP57058 714 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 NOGQ13253 232 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 DGKZQ13574 1117 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 WASHC4Q2M389 1173 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 TMC4Q7Z404 712 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 XAGE3Q8WTP9 111 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 NECTIN2Q92692 538 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.49
APOC1-207ENST00000592176 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
APOC1-207ENST00000592176 SHTN1A0MZ66 631 aa12.01□□□□□ -0.49
APOC1-207ENST00000592176 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
APOC1-207ENST00000592176 DPF2Q92785 391 aa12.01□□□□□ -0.49
APOC1-207ENST00000592176 NUP98P52948 1817 aa12.01□□□□□ -0.49
APOC1-207ENST00000592176 C6orf229H3BNL8 230 aa12□□□□□ -0.49
APOC1-207ENST00000592176 RIMBP2O15034 1052 aa12□□□□□ -0.49
APOC1-207ENST00000592176 TBC1D10BQ4KMP7 808 aaPredicted RBP12□□□□□ -0.49
APOC1-207ENST00000592176 DLK2Q6UY11 383 aa12□□□□□ -0.49
APOC1-207ENST00000592176 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
APOC1-207ENST00000592176 C2orf69Q8N8R5 385 aa12□□□□□ -0.49
APOC1-207ENST00000592176 ZIC5Q96T25 663 aa12□□□□□ -0.49
APOC1-207ENST00000592176 NSFL1CQ9UNZ2 370 aaKnown RBP12□□□□□ -0.49
APOC1-207ENST00000592176 PSMD14O00487 310 aa11.99□□□□□ -0.49
APOC1-207ENST00000592176 RBM26Q5T8P6 1007 aaKnown RBP11.99□□□□□ -0.49
APOC1-207ENST00000592176 RGMBQ6NW40 437 aa11.99□□□□□ -0.49
APOC1-207ENST00000592176 KRT26Q7Z3Y9 468 aa11.99□□□□□ -0.49
APOC1-207ENST00000592176 CCDC102AQ96A19 550 aa11.99□□□□□ -0.49
APOC1-207ENST00000592176 ZNF428Q96B54 188 aa11.99□□□□□ -0.49
APOC1-207ENST00000592176 DCPSQ96C86 337 aaKnown RBP11.99□□□□□ -0.49
APOC1-207ENST00000592176 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
APOC1-207ENST00000592176 KIF23Q02241 960 aaPredicted RBP11.98□□□□□ -0.49
APOC1-207ENST00000592176 LMOD3Q0VAK6 560 aa11.98□□□□□ -0.49
APOC1-207ENST00000592176 FAM89AQ96GI7 184 aa11.98□□□□□ -0.49
APOC1-207ENST00000592176 EYA3Q99504 573 aa11.98□□□□□ -0.49
APOC1-207ENST00000592176 DBNDD1Q9H9R9 158 aa11.98□□□□□ -0.49
APOC1-207ENST00000592176 GBA2Q9HCG7 927 aaPredicted RBP11.98□□□□□ -0.49
APOC1-207ENST00000592176 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 FAM155AB1AL88 458 aaPredicted RBP11.97□□□□□ -0.49
APOC1-207ENST00000592176 RPS12P25398 132 aaKnown RBP11.97□□□□□ -0.49
APOC1-207ENST00000592176 ZNF157P51786 506 aaPredicted RBP11.97□□□□□ -0.49
APOC1-207ENST00000592176 GPSM2P81274 684 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 SF3B3Q15393 1217 aaKnown RBP11.97□□□□□ -0.49
APOC1-207ENST00000592176 DOK7Q18PE1 504 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
APOC1-207ENST00000592176 KCNQ5Q9NR82 932 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 POLLQ9UGP5 575 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
APOC1-207ENST00000592176 KDM3BQ7LBC6 1761 aa11.97□□□□□ -0.49
APOC1-207ENST00000592176 TRPM7Q96QT4 1865 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 ATP5J2-PTCD1G3V325 749 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 G3V3G9 751 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 CHL1O00533 1208 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 ECE2O60344 883 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 EGFRP00533 1210 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.49
APOC1-207ENST00000592176 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 ZC3H12CQ9C0D7 883 aaKnown RBP11.96□□□□□ -0.49
APOC1-207ENST00000592176 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.49
APOC1-207ENST00000592176 THSD7BQ9C0I4 1608 aa11.96□□□□□ -0.5
APOC1-207ENST00000592176 ADM5C9JUS6 153 aa11.95□□□□□ -0.5
APOC1-207ENST00000592176 TRPA1O75762 1119 aa11.95□□□□□ -0.5
APOC1-207ENST00000592176 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
APOC1-207ENST00000592176 KRT24Q2M2I5 525 aa11.95□□□□□ -0.5
APOC1-207ENST00000592176 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
APOC1-207ENST00000592176 TBC1D16Q8TBP0 767 aa11.95□□□□□ -0.5
APOC1-207ENST00000592176 ISCA1Q9BUE6 129 aa11.95□□□□□ -0.5
APOC1-207ENST00000592176 RNF186Q9NXI6 227 aa11.95□□□□□ -0.5
APOC1-207ENST00000592176 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
APOC1-207ENST00000592176 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
APOC1-207ENST00000592176 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms