RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 GPRC5DQ9NZD1 345 aa29.82■■■□□ 2.36
LSM7-206ENST00000591515 ERBB4Q15303 1308 aa29.81■■■□□ 2.36
LSM7-206ENST00000591515 MAP3K15Q6ZN16 1313 aa29.81■■■□□ 2.36
LSM7-206ENST00000591515 ERVV-1B6SEH8 477 aa29.81■■■□□ 2.36
LSM7-206ENST00000591515 TCERG1O14776 1098 aaKnown RBP29.81■■■□□ 2.36
LSM7-206ENST00000591515 PPEF1O14829 653 aaPredicted RBP29.81■■■□□ 2.36
LSM7-206ENST00000591515 CRAMP1Q96RY5 1269 aa29.81■■■□□ 2.36
LSM7-206ENST00000591515 TNRC18O15417 2968 aaPredicted RBP29.8■■■□□ 2.36
LSM7-206ENST00000591515 PPIP5K2O43314 1243 aa29.8■■■□□ 2.36
LSM7-206ENST00000591515 GOLGA2Q08379 1002 aa29.8■■■□□ 2.36
LSM7-206ENST00000591515 LAMB2P55268 1798 aa29.8■■■□□ 2.36
LSM7-206ENST00000591515 ZNF521Q96K83 1311 aa29.79■■■□□ 2.36
LSM7-206ENST00000591515 CA12O43570 354 aa29.79■■■□□ 2.36
LSM7-206ENST00000591515 CELF2O95319 508 aaKnown RBP29.79■■■□□ 2.36
LSM7-206ENST00000591515 GPTP24298 496 aa29.79■■■□□ 2.36
LSM7-206ENST00000591515 AOC3Q16853 763 aa29.79■■■□□ 2.36
LSM7-206ENST00000591515 TTLL7Q6ZT98 887 aa29.79■■■□□ 2.36
LSM7-206ENST00000591515 C3orf67Q6ZVT6 689 aa29.79■■■□□ 2.36
LSM7-206ENST00000591515 RBM17Q96I25 401 aaKnown RBP29.79■■■□□ 2.36
LSM7-206ENST00000591515 PCDH10Q9P2E7 1040 aa29.79■■■□□ 2.36
LSM7-206ENST00000591515 SUSD4Q5VX71 490 aa29.78■■■□□ 2.36
LSM7-206ENST00000591515 GLIS2Q9BZE0 524 aaPredicted RBP29.78■■■□□ 2.36
LSM7-206ENST00000591515 BRPF1P55201 1214 aaPredicted RBP29.77■■■□□ 2.36
LSM7-206ENST00000591515 E9PSI1 815 aa29.76■■■□□ 2.35
LSM7-206ENST00000591515 HNRNPUQ00839 825 aaKnown RBP eCLIP29.76■■■□□ 2.35
LSM7-206ENST00000591515 DUSP27Q5VZP5 1158 aa29.76■■■□□ 2.35
LSM7-206ENST00000591515 HHIPL1Q96JK4 782 aa29.76■■■□□ 2.35
LSM7-206ENST00000591515 NTSR2O95665 410 aa29.75■■■□□ 2.35
LSM7-206ENST00000591515 EIF2S2P20042 333 aaKnown RBP29.75■■■□□ 2.35
LSM7-206ENST00000591515 CXCL9Q07325 125 aa29.75■■■□□ 2.35
LSM7-206ENST00000591515 KIF6Q6ZMV9 814 aa29.75■■■□□ 2.35
LSM7-206ENST00000591515 TSR2Q969E8 191 aaKnown RBP29.75■■■□□ 2.35
LSM7-206ENST00000591515 FANCIQ9NVI1 1328 aa29.74■■■□□ 2.35
LSM7-206ENST00000591515 GMPSP49915 693 aaPredicted RBP29.74■■■□□ 2.35
LSM7-206ENST00000591515 HDGFL1Q5TGJ6 251 aa29.74■■■□□ 2.35
LSM7-206ENST00000591515 ZBTB3Q9H5J0 574 aa29.74■■■□□ 2.35
LSM7-206ENST00000591515 CIAPIN1Q6FI81 312 aa29.73■■■□□ 2.35
LSM7-206ENST00000591515 ZNF34Q8IZ26 560 aa29.73■■■□□ 2.35
LSM7-206ENST00000591515 PGAP2Q9UHJ9 254 aa29.73■■■□□ 2.35
LSM7-206ENST00000591515 ANKRD36CQ5JPF3 1778 aa29.72■■■□□ 2.35
LSM7-206ENST00000591515 POLR2AP24928 1970 aaKnown RBP29.72■■■□□ 2.35
LSM7-206ENST00000591515 DGKZQ13574 1117 aa29.72■■■□□ 2.35
LSM7-206ENST00000591515 ZNRF3Q9ULT6 936 aa29.72■■■□□ 2.35
LSM7-206ENST00000591515 ATP6V0A2Q9Y487 856 aa29.72■■■□□ 2.35
LSM7-206ENST00000591515 KRT24Q2M2I5 525 aa29.71■■■□□ 2.35
LSM7-206ENST00000591515 VPS33BQ9H267 617 aa29.71■■■□□ 2.35
LSM7-206ENST00000591515 ZNF408Q9H9D4 720 aa29.71■■■□□ 2.35
LSM7-206ENST00000591515 TAF1P21675 1872 aa29.7■■■□□ 2.35
LSM7-206ENST00000591515 MYL6BP14649 208 aa29.7■■■□□ 2.35
LSM7-206ENST00000591515 HIRAP54198 1017 aaPredicted RBP29.69■■■□□ 2.34
LSM7-206ENST00000591515 ZIC5Q96T25 663 aa29.69■■■□□ 2.34
LSM7-206ENST00000591515 RTFDC1Q9BY42 306 aaPredicted RBP29.69■■■□□ 2.34
LSM7-206ENST00000591515 ABCC4O15439 1325 aa29.69■■■□□ 2.34
LSM7-206ENST00000591515 CDHR2Q9BYE9 1310 aa29.69■■■□□ 2.34
LSM7-206ENST00000591515 ELL2O00472 640 aaPredicted RBP29.68■■■□□ 2.34
LSM7-206ENST00000591515 TWISTNBQ3B726 338 aaPredicted RBP29.68■■■□□ 2.34
LSM7-206ENST00000591515 CCDC30Q5VVM6 783 aa29.68■■■□□ 2.34
LSM7-206ENST00000591515 C8orf58Q8NAV2 365 aa29.68■■■□□ 2.34
LSM7-206ENST00000591515 TRPM4Q8TD43 1214 aa29.68■■■□□ 2.34
LSM7-206ENST00000591515 DBF4Q9UBU7 674 aaPredicted RBP29.68■■■□□ 2.34
LSM7-206ENST00000591515 GIGYF2Q6Y7W6 1299 aaKnown RBP29.67■■■□□ 2.34
LSM7-206ENST00000591515 ZC3H15Q8WU90 426 aaKnown RBP29.67■■■□□ 2.34
LSM7-206ENST00000591515 SUPT20HQ8NEM7 779 aa29.66■■■□□ 2.34
LSM7-206ENST00000591515 NLRP3Q96P20 1036 aa29.66■■■□□ 2.34
LSM7-206ENST00000591515 AKAP11Q9UKA4 1901 aa29.66■■■□□ 2.34
LSM7-206ENST00000591515 SLFN5Q08AF3 891 aa29.65■■■□□ 2.34
LSM7-206ENST00000591515 PPP1R42Q7Z4L9 355 aa29.65■■■□□ 2.34
LSM7-206ENST00000591515 NECTIN2Q92692 538 aa29.65■■■□□ 2.34
LSM7-206ENST00000591515 TMX4Q9H1E5 349 aaPredicted RBP29.65■■■□□ 2.34
LSM7-206ENST00000591515 SPINK5Q9NQ38 1064 aaPredicted RBP29.65■■■□□ 2.34
LSM7-206ENST00000591515 DUOX1Q9NRD9 1551 aa29.64■■■□□ 2.34
LSM7-206ENST00000591515 SHTN1A0MZ66 631 aa29.64■■■□□ 2.34
LSM7-206ENST00000591515 EXOSC9Q06265 439 aaKnown RBP29.64■■■□□ 2.34
LSM7-206ENST00000591515 NOGQ13253 232 aa29.64■■■□□ 2.34
LSM7-206ENST00000591515 CDC37L1Q7L3B6 337 aa29.64■■■□□ 2.34
LSM7-206ENST00000591515 BCL2L13Q9BXK5 485 aa29.64■■■□□ 2.34
LSM7-206ENST00000591515 STK31Q9BXU1 1019 aa29.64■■■□□ 2.34
LSM7-206ENST00000591515 RAD17O75943 681 aa29.63■■■□□ 2.33
LSM7-206ENST00000591515 KIAA2012Q0VF49 1180 aa29.63■■■□□ 2.33
LSM7-206ENST00000591515 HYPKQ9NX55 129 aa29.63■■■□□ 2.33
LSM7-206ENST00000591515 LRRC37AA6NMS7 1700 aa29.62■■■□□ 2.33
LSM7-206ENST00000591515 PARP10Q53GL7 1025 aa29.62■■■□□ 2.33
LSM7-206ENST00000591515 DPP8Q6V1X1 898 aaPredicted RBP29.62■■■□□ 2.33
LSM7-206ENST00000591515 ZBED9Q6R2W3 1325 aa29.62■■■□□ 2.33
LSM7-206ENST00000591515 HUNKP57058 714 aa29.61■■■□□ 2.33
LSM7-206ENST00000591515 SLC10A5Q5PT55 438 aa29.61■■■□□ 2.33
LSM7-206ENST00000591515 DLK2Q6UY11 383 aa29.61■■■□□ 2.33
LSM7-206ENST00000591515 CHPF2Q9P2E5 772 aa29.61■■■□□ 2.33
LSM7-206ENST00000591515 TSPYL6Q8N831 410 aa29.6■■■□□ 2.33
LSM7-206ENST00000591515 CNOT7Q9UIV1 285 aaKnown RBP29.6■■■□□ 2.33
LSM7-206ENST00000591515 YDJCA8MPS7 323 aa29.59■■■□□ 2.33
LSM7-206ENST00000591515 TNIP1Q15025 636 aa29.59■■■□□ 2.33
LSM7-206ENST00000591515 PDIA6Q15084 440 aa29.59■■■□□ 2.33
LSM7-206ENST00000591515 USP48Q86UV5 1035 aa29.59■■■□□ 2.33
LSM7-206ENST00000591515 SP8Q8IXZ3 490 aa29.59■■■□□ 2.33
LSM7-206ENST00000591515 MPNDQ8N594 471 aa29.59■■■□□ 2.33
LSM7-206ENST00000591515 UTP14AQ9BVJ6 771 aaKnown RBP29.59■■■□□ 2.33
LSM7-206ENST00000591515 LRP10Q7Z4F1 713 aa29.58■■■□□ 2.33
LSM7-206ENST00000591515 BBOX1O75936 387 aa29.57■■■□□ 2.32
LSM7-206ENST00000591515 FAM155AB1AL88 458 aaPredicted RBP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms