RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 NMIQ13287 307 aaPredicted RBP13.67□□□□□ -0.22
TPM4-213ENST00000591226 LRRC24Q50LG9 513 aa13.67□□□□□ -0.22
TPM4-213ENST00000591226 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
TPM4-213ENST00000591226 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
TPM4-213ENST00000591226 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
TPM4-213ENST00000591226 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
TPM4-213ENST00000591226 EYA2O00167 538 aa13.66□□□□□ -0.22
TPM4-213ENST00000591226 HIP1O00291 1037 aa13.66□□□□□ -0.22
TPM4-213ENST00000591226 IL15P40933 162 aaPredicted RBP13.66□□□□□ -0.22
TPM4-213ENST00000591226 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
TPM4-213ENST00000591226 SYNE4Q8N205 404 aa13.66□□□□□ -0.22
TPM4-213ENST00000591226 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
TPM4-213ENST00000591226 NDUFB9Q9Y6M9 179 aa13.66□□□□□ -0.22
TPM4-213ENST00000591226 A0A0D9SFI3 127 aa13.65□□□□□ -0.22
TPM4-213ENST00000591226 SSFA2P28290 1259 aa13.65□□□□□ -0.22
TPM4-213ENST00000591226 NOL8Q76FK4 1167 aaKnown RBP13.65□□□□□ -0.22
TPM4-213ENST00000591226 NLRP10Q86W26 655 aa13.65□□□□□ -0.22
TPM4-213ENST00000591226 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
TPM4-213ENST00000591226 CCDC85AQ96PX6 553 aaPredicted RBP13.65□□□□□ -0.22
TPM4-213ENST00000591226 PUS3Q9BZE2 481 aaKnown RBP13.65□□□□□ -0.22
TPM4-213ENST00000591226 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
TPM4-213ENST00000591226 MCM2P49736 904 aa13.65□□□□□ -0.22
TPM4-213ENST00000591226 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
TPM4-213ENST00000591226 NUP98P52948 1817 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 DZIP3Q86Y13 1208 aaKnown RBP13.64□□□□□ -0.23
TPM4-213ENST00000591226 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 ZNF609O15014 1411 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 CIAO1O76071 339 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 NEUROD6Q96NK8 337 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
TPM4-213ENST00000591226 GPR108Q9NPR9 543 aa13.64□□□□□ -0.23
TPM4-213ENST00000591226 TIMM10P62072 90 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 C8orf37Q96NL8 207 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 ATP6V1AP38606 617 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 SIK1P57059 783 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
TPM4-213ENST00000591226 PRPF40BQ6NWY9 871 aaKnown RBP13.63□□□□□ -0.23
TPM4-213ENST00000591226 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
TPM4-213ENST00000591226 HAUS7Q99871 368 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
TPM4-213ENST00000591226 CSF1RP07333 972 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 CWC22Q9HCG8 908 aaKnown RBP13.62□□□□□ -0.23
TPM4-213ENST00000591226 MED23Q9ULK4 1368 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
TPM4-213ENST00000591226 ITPK1Q13572 414 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 PKP1Q13835 747 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
TPM4-213ENST00000591226 KCNQ2O43526 872 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 EIF5P55010 431 aaKnown RBP13.61□□□□□ -0.23
TPM4-213ENST00000591226 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 DDX46Q7L014 1031 aaKnown RBP13.61□□□□□ -0.23
TPM4-213ENST00000591226 ZNF589Q86UQ0 364 aaPredicted RBP13.61□□□□□ -0.23
TPM4-213ENST00000591226 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 PALLDQ8WX93 1383 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 RBM8AQ9Y5S9 174 aaKnown RBP13.61□□□□□ -0.23
TPM4-213ENST00000591226 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 CUL4AQ13619 759 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 TAF7LQ5H9L4 462 aa13.61□□□□□ -0.23
TPM4-213ENST00000591226 TRMT112Q9UI30 125 aaKnown RBP13.61□□□□□ -0.23
TPM4-213ENST00000591226 JCADQ9P266 1359 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
TPM4-213ENST00000591226 CHGBP05060 677 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 CYP2E1P05181 493 aaPredicted RBP13.6□□□□□ -0.23
TPM4-213ENST00000591226 NUCB2P80303 420 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 IFIT5Q13325 482 aaKnown RBP13.6□□□□□ -0.23
TPM4-213ENST00000591226 NECTIN1Q15223 517 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 MAP4K1Q92918 833 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 TTC14Q96N46 770 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 RFX7Q2KHR2 1363 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 CPA1P15085 419 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 CASTP20810 708 aaKnown RBP13.6□□□□□ -0.23
TPM4-213ENST00000591226 KCNJ4P48050 445 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 CTSWP56202 376 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 TTLL11Q8NHH1 800 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 KCNB2Q92953 911 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 GREM2Q9H772 168 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 RREB1Q92766 1687 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
TPM4-213ENST00000591226 MYH3P11055 1940 aa13.6□□□□□ -0.23
TPM4-213ENST00000591226 VPS72Q15906 364 aa13.59□□□□□ -0.23
TPM4-213ENST00000591226 ADCK5Q3MIX3 580 aa13.59□□□□□ -0.23
TPM4-213ENST00000591226 CREB3L3Q68CJ9 461 aa13.59□□□□□ -0.23
TPM4-213ENST00000591226 ZNF34Q8IZ26 560 aa13.59□□□□□ -0.23
TPM4-213ENST00000591226 CICQ96RK0 1608 aaPredicted RBP13.59□□□□□ -0.23
TPM4-213ENST00000591226 TRAK2O60296 914 aa13.59□□□□□ -0.23
TPM4-213ENST00000591226 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
TPM4-213ENST00000591226 GOLIM4O00461 696 aa13.58□□□□□ -0.23
TPM4-213ENST00000591226 ITGA6P23229 1130 aa13.58□□□□□ -0.23
TPM4-213ENST00000591226 AK2P54819 239 aa13.58□□□□□ -0.23
TPM4-213ENST00000591226 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms