RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ERBB4Q15303 1308 aa22.92■■□□□ 1.26
RETREG3-210ENST00000590541 RAD17O75943 681 aa22.92■■□□□ 1.26
RETREG3-210ENST00000590541 DGKZQ13574 1117 aa22.92■■□□□ 1.26
RETREG3-210ENST00000590541 DPP8Q6V1X1 898 aaPredicted RBP22.92■■□□□ 1.26
RETREG3-210ENST00000590541 CDC37L1Q7L3B6 337 aa22.92■■□□□ 1.26
RETREG3-210ENST00000590541 SP8Q8IXZ3 490 aa22.92■■□□□ 1.26
RETREG3-210ENST00000590541 UTP14AQ9BVJ6 771 aaKnown RBP22.92■■□□□ 1.26
RETREG3-210ENST00000590541 SHTN1A0MZ66 631 aa22.91■■□□□ 1.26
RETREG3-210ENST00000590541 MPNDQ8N594 471 aa22.91■■□□□ 1.26
RETREG3-210ENST00000590541 BCL2L13Q9BXK5 485 aa22.91■■□□□ 1.26
RETREG3-210ENST00000590541 BBOX1O75936 387 aa22.9■■□□□ 1.26
RETREG3-210ENST00000590541 PDIA6Q15084 440 aa22.9■■□□□ 1.26
RETREG3-210ENST00000590541 PCDH10Q9P2E7 1040 aa22.9■■□□□ 1.26
RETREG3-210ENST00000590541 LAMB2P55268 1798 aa22.89■■□□□ 1.26
RETREG3-210ENST00000590541 YDJCA8MPS7 323 aa22.89■■□□□ 1.25
RETREG3-210ENST00000590541 NOGQ13253 232 aa22.89■■□□□ 1.25
RETREG3-210ENST00000590541 TNIP1Q15025 636 aa22.89■■□□□ 1.25
RETREG3-210ENST00000590541 PLEKHF1Q96S99 279 aa22.89■■□□□ 1.25
RETREG3-210ENST00000590541 CNOT7Q9UIV1 285 aaKnown RBP22.89■■□□□ 1.25
RETREG3-210ENST00000590541 DLK2Q6UY11 383 aa22.88■■□□□ 1.25
RETREG3-210ENST00000590541 ANKRD36CQ5JPF3 1778 aa22.87■■□□□ 1.25
RETREG3-210ENST00000590541 HUNKP57058 714 aa22.87■■□□□ 1.25
RETREG3-210ENST00000590541 USP48Q86UV5 1035 aa22.87■■□□□ 1.25
RETREG3-210ENST00000590541 DUOX1Q9NRD9 1551 aa22.86■■□□□ 1.25
RETREG3-210ENST00000590541 NEFMP07197 916 aa22.86■■□□□ 1.25
RETREG3-210ENST00000590541 HCLS1P14317 486 aaPredicted RBP22.86■■□□□ 1.25
RETREG3-210ENST00000590541 NFE2L2Q16236 605 aa22.86■■□□□ 1.25
RETREG3-210ENST00000590541 PROSER3Q2NL68 480 aa22.86■■□□□ 1.25
RETREG3-210ENST00000590541 MICALL2Q8IY33 904 aa22.86■■□□□ 1.25
RETREG3-210ENST00000590541 ANXA1P04083 346 aa22.85■■□□□ 1.25
RETREG3-210ENST00000590541 ZBTB12Q9Y330 459 aaPredicted RBP22.85■■□□□ 1.25
RETREG3-210ENST00000590541 TNRC18O15417 2968 aaPredicted RBP22.84■■□□□ 1.25
RETREG3-210ENST00000590541 FAM155AB1AL88 458 aaPredicted RBP22.84■■□□□ 1.25
RETREG3-210ENST00000590541 H7C1D1 291 aa22.84■■□□□ 1.25
RETREG3-210ENST00000590541 EIF2S2P20042 333 aaKnown RBP22.84■■□□□ 1.25
RETREG3-210ENST00000590541 GRAPQ13588 217 aa22.84■■□□□ 1.25
RETREG3-210ENST00000590541 NLRP10Q86W26 655 aa22.84■■□□□ 1.25
RETREG3-210ENST00000590541 GRAPLQ8TC17 118 aaPredicted RBP22.84■■□□□ 1.25
RETREG3-210ENST00000590541 DDX46Q7L014 1031 aaKnown RBP22.83■■□□□ 1.25
RETREG3-210ENST00000590541 SAMD7Q7Z3H4 446 aa22.83■■□□□ 1.25
RETREG3-210ENST00000590541 TAF1P21675 1872 aa22.82■■□□□ 1.24
RETREG3-210ENST00000590541 RGMBQ6NW40 437 aa22.82■■□□□ 1.24
RETREG3-210ENST00000590541 DPF2Q92785 391 aa22.82■■□□□ 1.24
RETREG3-210ENST00000590541 TSPYL4Q9UJ04 414 aa22.82■■□□□ 1.24
RETREG3-210ENST00000590541 PSMD14O00487 310 aa22.81■■□□□ 1.24
RETREG3-210ENST00000590541 EGFRP00533 1210 aa22.81■■□□□ 1.24
RETREG3-210ENST00000590541 LRRC37AA6NMS7 1700 aa22.81■■□□□ 1.24
RETREG3-210ENST00000590541 HSP90AB3PQ58FF7 597 aa22.8■■□□□ 1.24
RETREG3-210ENST00000590541 COPS6Q7L5N1 327 aa22.8■■□□□ 1.24
RETREG3-210ENST00000590541 KRT26Q7Z3Y9 468 aa22.8■■□□□ 1.24
RETREG3-210ENST00000590541 GBA2Q9HCG7 927 aaPredicted RBP22.8■■□□□ 1.24
RETREG3-210ENST00000590541 SAGE1Q9NXZ1 904 aa22.8■■□□□ 1.24
RETREG3-210ENST00000590541 TRMT112Q9UI30 125 aaKnown RBP22.8■■□□□ 1.24
RETREG3-210ENST00000590541 KIF23Q02241 960 aaPredicted RBP22.79■■□□□ 1.24
RETREG3-210ENST00000590541 TCIRG1Q13488 830 aa22.79■■□□□ 1.24
RETREG3-210ENST00000590541 TBC1D10BQ4KMP7 808 aaPredicted RBP22.79■■□□□ 1.24
RETREG3-210ENST00000590541 TMC4Q7Z404 712 aa22.79■■□□□ 1.24
RETREG3-210ENST00000590541 SH3TC1Q8TE82 1336 aa22.79■■□□□ 1.24
RETREG3-210ENST00000590541 AIMP1Q12904 312 aaKnown RBP22.78■■□□□ 1.24
RETREG3-210ENST00000590541 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
RETREG3-210ENST00000590541 C2orf69Q8N8R5 385 aa22.78■■□□□ 1.24
RETREG3-210ENST00000590541 XAGE3Q8WTP9 111 aa22.78■■□□□ 1.24
RETREG3-210ENST00000590541 DBNDD1Q9H9R9 158 aa22.78■■□□□ 1.24
RETREG3-210ENST00000590541 ADM5C9JUS6 153 aa22.77■■□□□ 1.24
RETREG3-210ENST00000590541 SOX10P56693 466 aa22.77■■□□□ 1.24
RETREG3-210ENST00000590541 CCDC102AQ96A19 550 aa22.77■■□□□ 1.24
RETREG3-210ENST00000590541 RNF186Q9NXI6 227 aa22.77■■□□□ 1.24
RETREG3-210ENST00000590541 NECTIN2Q92692 538 aa22.76■■□□□ 1.23
RETREG3-210ENST00000590541 KCNQ5Q9NR82 932 aa22.76■■□□□ 1.23
RETREG3-210ENST00000590541 POLR2AP24928 1970 aaKnown RBP22.76■■□□□ 1.23
RETREG3-210ENST00000590541 RIMBP2O15034 1052 aa22.75■■□□□ 1.23
RETREG3-210ENST00000590541 TRPA1O75762 1119 aa22.75■■□□□ 1.23
RETREG3-210ENST00000590541 ZNF157P51786 506 aaPredicted RBP22.75■■□□□ 1.23
RETREG3-210ENST00000590541 RBM26Q5T8P6 1007 aaKnown RBP22.75■■□□□ 1.23
RETREG3-210ENST00000590541 CELF1Q92879 486 aaKnown RBP22.75■■□□□ 1.23
RETREG3-210ENST00000590541 ZNF428Q96B54 188 aa22.75■■□□□ 1.23
RETREG3-210ENST00000590541 DCPSQ96C86 337 aaKnown RBP22.75■■□□□ 1.23
RETREG3-210ENST00000590541 POLLQ9UGP5 575 aa22.75■■□□□ 1.23
RETREG3-210ENST00000590541 NSFL1CQ9UNZ2 370 aaKnown RBP22.75■■□□□ 1.23
RETREG3-210ENST00000590541 MAPK8IP3Q9UPT6 1336 aa22.75■■□□□ 1.23
RETREG3-210ENST00000590541 RTL9Q8NET4 1388 aa22.75■■□□□ 1.23
RETREG3-210ENST00000590541 COL4A1P02462 1669 aa22.74■■□□□ 1.23
RETREG3-210ENST00000590541 DDX60Q8IY21 1712 aaKnown RBP22.74■■□□□ 1.23
RETREG3-210ENST00000590541 RPS12P25398 132 aaKnown RBP22.74■■□□□ 1.23
RETREG3-210ENST00000590541 ECE2O60344 883 aa22.73■■□□□ 1.23
RETREG3-210ENST00000590541 SLC10A3P09131 477 aa22.73■■□□□ 1.23
RETREG3-210ENST00000590541 CSRNP1Q96S65 589 aa22.73■■□□□ 1.23
RETREG3-210ENST00000590541 BABAM1Q9NWV8 329 aa22.73■■□□□ 1.23
RETREG3-210ENST00000590541 GPSM2P81274 684 aa22.72■■□□□ 1.23
RETREG3-210ENST00000590541 PNNQ9H307 717 aaKnown RBP22.72■■□□□ 1.23
RETREG3-210ENST00000590541 PDE4DIPQ5VU43 2346 aa22.71■■□□□ 1.23
RETREG3-210ENST00000590541 C6orf229H3BNL8 230 aa22.71■■□□□ 1.23
RETREG3-210ENST00000590541 SF3B3Q15393 1217 aaKnown RBP22.71■■□□□ 1.23
RETREG3-210ENST00000590541 DOK7Q18PE1 504 aa22.71■■□□□ 1.23
RETREG3-210ENST00000590541 KIF4BQ2VIQ3 1234 aa22.71■■□□□ 1.23
RETREG3-210ENST00000590541 RIPK4P57078 832 aa22.7■■□□□ 1.22
RETREG3-210ENST00000590541 GGA3Q9NZ52 723 aa22.7■■□□□ 1.22
RETREG3-210ENST00000590541 ASTN2O75129 1339 aaPredicted RBP22.7■■□□□ 1.22
RETREG3-210ENST00000590541 AKAP11Q9UKA4 1901 aa22.69■■□□□ 1.22
RETREG3-210ENST00000590541 FAM89AQ96GI7 184 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms