RNA–Protein interactions for RNA: ENST00000590418.1

PPM1D-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 4

Gene PPM1D, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-203ENST00000590418 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
PPM1D-203ENST00000590418 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
PPM1D-203ENST00000590418 CSF1RP07333 972 aa17.04■□□□□ 0.32
PPM1D-203ENST00000590418 MTX1Q13505 466 aa17.04■□□□□ 0.32
PPM1D-203ENST00000590418 LMBR1LQ6UX01 489 aa17.04■□□□□ 0.32
PPM1D-203ENST00000590418 RPGRQ92834 1020 aaKnown RBP17.04■□□□□ 0.32
PPM1D-203ENST00000590418 CD2APQ9Y5K6 639 aa17.04■□□□□ 0.32
PPM1D-203ENST00000590418 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
PPM1D-203ENST00000590418 C3orf67Q6ZVT6 689 aa17.03■□□□□ 0.32
PPM1D-203ENST00000590418 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
PPM1D-203ENST00000590418 PPP1R1BQ9UD71 204 aaPredicted RBP17.03■□□□□ 0.32
PPM1D-203ENST00000590418 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
PPM1D-203ENST00000590418 H0YIN7 160 aa17.02■□□□□ 0.32
PPM1D-203ENST00000590418 TGFB2P61812 414 aa17.02■□□□□ 0.32
PPM1D-203ENST00000590418 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
PPM1D-203ENST00000590418 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.32
PPM1D-203ENST00000590418 SRGNP10124 158 aa17.01■□□□□ 0.31
PPM1D-203ENST00000590418 NPR1P16066 1061 aa17.01■□□□□ 0.31
PPM1D-203ENST00000590418 ATP8B2P98198 1209 aa17.01■□□□□ 0.31
PPM1D-203ENST00000590418 IFIT5Q13325 482 aaKnown RBP17.01■□□□□ 0.31
PPM1D-203ENST00000590418 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
PPM1D-203ENST00000590418 FAM161AQ3B820 660 aa17.01■□□□□ 0.31
PPM1D-203ENST00000590418 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
PPM1D-203ENST00000590418 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
PPM1D-203ENST00000590418 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
PPM1D-203ENST00000590418 GREM2Q9H772 168 aa17.01■□□□□ 0.31
PPM1D-203ENST00000590418 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
PPM1D-203ENST00000590418 SRGAP3O43295 1099 aa17■□□□□ 0.31
PPM1D-203ENST00000590418 HMMRO75330 724 aa17■□□□□ 0.31
PPM1D-203ENST00000590418 ITGA6P23229 1130 aa17■□□□□ 0.31
PPM1D-203ENST00000590418 HOXA10P31260 410 aaPredicted RBP17■□□□□ 0.31
PPM1D-203ENST00000590418 STYK1Q6J9G0 422 aa17■□□□□ 0.31
PPM1D-203ENST00000590418 KLHL34Q8N239 644 aa17■□□□□ 0.31
PPM1D-203ENST00000590418 MASTLQ96GX5 879 aa17■□□□□ 0.31
PPM1D-203ENST00000590418 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
PPM1D-203ENST00000590418 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
PPM1D-203ENST00000590418 CRAMP1Q96RY5 1269 aa16.99■□□□□ 0.31
PPM1D-203ENST00000590418 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
PPM1D-203ENST00000590418 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
PPM1D-203ENST00000590418 ALDH1B1P30837 517 aa16.98■□□□□ 0.31
PPM1D-203ENST00000590418 POLA2Q14181 598 aa16.98■□□□□ 0.31
PPM1D-203ENST00000590418 TAF7LQ5H9L4 462 aa16.98■□□□□ 0.31
PPM1D-203ENST00000590418 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
PPM1D-203ENST00000590418 PCDHB15Q9Y5E8 787 aa16.98■□□□□ 0.31
PPM1D-203ENST00000590418 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
PPM1D-203ENST00000590418 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
PPM1D-203ENST00000590418 CHRNA5P30532 468 aa16.97■□□□□ 0.31
PPM1D-203ENST00000590418 GRAPQ13588 217 aa16.97■□□□□ 0.31
PPM1D-203ENST00000590418 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
PPM1D-203ENST00000590418 CNKSR1Q969H4 720 aa16.97■□□□□ 0.31
PPM1D-203ENST00000590418 ZNF622Q969S3 477 aaKnown RBP eCLIP16.97■□□□□ 0.31
PPM1D-203ENST00000590418 FHDC1Q9C0D6 1143 aaPredicted RBP16.97■□□□□ 0.31
PPM1D-203ENST00000590418 SEC31BQ9NQW1 1179 aa16.97■□□□□ 0.31
PPM1D-203ENST00000590418 DPEP1P16444 411 aa16.96■□□□□ 0.31
PPM1D-203ENST00000590418 IGHMBP2P38935 993 aaKnown RBP16.96■□□□□ 0.31
PPM1D-203ENST00000590418 RFX5P48382 616 aaPredicted RBP16.96■□□□□ 0.31
PPM1D-203ENST00000590418 ANKRD18AQ8IVF6 992 aa16.96■□□□□ 0.31
PPM1D-203ENST00000590418 SIRT2Q8IXJ6 389 aa16.96■□□□□ 0.31
PPM1D-203ENST00000590418 TAF1P21675 1872 aa16.96■□□□□ 0.31
PPM1D-203ENST00000590418 COL4A1P02462 1669 aa16.95■□□□□ 0.3
PPM1D-203ENST00000590418 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
PPM1D-203ENST00000590418 TMC4Q7Z404 712 aa16.95■□□□□ 0.3
PPM1D-203ENST00000590418 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
PPM1D-203ENST00000590418 LRRC37AA6NMS7 1700 aa16.94■□□□□ 0.3
PPM1D-203ENST00000590418 BBOX1O75936 387 aa16.94■□□□□ 0.3
PPM1D-203ENST00000590418 KCNA3P22001 575 aa16.94■□□□□ 0.3
PPM1D-203ENST00000590418 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
PPM1D-203ENST00000590418 PTPN12Q05209 780 aaKnown RBP16.94■□□□□ 0.3
PPM1D-203ENST00000590418 HDAC1Q13547 482 aaPredicted RBP16.94■□□□□ 0.3
PPM1D-203ENST00000590418 CELF1Q92879 486 aaKnown RBP16.94■□□□□ 0.3
PPM1D-203ENST00000590418 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
PPM1D-203ENST00000590418 RWDD1Q9H446 243 aaPredicted RBP16.94■□□□□ 0.3
PPM1D-203ENST00000590418 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
PPM1D-203ENST00000590418 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
PPM1D-203ENST00000590418 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
PPM1D-203ENST00000590418 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
PPM1D-203ENST00000590418 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
PPM1D-203ENST00000590418 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
PPM1D-203ENST00000590418 ZNF594Q96JF6 807 aaPredicted RBP16.93■□□□□ 0.3
PPM1D-203ENST00000590418 SYT17Q9BSW7 474 aa16.93■□□□□ 0.3
PPM1D-203ENST00000590418 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
PPM1D-203ENST00000590418 SLX4Q8IY92 1834 aa16.92■□□□□ 0.3
PPM1D-203ENST00000590418 CIAO1O76071 339 aa16.92■□□□□ 0.3
PPM1D-203ENST00000590418 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
PPM1D-203ENST00000590418 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
PPM1D-203ENST00000590418 KLHDC4Q8TBB5 520 aa16.92■□□□□ 0.3
PPM1D-203ENST00000590418 CNNM1Q9NRU3 951 aa16.92■□□□□ 0.3
PPM1D-203ENST00000590418 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
PPM1D-203ENST00000590418 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
PPM1D-203ENST00000590418 EYA2O00167 538 aa16.91■□□□□ 0.3
PPM1D-203ENST00000590418 SURF6O75683 361 aaKnown RBP16.91■□□□□ 0.3
PPM1D-203ENST00000590418 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
PPM1D-203ENST00000590418 SIL1Q9H173 461 aa16.91■□□□□ 0.3
PPM1D-203ENST00000590418 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
PPM1D-203ENST00000590418 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
PPM1D-203ENST00000590418 G3BP1Q13283 466 aaKnown RBP eCLIP16.9■□□□□ 0.3
PPM1D-203ENST00000590418 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
PPM1D-203ENST00000590418 ATP6V0A2Q9Y487 856 aa16.9■□□□□ 0.3
PPM1D-203ENST00000590418 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
PPM1D-203ENST00000590418 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms