RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 EGFRP00533 1210 aa17.03■□□□□ 0.32
NEDD4L-227ENST00000590020 ZNF157P51786 506 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-227ENST00000590020 ZNF34Q8IZ26 560 aa17.03■□□□□ 0.32
NEDD4L-227ENST00000590020 SUPT20HQ8NEM7 779 aa17.03■□□□□ 0.32
NEDD4L-227ENST00000590020 RTFDC1Q9BY42 306 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-227ENST00000590020 GBA2Q9HCG7 927 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-227ENST00000590020 SAGE1Q9NXZ1 904 aa17.03■□□□□ 0.32
NEDD4L-227ENST00000590020 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 H7C1D1 291 aa17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 KIAA2012Q0VF49 1180 aa17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 TNIP1Q15025 636 aa17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 MPNDQ8N594 471 aa17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 NLRP3Q96P20 1036 aa17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 VPS33BQ9H267 617 aa17.02■□□□□ 0.32
NEDD4L-227ENST00000590020 POLR2AP24928 1970 aaKnown RBP17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 KRT26Q7Z3Y9 468 aa17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 CTU1Q7Z7A3 348 aaKnown RBP17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 C2orf69Q8N8R5 385 aa17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 HPS5Q9UPZ3 1129 aa17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 AKAP11Q9UKA4 1901 aa17.01■□□□□ 0.31
NEDD4L-227ENST00000590020 CSRNP1Q96S65 589 aa17■□□□□ 0.31
NEDD4L-227ENST00000590020 LAMB2P55268 1798 aa17■□□□□ 0.31
NEDD4L-227ENST00000590020 TAF1P21675 1872 aa16.99■□□□□ 0.31
NEDD4L-227ENST00000590020 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
NEDD4L-227ENST00000590020 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
NEDD4L-227ENST00000590020 PPP1R42Q7Z4L9 355 aa16.99■□□□□ 0.31
NEDD4L-227ENST00000590020 SP8Q8IXZ3 490 aa16.99■□□□□ 0.31
NEDD4L-227ENST00000590020 CCDC102AQ96A19 550 aa16.99■□□□□ 0.31
NEDD4L-227ENST00000590020 PCGF6Q9BYE7 350 aa16.99■□□□□ 0.31
NEDD4L-227ENST00000590020 PSMD14O00487 310 aa16.98■□□□□ 0.31
NEDD4L-227ENST00000590020 GIGYF2Q6Y7W6 1299 aaKnown RBP16.98■□□□□ 0.31
NEDD4L-227ENST00000590020 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
NEDD4L-227ENST00000590020 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
NEDD4L-227ENST00000590020 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
NEDD4L-227ENST00000590020 SLC10A3P09131 477 aa16.97■□□□□ 0.31
NEDD4L-227ENST00000590020 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
NEDD4L-227ENST00000590020 UTP14AQ9BVJ6 771 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-227ENST00000590020 DBNDD1Q9H9R9 158 aa16.97■□□□□ 0.31
NEDD4L-227ENST00000590020 KCNQ5Q9NR82 932 aa16.97■□□□□ 0.31
NEDD4L-227ENST00000590020 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
NEDD4L-227ENST00000590020 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.31
NEDD4L-227ENST00000590020 BBOX1O75936 387 aa16.96■□□□□ 0.31
NEDD4L-227ENST00000590020 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
NEDD4L-227ENST00000590020 RIMBP2O15034 1052 aa16.95■□□□□ 0.3
NEDD4L-227ENST00000590020 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
NEDD4L-227ENST00000590020 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
NEDD4L-227ENST00000590020 SLC10A5Q5PT55 438 aa16.95■□□□□ 0.3
NEDD4L-227ENST00000590020 CFAP53Q96M91 514 aa16.95■□□□□ 0.3
NEDD4L-227ENST00000590020 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
NEDD4L-227ENST00000590020 DPF2Q92785 391 aa16.94■□□□□ 0.3
NEDD4L-227ENST00000590020 NUDCQ9Y266 331 aa16.94■□□□□ 0.3
NEDD4L-227ENST00000590020 ANKRD36CQ5JPF3 1778 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 TBC1D8O95759 1140 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 ANXA1P04083 346 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 GRAPQ13588 217 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 DOK7Q18PE1 504 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 GRAPLQ8TC17 118 aaPredicted RBP16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 GGA3Q9NZ52 723 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
NEDD4L-227ENST00000590020 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
NEDD4L-227ENST00000590020 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
NEDD4L-227ENST00000590020 ZNF296Q8WUU4 475 aaPredicted RBP16.92■□□□□ 0.3
NEDD4L-227ENST00000590020 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
NEDD4L-227ENST00000590020 DLG5Q8TDM6 1919 aa16.92■□□□□ 0.3
NEDD4L-227ENST00000590020 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
NEDD4L-227ENST00000590020 PROSER3Q2NL68 480 aa16.91■□□□□ 0.3
NEDD4L-227ENST00000590020 KIF4BQ2VIQ3 1234 aa16.91■□□□□ 0.3
NEDD4L-227ENST00000590020 SULF1Q8IWU6 871 aa16.91■□□□□ 0.3
NEDD4L-227ENST00000590020 SCAF8Q9UPN6 1271 aaKnown RBP16.91■□□□□ 0.3
NEDD4L-227ENST00000590020 ECE2O60344 883 aa16.9■□□□□ 0.3
NEDD4L-227ENST00000590020 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-227ENST00000590020 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
NEDD4L-227ENST00000590020 LRP10Q7Z4F1 713 aa16.9■□□□□ 0.3
NEDD4L-227ENST00000590020 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
NEDD4L-227ENST00000590020 COL4A1P02462 1669 aa16.9■□□□□ 0.3
NEDD4L-227ENST00000590020 LRRC37AA6NMS7 1700 aa16.9■□□□□ 0.3
NEDD4L-227ENST00000590020 C6orf229H3BNL8 230 aa16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 PDIA6Q15084 440 aa16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 NLRP10Q86W26 655 aa16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 PNISRQ8TF01 805 aaKnown RBP16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 POLLQ9UGP5 575 aa16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 CLSPNQ9HAW4 1339 aa16.89■□□□□ 0.29
NEDD4L-227ENST00000590020 AIMP1Q12904 312 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-227ENST00000590020 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-227ENST00000590020 ANGEL2Q5VTE6 544 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-227ENST00000590020 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
NEDD4L-227ENST00000590020 RPS12P25398 132 aaKnown RBP16.87■□□□□ 0.29
NEDD4L-227ENST00000590020 GPSM2P81274 684 aa16.87■□□□□ 0.29
NEDD4L-227ENST00000590020 MKRN3Q13064 507 aaKnown RBP16.87■□□□□ 0.29
NEDD4L-227ENST00000590020 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
NEDD4L-227ENST00000590020 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms