RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SPTBN5Q9NRC6 3674 aaKnown RBP8.33□□□□□ -1.08
VPS25-204ENST00000589577 ANKRD36CQ5JPF3 1778 aa8.33□□□□□ -1.08
VPS25-204ENST00000589577 NBPF26B4DH59 902 aa8.33□□□□□ -1.08
VPS25-204ENST00000589577 RGL2O15211 777 aa8.33□□□□□ -1.08
VPS25-204ENST00000589577 HMOX1P09601 288 aa8.33□□□□□ -1.08
VPS25-204ENST00000589577 EN2P19622 333 aaPredicted RBP8.33□□□□□ -1.08
VPS25-204ENST00000589577 NBPF10Q6P3W6 841 aaKnown RBP8.33□□□□□ -1.08
VPS25-204ENST00000589577 REM2Q8IYK8 340 aaPredicted RBP8.33□□□□□ -1.08
VPS25-204ENST00000589577 IL17REQ8NFR9 667 aa8.33□□□□□ -1.08
VPS25-204ENST00000589577 BCL2L13Q9BXK5 485 aa8.33□□□□□ -1.08
VPS25-204ENST00000589577 VPS33BQ9H267 617 aa8.33□□□□□ -1.08
VPS25-204ENST00000589577 ZBTB12Q9Y330 459 aaPredicted RBP8.33□□□□□ -1.08
VPS25-204ENST00000589577 EYSQ5T1H1 3165 aa8.32□□□□□ -1.08
VPS25-204ENST00000589577 ASTN2O75129 1339 aaPredicted RBP8.32□□□□□ -1.08
VPS25-204ENST00000589577 KIAA2012Q0VF49 1180 aa8.32□□□□□ -1.08
VPS25-204ENST00000589577 TBC1D10BQ4KMP7 808 aaPredicted RBP8.32□□□□□ -1.08
VPS25-204ENST00000589577 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
VPS25-204ENST00000589577 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
VPS25-204ENST00000589577 CRAMP1Q96RY5 1269 aa8.32□□□□□ -1.08
VPS25-204ENST00000589577 H0YGN5 161 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 H7C1D1 291 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 TNIP1Q15025 636 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 MOB2Q70IA6 237 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 NPM2Q86SE8 214 aaKnown RBP8.31□□□□□ -1.08
VPS25-204ENST00000589577 CDCA5Q96FF9 252 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 CFHR5Q9BXR6 569 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 ATP6V0A2Q9Y487 856 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 CEMIPQ8WUJ3 1361 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 IBTKQ9P2D0 1353 aaPredicted RBP8.31□□□□□ -1.08
VPS25-204ENST00000589577 PSME4Q14997 1843 aa8.31□□□□□ -1.08
VPS25-204ENST00000589577 COL4A1P02462 1669 aa8.3□□□□□ -1.08
VPS25-204ENST00000589577 UBN2Q6ZU65 1347 aa8.3□□□□□ -1.08
VPS25-204ENST00000589577 FKTNO75072 461 aa8.3□□□□□ -1.08
VPS25-204ENST00000589577 GTF2E1P29083 439 aaPredicted RBP8.3□□□□□ -1.08
VPS25-204ENST00000589577 TM4SF4P48230 202 aa8.3□□□□□ -1.08
VPS25-204ENST00000589577 MNX1P50219 401 aaPredicted RBP8.3□□□□□ -1.08
VPS25-204ENST00000589577 INTS3Q68E01 1043 aaKnown RBP8.3□□□□□ -1.08
VPS25-204ENST00000589577 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
VPS25-204ENST00000589577 DPF2Q92785 391 aa8.3□□□□□ -1.08
VPS25-204ENST00000589577 GGA3Q9NZ52 723 aa8.3□□□□□ -1.08
VPS25-204ENST00000589577 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
VPS25-204ENST00000589577 ABCC4O15439 1325 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 PITPNM2Q9BZ72 1349 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 ZNF609O15014 1411 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 PSMD14O00487 310 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 TEFQ10587 303 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 OTOP1Q7RTM1 612 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 ARMC5Q96C12 935 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 DCPSQ96C86 337 aaKnown RBP8.29□□□□□ -1.08
VPS25-204ENST00000589577 RBM17Q96I25 401 aaKnown RBP8.29□□□□□ -1.08
VPS25-204ENST00000589577 RTL9Q8NET4 1388 aa8.29□□□□□ -1.08
VPS25-204ENST00000589577 MUC3AQ02505 3323 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 NTSR2O95665 410 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 CAP1Q01518 475 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 RBM26Q5T8P6 1007 aaKnown RBP8.28□□□□□ -1.08
VPS25-204ENST00000589577 SUSD4Q5VX71 490 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 DPP8Q6V1X1 898 aaPredicted RBP8.28□□□□□ -1.08
VPS25-204ENST00000589577 SUPT20HQ8NEM7 779 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
VPS25-204ENST00000589577 NYXQ9GZU5 481 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 PRO3102Q9H379 93 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 TRIM17Q9Y577 477 aa8.28□□□□□ -1.08
VPS25-204ENST00000589577 ZNF646O15015 1829 aaPredicted RBP8.28□□□□□ -1.08
VPS25-204ENST00000589577 COL3A1P02461 1466 aaPredicted RBP8.27□□□□□ -1.09
VPS25-204ENST00000589577 PRUNE2Q8WUY3 3088 aa8.27□□□□□ -1.09
VPS25-204ENST00000589577 FKBP1BP68106 108 aa8.27□□□□□ -1.09
VPS25-204ENST00000589577 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
VPS25-204ENST00000589577 SULF1Q8IWU6 871 aa8.27□□□□□ -1.09
VPS25-204ENST00000589577 KCNQ5Q9NR82 932 aa8.27□□□□□ -1.09
VPS25-204ENST00000589577 PTPN22Q9Y2R2 807 aa8.27□□□□□ -1.09
VPS25-204ENST00000589577 ZSWIM8A7E2V4 1837 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 LAMA2P24043 3122 aaKnown RBP8.26□□□□□ -1.09
VPS25-204ENST00000589577 BTBD11A6QL63 1104 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 GNAT3A8MTJ3 354 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 UBE2Q2LH0YL09 131 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 SOX1O00570 391 aaPredicted RBP8.26□□□□□ -1.09
VPS25-204ENST00000589577 GPTP24298 496 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 MKRN3Q13064 507 aaKnown RBP8.26□□□□□ -1.09
VPS25-204ENST00000589577 MORC1Q86VD1 984 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 SP8Q8IXZ3 490 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 MPNDQ8N594 471 aa8.26□□□□□ -1.09
VPS25-204ENST00000589577 SCAF8Q9UPN6 1271 aaKnown RBP8.26□□□□□ -1.09
VPS25-204ENST00000589577 SNRPA1P09661 255 aaKnown RBP8.25□□□□□ -1.09
VPS25-204ENST00000589577 RPS12P25398 132 aaKnown RBP8.25□□□□□ -1.09
VPS25-204ENST00000589577 ANGEL2Q5VTE6 544 aaKnown RBP8.25□□□□□ -1.09
VPS25-204ENST00000589577 ZNF333Q96JL9 665 aa8.25□□□□□ -1.09
VPS25-204ENST00000589577 COL25A1Q9BXS0 654 aaPredicted RBP8.25□□□□□ -1.09
VPS25-204ENST00000589577 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
VPS25-204ENST00000589577 MAP3K15Q6ZN16 1313 aa8.25□□□□□ -1.09
VPS25-204ENST00000589577 ERVV-1B6SEH8 477 aa8.24□□□□□ -1.09
VPS25-204ENST00000589577 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
VPS25-204ENST00000589577 POTEDQ86YR6 584 aa8.24□□□□□ -1.09
VPS25-204ENST00000589577 ZNF34Q8IZ26 560 aa8.24□□□□□ -1.09
VPS25-204ENST00000589577 LRCH3Q96II8 777 aa8.24□□□□□ -1.09
VPS25-204ENST00000589577 PANK3Q9H999 370 aa8.24□□□□□ -1.09
VPS25-204ENST00000589577 CLSPNQ9HAW4 1339 aa8.24□□□□□ -1.09
VPS25-204ENST00000589577 SREBF2Q12772 1141 aa8.23□□□□□ -1.09
VPS25-204ENST00000589577 SCARF1Q14162 830 aa8.23□□□□□ -1.09
VPS25-204ENST00000589577 PRAMEF18Q5VWM3 479 aa8.23□□□□□ -1.09
VPS25-204ENST00000589577 CD99L2Q8TCZ2 262 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms