RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 ABCC4O15439 1325 aa11.64□□□□□ -0.55
ZNF440-206ENST00000588954 ALDH1B1P30837 517 aa11.64□□□□□ -0.55
ZNF440-206ENST00000588954 CRY2Q49AN0 593 aa11.64□□□□□ -0.55
ZNF440-206ENST00000588954 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
ZNF440-206ENST00000588954 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
ZNF440-206ENST00000588954 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
ZNF440-206ENST00000588954 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
ZNF440-206ENST00000588954 KCNA3P22001 575 aa11.63□□□□□ -0.55
ZNF440-206ENST00000588954 SF3B3Q15393 1217 aaKnown RBP11.63□□□□□ -0.55
ZNF440-206ENST00000588954 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
ZNF440-206ENST00000588954 TMX4Q9H1E5 349 aaPredicted RBP11.63□□□□□ -0.55
ZNF440-206ENST00000588954 WWC3Q9ULE0 1092 aa11.63□□□□□ -0.55
ZNF440-206ENST00000588954 BCS1LQ9Y276 419 aa11.63□□□□□ -0.55
ZNF440-206ENST00000588954 GNAI3P08754 354 aa11.62□□□□□ -0.55
ZNF440-206ENST00000588954 UBTFL1P0CB47 393 aaPredicted RBP11.62□□□□□ -0.55
ZNF440-206ENST00000588954 HOXA10P31260 410 aaPredicted RBP11.62□□□□□ -0.55
ZNF440-206ENST00000588954 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
ZNF440-206ENST00000588954 PLA2G12BQ9BX93 195 aa11.62□□□□□ -0.55
ZNF440-206ENST00000588954 PLIN1O60240 522 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
ZNF440-206ENST00000588954 CASP7P55210 303 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 CTSWP56202 376 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 USP44Q9H0E7 712 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
ZNF440-206ENST00000588954 UTYO14607 1347 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 SRCAPQ6ZRS2 3230 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 N4BP2Q86UW6 1770 aaPredicted RBP11.6□□□□□ -0.55
ZNF440-206ENST00000588954 BBOX1O75936 387 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 GRAPQ13588 217 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 PDE3AQ14432 1141 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 PRPF40BQ6NWY9 871 aaKnown RBP11.6□□□□□ -0.55
ZNF440-206ENST00000588954 TTLL11Q8NHH1 800 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
ZNF440-206ENST00000588954 CHMP4BQ9H444 224 aaKnown RBP11.6□□□□□ -0.55
ZNF440-206ENST00000588954 TNNQ9UQP3 1299 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 CHMP3Q9Y3E7 222 aa11.6□□□□□ -0.55
ZNF440-206ENST00000588954 TMC4Q7Z404 712 aa11.59□□□□□ -0.55
ZNF440-206ENST00000588954 PANK1Q8TE04 598 aa11.59□□□□□ -0.55
ZNF440-206ENST00000588954 SUCLG2Q96I99 432 aa11.59□□□□□ -0.55
ZNF440-206ENST00000588954 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
ZNF440-206ENST00000588954 CDC5LQ99459 802 aaKnown RBP11.59□□□□□ -0.55
ZNF440-206ENST00000588954 ANKRD18BA2A2Z9 1011 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 PPEF1O14829 653 aaPredicted RBP11.58□□□□□ -0.56
ZNF440-206ENST00000588954 C21orf2O43822 256 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 CSF1RP07333 972 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 RLBP1P12271 317 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 YBX3P16989 372 aaKnown RBP eCLIP11.58□□□□□ -0.56
ZNF440-206ENST00000588954 RRP1P56182 461 aaKnown RBP11.58□□□□□ -0.56
ZNF440-206ENST00000588954 RPS8P62241 208 aaKnown RBP11.58□□□□□ -0.56
ZNF440-206ENST00000588954 FOXO4P98177 505 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
ZNF440-206ENST00000588954 CCDC57Q2TAC2 916 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 TAF7LQ5H9L4 462 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 CC2D2BQ6DHV5 1058 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 LMBR1LQ6UX01 489 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 MEIS3Q99687 375 aa11.58□□□□□ -0.56
ZNF440-206ENST00000588954 TNRC6CQ9HCJ0 1690 aaKnown RBP11.58□□□□□ -0.56
ZNF440-206ENST00000588954 GNAI2P04899 355 aa11.57□□□□□ -0.56
ZNF440-206ENST00000588954 ITGA6P23229 1130 aa11.57□□□□□ -0.56
ZNF440-206ENST00000588954 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
ZNF440-206ENST00000588954 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
ZNF440-206ENST00000588954 ARHGAP27Q6ZUM4 889 aa11.57□□□□□ -0.56
ZNF440-206ENST00000588954 BICC1Q9H694 974 aaKnown RBP11.57□□□□□ -0.56
ZNF440-206ENST00000588954 GREM2Q9H772 168 aa11.57□□□□□ -0.56
ZNF440-206ENST00000588954 DDX19BQ9UMR2 479 aa11.57□□□□□ -0.56
ZNF440-206ENST00000588954 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
ZNF440-206ENST00000588954 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
ZNF440-206ENST00000588954 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
ZNF440-206ENST00000588954 LAMB2P55268 1798 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
ZNF440-206ENST00000588954 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 CCDC93Q567U6 631 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 EPHA10Q5JZY3 1008 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 SP8Q8IXZ3 490 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 RTKN2Q8IZC4 609 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 MPHOSPH8Q99549 860 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 SEC31BQ9NQW1 1179 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 ATP6V0A2Q9Y487 856 aa11.56□□□□□ -0.56
ZNF440-206ENST00000588954 ZBTB7BO15156 539 aaPredicted RBP11.55□□□□□ -0.56
ZNF440-206ENST00000588954 RABL6Q3YEC7 729 aaPredicted RBP11.55□□□□□ -0.56
ZNF440-206ENST00000588954 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
ZNF440-206ENST00000588954 CELF1Q92879 486 aaKnown RBP11.55□□□□□ -0.56
ZNF440-206ENST00000588954 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
ZNF440-206ENST00000588954 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
ZNF440-206ENST00000588954 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
ZNF440-206ENST00000588954 ANKRD44Q8N8A2 993 aa11.54□□□□□ -0.56
ZNF440-206ENST00000588954 BSDC1Q9NW68 430 aaPredicted RBP11.54□□□□□ -0.56
ZNF440-206ENST00000588954 SUPT16HQ9Y5B9 1047 aaKnown RBP11.54□□□□□ -0.56
ZNF440-206ENST00000588954 BRCA1P38398 1863 aaKnown RBP11.54□□□□□ -0.56
ZNF440-206ENST00000588954 MYH3P11055 1940 aa11.54□□□□□ -0.56
ZNF440-206ENST00000588954 C20orf194Q5TEA3 1177 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms