RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
SPIDR-228ENST00000588781 CCDC8Q9H0W5 538 aaPredicted RBP8.53□□□□□ -1.04
SPIDR-228ENST00000588781 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
SPIDR-228ENST00000588781 WDR17Q8IZU2 1322 aa8.53□□□□□ -1.04
SPIDR-228ENST00000588781 SYCE3A1L190 88 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 CIAO1O76071 339 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 TPM3P06753 285 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 TPM2P07951 284 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 SYT1P21579 422 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 RPS6KB1P23443 525 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 GJB2P29033 226 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 IL15P40933 162 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-228ENST00000588781 PRIM1P49642 420 aaKnown RBP8.52□□□□□ -1.05
SPIDR-228ENST00000588781 KRT85P78386 507 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 PTH1RQ03431 593 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-228ENST00000588781 USP48Q86UV5 1035 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 CCDC83Q8IWF9 413 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 RASEFQ8IZ41 740 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 CCDC191Q8NCU4 936 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPIDR-228ENST00000588781 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-228ENST00000588781 KAZALD1Q96I82 304 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 PDLIM2Q96JY6 352 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 NAP1L5Q96NT1 182 aaPredicted RBP8.52□□□□□ -1.05
SPIDR-228ENST00000588781 HAUS7Q99871 368 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 SIL1Q9H173 461 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 RBSNQ9H1K0 784 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 BOLA2Q9H3K6 86 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 HELLSQ9NRZ9 838 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 TMEM63CQ9P1W3 806 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 ATRNO75882 1429 aa8.52□□□□□ -1.05
SPIDR-228ENST00000588781 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.05
SPIDR-228ENST00000588781 PRAMEF22A3QJZ6 481 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 H7C1W4 665 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 CYP27B1O15528 508 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 PTMAP06454 111 aaKnown RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 TERF1P54274 439 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 PTPN12Q05209 780 aaKnown RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 MCMDC2Q4G0Z9 681 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 LARP1BQ659C4 914 aaKnown RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 TOM1L2Q6ZVM7 507 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 UBE3BQ7Z3V4 1068 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 FNBP4Q8N3X1 1017 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 LLPHQ9BRT6 129 aaKnown RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 CARD10Q9BWT7 1032 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 SCAND2PQ9GZW5 306 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 TRPC5Q9UL62 973 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-228ENST00000588781 AKAP2Q9Y2D5 859 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 ELP1O95163 1332 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 SH3TC1Q8TE82 1336 aa8.51□□□□□ -1.05
SPIDR-228ENST00000588781 ARFGEF2Q9Y6D5 1785 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 PALLDQ8WX93 1383 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 ABCC12Q96J65 1359 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 SPEF2Q9C093 1822 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 VPS37CA5D8V6 355 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-228ENST00000588781 GOLGA6L4A6NEF3 574 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 ZFYP08048 801 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-228ENST00000588781 IL2RBP14784 551 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 HMGN5P82970 282 aaKnown RBP8.5□□□□□ -1.05
SPIDR-228ENST00000588781 TFCP2Q12800 502 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 LRP10Q7Z4F1 713 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 KBTBD3Q8NAB2 608 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 NEK1Q96PY6 1258 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 DSCC1Q9BVC3 393 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 IL25Q9H293 177 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 ZSCAN16Q9H4T2 348 aaPredicted RBP8.5□□□□□ -1.05
SPIDR-228ENST00000588781 CTNNA3Q9UI47 895 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 USP21Q9UK80 565 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 NOL7Q9UMY1 257 aaKnown RBP8.5□□□□□ -1.05
SPIDR-228ENST00000588781 MTMR6Q9Y217 621 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 USP16Q9Y5T5 823 aa8.5□□□□□ -1.05
SPIDR-228ENST00000588781 A0A0D9SFI3 127 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 TAF5LO75529 589 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 FGD1P98174 961 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 CHRNA2Q15822 529 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 HSP90AB3PQ58FF7 597 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 ATL3Q6DD88 541 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 LMBR1LQ6UX01 489 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 KIF6Q6ZMV9 814 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 FAM227BQ96M60 508 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 CHMP3Q9Y3E7 222 aa8.49□□□□□ -1.05
SPIDR-228ENST00000588781 GOLGA6L6A8MZA4 724 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 EYA2O00167 538 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 FIBPO43427 364 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 ZNF500O60304 480 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-228ENST00000588781 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 CAVIN2O95810 425 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 CCDC192P0DO97 292 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 HSP90B1P14625 803 aaKnown RBP8.48□□□□□ -1.05
SPIDR-228ENST00000588781 CASP7P55210 303 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 EVA1CP58658 441 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 KIAA2012Q0VF49 1180 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 TRIM28Q13263 835 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms