RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 RGMBQ6NW40 437 aa10.32□□□□□ -0.76
NFIX-211ENST00000588680 DPP8Q6V1X1 898 aaPredicted RBP10.32□□□□□ -0.76
NFIX-211ENST00000588680 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
NFIX-211ENST00000588680 MICALL2Q8IY33 904 aa10.32□□□□□ -0.76
NFIX-211ENST00000588680 SUPT20HQ8NEM7 779 aa10.32□□□□□ -0.76
NFIX-211ENST00000588680 TMX4Q9H1E5 349 aaPredicted RBP10.32□□□□□ -0.76
NFIX-211ENST00000588680 VPS33BQ9H267 617 aa10.32□□□□□ -0.76
NFIX-211ENST00000588680 PSME4Q14997 1843 aa10.32□□□□□ -0.76
NFIX-211ENST00000588680 YDJCA8MPS7 323 aa10.31□□□□□ -0.76
NFIX-211ENST00000588680 MYL6BP14649 208 aa10.31□□□□□ -0.76
NFIX-211ENST00000588680 TNIP1Q15025 636 aa10.31□□□□□ -0.76
NFIX-211ENST00000588680 ZNF34Q8IZ26 560 aa10.31□□□□□ -0.76
NFIX-211ENST00000588680 MIS18AQ9NYP9 233 aa10.31□□□□□ -0.76
NFIX-211ENST00000588680 CNOT7Q9UIV1 285 aaKnown RBP10.31□□□□□ -0.76
NFIX-211ENST00000588680 RRP7AQ9Y3A4 280 aaKnown RBP10.31□□□□□ -0.76
NFIX-211ENST00000588680 PAPPA2Q9BXP8 1791 aa10.3□□□□□ -0.76
NFIX-211ENST00000588680 ADM5C9JUS6 153 aa10.3□□□□□ -0.76
NFIX-211ENST00000588680 TRPA1O75762 1119 aa10.3□□□□□ -0.76
NFIX-211ENST00000588680 U2AF1L5P0DN76 240 aaPredicted RBP10.3□□□□□ -0.76
NFIX-211ENST00000588680 U2AF1Q01081 240 aaKnown RBP eCLIP10.3□□□□□ -0.76
NFIX-211ENST00000588680 KIF23Q02241 960 aaPredicted RBP10.3□□□□□ -0.76
NFIX-211ENST00000588680 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
NFIX-211ENST00000588680 KRT26Q7Z3Y9 468 aa10.3□□□□□ -0.76
NFIX-211ENST00000588680 CTU1Q7Z7A3 348 aaKnown RBP10.3□□□□□ -0.76
NFIX-211ENST00000588680 CFAP53Q96M91 514 aa10.3□□□□□ -0.76
NFIX-211ENST00000588680 GBA2Q9HCG7 927 aaPredicted RBP10.3□□□□□ -0.76
NFIX-211ENST00000588680 RNF186Q9NXI6 227 aa10.3□□□□□ -0.76
NFIX-211ENST00000588680 COL4A1P02462 1669 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 H7C1D1 291 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 EGFRP00533 1210 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 SLC10A3P09131 477 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
NFIX-211ENST00000588680 TBC1D10BQ4KMP7 808 aaPredicted RBP10.29□□□□□ -0.76
NFIX-211ENST00000588680 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
NFIX-211ENST00000588680 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 PPP1R42Q7Z4L9 355 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 MPNDQ8N594 471 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 NLRP3Q96P20 1036 aa10.29□□□□□ -0.76
NFIX-211ENST00000588680 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
NFIX-211ENST00000588680 TRIOBPQ9H2D6 2365 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 PSMD14O00487 310 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 HTATSF1O43719 755 aaKnown RBP10.28□□□□□ -0.76
NFIX-211ENST00000588680 TRIM26Q12899 539 aaPredicted RBP10.28□□□□□ -0.76
NFIX-211ENST00000588680 PARP10Q53GL7 1025 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 UTP14AQ9BVJ6 771 aaKnown RBP10.28□□□□□ -0.76
NFIX-211ENST00000588680 PCGF6Q9BYE7 350 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 HPS5Q9UPZ3 1129 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 HTTP42858 3142 aa10.28□□□□□ -0.76
NFIX-211ENST00000588680 MKI67P46013 3256 aaKnown RBP10.27□□□□□ -0.76
NFIX-211ENST00000588680 EIF4A1P60842 406 aaKnown RBP10.27□□□□□ -0.77
NFIX-211ENST00000588680 SP8Q8IXZ3 490 aa10.27□□□□□ -0.77
NFIX-211ENST00000588680 NUDCQ9Y266 331 aa10.27□□□□□ -0.77
NFIX-211ENST00000588680 RBBP6Q7Z6E9 1792 aaKnown RBP10.26□□□□□ -0.77
NFIX-211ENST00000588680 BBOX1O75936 387 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
NFIX-211ENST00000588680 GRAPQ13588 217 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 SLC10A5Q5PT55 438 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 RASAL3Q86YV0 1011 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 GRAPLQ8TC17 118 aaPredicted RBP10.26□□□□□ -0.77
NFIX-211ENST00000588680 CSRNP1Q96S65 589 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
NFIX-211ENST00000588680 DBNDD1Q9H9R9 158 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 GGA3Q9NZ52 723 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 RTL9Q8NET4 1388 aa10.26□□□□□ -0.77
NFIX-211ENST00000588680 KIF4BQ2VIQ3 1234 aa10.25□□□□□ -0.77
NFIX-211ENST00000588680 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
NFIX-211ENST00000588680 DDX46Q7L014 1031 aaKnown RBP10.25□□□□□ -0.77
NFIX-211ENST00000588680 LRP10Q7Z4F1 713 aa10.25□□□□□ -0.77
NFIX-211ENST00000588680 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
NFIX-211ENST00000588680 DPF2Q92785 391 aa10.25□□□□□ -0.77
NFIX-211ENST00000588680 DCPSQ96C86 337 aaKnown RBP10.25□□□□□ -0.77
NFIX-211ENST00000588680 CDCA5Q96FF9 252 aa10.25□□□□□ -0.77
NFIX-211ENST00000588680 ASTN2O75129 1339 aaPredicted RBP10.25□□□□□ -0.77
NFIX-211ENST00000588680 ZNF646O15015 1829 aaPredicted RBP10.24□□□□□ -0.77
NFIX-211ENST00000588680 ECE2O60344 883 aa10.24□□□□□ -0.77
NFIX-211ENST00000588680 PROSER3Q2NL68 480 aa10.24□□□□□ -0.77
NFIX-211ENST00000588680 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
NFIX-211ENST00000588680 SPEF2Q9C093 1822 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 CENPFP49454 3210 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 RIMBP2O15034 1052 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 ANXA1P04083 346 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 RPS12P25398 132 aaKnown RBP10.23□□□□□ -0.77
NFIX-211ENST00000588680 PDIA6Q15084 440 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 WASHC4Q2M389 1173 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 TMC4Q7Z404 712 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 NLRP10Q86W26 655 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 KCNQ5Q9NR82 932 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 HDAC9Q9UKV0 1011 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 SH3TC1Q8TE82 1336 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 CUL9Q8IWT3 2517 aa10.23□□□□□ -0.77
NFIX-211ENST00000588680 LAMB1P07942 1786 aa10.22□□□□□ -0.77
NFIX-211ENST00000588680 PPP2R1AP30153 589 aa10.22□□□□□ -0.77
NFIX-211ENST00000588680 PKN2Q16513 984 aaKnown RBP10.22□□□□□ -0.77
NFIX-211ENST00000588680 ZNF296Q8WUU4 475 aaPredicted RBP10.22□□□□□ -0.77
NFIX-211ENST00000588680 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
NFIX-211ENST00000588680 TRMT112Q9UI30 125 aaKnown RBP10.22□□□□□ -0.77
NFIX-211ENST00000588680 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms