RNA–Protein interactions for RNA: ENST00000588242.2

GCDH-207, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-207ENST00000588242 USP44Q9H0E7 712 aa15.94■□□□□ 0.14
GCDH-207ENST00000588242 LAMB2P55268 1798 aa15.94■□□□□ 0.14
GCDH-207ENST00000588242 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
GCDH-207ENST00000588242 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
GCDH-207ENST00000588242 UTYO14607 1347 aa15.94■□□□□ 0.14
GCDH-207ENST00000588242 NBPF7P0C2Y1 421 aaPredicted RBP15.93■□□□□ 0.14
GCDH-207ENST00000588242 SRGNP10124 158 aa15.93■□□□□ 0.14
GCDH-207ENST00000588242 CRY2Q49AN0 593 aa15.93■□□□□ 0.14
GCDH-207ENST00000588242 C3orf67Q6ZVT6 689 aa15.93■□□□□ 0.14
GCDH-207ENST00000588242 RPGRQ92834 1020 aaKnown RBP15.93■□□□□ 0.14
GCDH-207ENST00000588242 COL11A2P13942 1736 aaPredicted RBP15.92■□□□□ 0.14
GCDH-207ENST00000588242 NPR1P16066 1061 aa15.92■□□□□ 0.14
GCDH-207ENST00000588242 KCNA3P22001 575 aa15.92■□□□□ 0.14
GCDH-207ENST00000588242 ZNF622Q969S3 477 aaKnown RBP eCLIP15.92■□□□□ 0.14
GCDH-207ENST00000588242 MASTLQ96GX5 879 aa15.92■□□□□ 0.14
GCDH-207ENST00000588242 UBTFL1P0CB47 393 aaPredicted RBP15.91■□□□□ 0.14
GCDH-207ENST00000588242 CTSWP56202 376 aa15.91■□□□□ 0.14
GCDH-207ENST00000588242 SF3B3Q15393 1217 aaKnown RBP15.91■□□□□ 0.14
GCDH-207ENST00000588242 STYK1Q6J9G0 422 aa15.91■□□□□ 0.14
GCDH-207ENST00000588242 MEIS3Q99687 375 aa15.91■□□□□ 0.14
GCDH-207ENST00000588242 PLA2G12BQ9BX93 195 aa15.91■□□□□ 0.14
GCDH-207ENST00000588242 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
GCDH-207ENST00000588242 GNAI3P08754 354 aa15.9■□□□□ 0.14
GCDH-207ENST00000588242 PDE4AP27815 886 aa15.9■□□□□ 0.14
GCDH-207ENST00000588242 RGS3P49796 1198 aa15.9■□□□□ 0.14
GCDH-207ENST00000588242 CCDC152Q4G0S7 254 aa15.9■□□□□ 0.14
GCDH-207ENST00000588242 RBM17Q96I25 401 aaKnown RBP15.9■□□□□ 0.14
GCDH-207ENST00000588242 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
GCDH-207ENST00000588242 HDAC5Q9UQL6 1122 aa15.9■□□□□ 0.14
GCDH-207ENST00000588242 DLEC1Q9Y238 1755 aa15.9■□□□□ 0.14
GCDH-207ENST00000588242 HOXA10P31260 410 aaPredicted RBP15.89■□□□□ 0.13
GCDH-207ENST00000588242 FOXO4P98177 505 aa15.89■□□□□ 0.13
GCDH-207ENST00000588242 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
GCDH-207ENST00000588242 SMC5Q8IY18 1101 aa15.89■□□□□ 0.13
GCDH-207ENST00000588242 CNKSR1Q969H4 720 aa15.89■□□□□ 0.13
GCDH-207ENST00000588242 CCDC85AQ96PX6 553 aaPredicted RBP15.89■□□□□ 0.13
GCDH-207ENST00000588242 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
GCDH-207ENST00000588242 ALDH1B1P30837 517 aa15.88■□□□□ 0.13
GCDH-207ENST00000588242 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
GCDH-207ENST00000588242 SKAP1Q86WV1 359 aa15.88■□□□□ 0.13
GCDH-207ENST00000588242 TTLL6Q8N841 843 aa15.88■□□□□ 0.13
GCDH-207ENST00000588242 TTLL11Q8NHH1 800 aa15.88■□□□□ 0.13
GCDH-207ENST00000588242 CRAMP1Q96RY5 1269 aa15.88■□□□□ 0.13
GCDH-207ENST00000588242 BACH2Q9BYV9 841 aa15.88■□□□□ 0.13
GCDH-207ENST00000588242 CSF1RP07333 972 aa15.87■□□□□ 0.13
GCDH-207ENST00000588242 DALRD3Q5D0E6 543 aaKnown RBP15.87■□□□□ 0.13
GCDH-207ENST00000588242 LMBR1LQ6UX01 489 aa15.87■□□□□ 0.13
GCDH-207ENST00000588242 GCC1Q96CN9 775 aa15.87■□□□□ 0.13
GCDH-207ENST00000588242 KAZALD1Q96I82 304 aa15.87■□□□□ 0.13
GCDH-207ENST00000588242 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
GCDH-207ENST00000588242 BCS1LQ9Y276 419 aa15.87■□□□□ 0.13
GCDH-207ENST00000588242 CHMP3Q9Y3E7 222 aa15.87■□□□□ 0.13
GCDH-207ENST00000588242 LRRFIP2Q9Y608 721 aaKnown RBP15.87■□□□□ 0.13
GCDH-207ENST00000588242 MYH3P11055 1940 aa15.86■□□□□ 0.13
GCDH-207ENST00000588242 GNAI2P04899 355 aa15.86■□□□□ 0.13
GCDH-207ENST00000588242 FAM161AQ3B820 660 aa15.86■□□□□ 0.13
GCDH-207ENST00000588242 PRPF40BQ6NWY9 871 aaKnown RBP15.86■□□□□ 0.13
GCDH-207ENST00000588242 GREM2Q9H772 168 aa15.86■□□□□ 0.13
GCDH-207ENST00000588242 RTL9Q8NET4 1388 aa15.86■□□□□ 0.13
GCDH-207ENST00000588242 BRCA1P38398 1863 aaKnown RBP15.85■□□□□ 0.13
GCDH-207ENST00000588242 GRAPQ13588 217 aa15.85■□□□□ 0.13
GCDH-207ENST00000588242 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
GCDH-207ENST00000588242 RPAP2Q8IXW5 612 aaPredicted RBP15.85■□□□□ 0.13
GCDH-207ENST00000588242 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
GCDH-207ENST00000588242 C1orf115Q9H7X2 142 aa15.85■□□□□ 0.13
GCDH-207ENST00000588242 SEC31BQ9NQW1 1179 aa15.85■□□□□ 0.13
GCDH-207ENST00000588242 PPEF1O14829 653 aaPredicted RBP15.84■□□□□ 0.13
GCDH-207ENST00000588242 ITGA6P23229 1130 aa15.84■□□□□ 0.13
GCDH-207ENST00000588242 ANKRD44Q8N8A2 993 aa15.84■□□□□ 0.13
GCDH-207ENST00000588242 CDC5LQ99459 802 aaKnown RBP15.84■□□□□ 0.13
GCDH-207ENST00000588242 ANKRD18BA2A2Z9 1011 aa15.83■□□□□ 0.12
GCDH-207ENST00000588242 BBOX1O75936 387 aa15.83■□□□□ 0.12
GCDH-207ENST00000588242 NUCB1Q02818 461 aa15.83■□□□□ 0.12
GCDH-207ENST00000588242 IFIT5Q13325 482 aaKnown RBP15.83■□□□□ 0.12
GCDH-207ENST00000588242 GPR162Q16538 588 aa15.83■□□□□ 0.12
GCDH-207ENST00000588242 CCDC57Q2TAC2 916 aa15.83■□□□□ 0.12
GCDH-207ENST00000588242 CELF1Q92879 486 aaKnown RBP15.83■□□□□ 0.12
GCDH-207ENST00000588242 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
GCDH-207ENST00000588242 CACNA1SQ13698 1873 aa15.82■□□□□ 0.12
GCDH-207ENST00000588242 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
GCDH-207ENST00000588242 HMMRO75330 724 aa15.82■□□□□ 0.12
GCDH-207ENST00000588242 YBX3P16989 372 aaKnown RBP eCLIP15.82■□□□□ 0.12
GCDH-207ENST00000588242 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
GCDH-207ENST00000588242 ANKRD18AQ8IVF6 992 aa15.82■□□□□ 0.12
GCDH-207ENST00000588242 C21orf2O43822 256 aa15.81■□□□□ 0.12
GCDH-207ENST00000588242 IGHMBP2P38935 993 aaKnown RBP15.81■□□□□ 0.12
GCDH-207ENST00000588242 TAF7LQ5H9L4 462 aa15.81■□□□□ 0.12
GCDH-207ENST00000588242 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
GCDH-207ENST00000588242 SLX4Q8IY92 1834 aa15.81■□□□□ 0.12
GCDH-207ENST00000588242 TMX4Q9H1E5 349 aaPredicted RBP15.81■□□□□ 0.12
GCDH-207ENST00000588242 COL4A1P02462 1669 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 ANP32AP39687 249 aaKnown RBP15.8■□□□□ 0.12
GCDH-207ENST00000588242 SOGA3Q5TF21 947 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 CEP85Q6P2H3 762 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 CHD1LQ86WJ1 897 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 ATP6V0A2Q9Y487 856 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 TAF1P21675 1872 aa15.8■□□□□ 0.12
GCDH-207ENST00000588242 MTX1Q13505 466 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms