RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 SPON1Q9HCB6 807 aa17.6■□□□□ 0.41
CCDC130-208ENST00000588071 PNMA6EA0A0J9YXQ4 647 aa17.59■□□□□ 0.41
CCDC130-208ENST00000588071 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
CCDC130-208ENST00000588071 CCDC57Q2TAC2 916 aa17.59■□□□□ 0.41
CCDC130-208ENST00000588071 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
CCDC130-208ENST00000588071 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.4
CCDC130-208ENST00000588071 IFIT5Q13325 482 aaKnown RBP17.58■□□□□ 0.4
CCDC130-208ENST00000588071 MTX1Q13505 466 aa17.58■□□□□ 0.4
CCDC130-208ENST00000588071 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
CCDC130-208ENST00000588071 GREM2Q9H772 168 aa17.58■□□□□ 0.4
CCDC130-208ENST00000588071 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.4
CCDC130-208ENST00000588071 ITGA6P23229 1130 aa17.57■□□□□ 0.4
CCDC130-208ENST00000588071 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
CCDC130-208ENST00000588071 TAF7LQ5H9L4 462 aa17.57■□□□□ 0.4
CCDC130-208ENST00000588071 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
CCDC130-208ENST00000588071 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
CCDC130-208ENST00000588071 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
CCDC130-208ENST00000588071 RPGRQ92834 1020 aaKnown RBP17.57■□□□□ 0.4
CCDC130-208ENST00000588071 PTGER2P43116 358 aa17.56■□□□□ 0.4
CCDC130-208ENST00000588071 HDAC1Q13547 482 aaPredicted RBP17.56■□□□□ 0.4
CCDC130-208ENST00000588071 POLA2Q14181 598 aa17.56■□□□□ 0.4
CCDC130-208ENST00000588071 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
CCDC130-208ENST00000588071 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
CCDC130-208ENST00000588071 TAF1P21675 1872 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 H0YIN7 160 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 IGHDP01880 384 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 C2CD5Q86YS7 1000 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 SGIP1Q9BQI5 828 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 PPP1R1BQ9UD71 204 aaPredicted RBP17.55■□□□□ 0.4
CCDC130-208ENST00000588071 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
CCDC130-208ENST00000588071 KLRG2A4D1S0 409 aaPredicted RBP17.54■□□□□ 0.4
CCDC130-208ENST00000588071 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
CCDC130-208ENST00000588071 KLHL34Q8N239 644 aa17.54■□□□□ 0.4
CCDC130-208ENST00000588071 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
CCDC130-208ENST00000588071 CDC5LQ99459 802 aaKnown RBP17.54■□□□□ 0.4
CCDC130-208ENST00000588071 SEC31BQ9NQW1 1179 aa17.54■□□□□ 0.4
CCDC130-208ENST00000588071 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
CCDC130-208ENST00000588071 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
CCDC130-208ENST00000588071 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC130-208ENST00000588071 CRY2Q49AN0 593 aa17.53■□□□□ 0.4
CCDC130-208ENST00000588071 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
CCDC130-208ENST00000588071 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.43e-7■□□□□ 8.4
CCDC130-208ENST00000588071 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
CCDC130-208ENST00000588071 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
CCDC130-208ENST00000588071 NPR1P16066 1061 aa17.52■□□□□ 0.4
CCDC130-208ENST00000588071 PTPN12Q05209 780 aaKnown RBP17.52■□□□□ 0.4
CCDC130-208ENST00000588071 OS9Q13438 667 aaPredicted RBP17.52■□□□□ 0.4
CCDC130-208ENST00000588071 ANKRD18AQ8IVF6 992 aa17.52■□□□□ 0.4
CCDC130-208ENST00000588071 MASTLQ96GX5 879 aa17.52■□□□□ 0.4
CCDC130-208ENST00000588071 MPHOSPH8Q99549 860 aa17.52■□□□□ 0.4
CCDC130-208ENST00000588071 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
CCDC130-208ENST00000588071 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
CCDC130-208ENST00000588071 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 KIF13BQ9NQT8 1826 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 SRGNP10124 158 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 ALDH1B1P30837 517 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
CCDC130-208ENST00000588071 RPS8P62241 208 aaKnown RBP17.51■□□□□ 0.39
CCDC130-208ENST00000588071 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 SIL1Q9H173 461 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 CD2APQ9Y5K6 639 aa17.51■□□□□ 0.39
CCDC130-208ENST00000588071 CHRNA5P30532 468 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 TGFB2P61812 414 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 GRAPQ13588 217 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
CCDC130-208ENST00000588071 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
CCDC130-208ENST00000588071 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 CRAMP1Q96RY5 1269 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 CNNM1Q9NRU3 951 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 EXOC6BQ9Y2D4 811 aa17.5■□□□□ 0.39
CCDC130-208ENST00000588071 APBB1O00213 710 aa17.49■□□□□ 0.39
CCDC130-208ENST00000588071 BBOX1O75936 387 aa17.49■□□□□ 0.39
CCDC130-208ENST00000588071 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
CCDC130-208ENST00000588071 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
CCDC130-208ENST00000588071 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
CCDC130-208ENST00000588071 NOP58Q9Y2X3 529 aaKnown RBP17.49■□□□□ 0.39
CCDC130-208ENST00000588071 CACNA1SQ13698 1873 aa17.49■□□□□ 0.39
CCDC130-208ENST00000588071 A0A0G2JLW4 131 aa17.48■□□□□ 0.39
CCDC130-208ENST00000588071 EYA2O00167 538 aa17.48■□□□□ 0.39
CCDC130-208ENST00000588071 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
CCDC130-208ENST00000588071 DPEP1P16444 411 aa17.48■□□□□ 0.39
CCDC130-208ENST00000588071 CENPQQ7L2Z9 268 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-208ENST00000588071 PUS3Q9BZE2 481 aaKnown RBP17.48■□□□□ 0.39
CCDC130-208ENST00000588071 FBXO3Q9UK99 471 aa17.48■□□□□ 0.39
CCDC130-208ENST00000588071 COL11A2P13942 1736 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-208ENST00000588071 IL15P40933 162 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-208ENST00000588071 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
CCDC130-208ENST00000588071 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
CCDC130-208ENST00000588071 BSDC1Q9NW68 430 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-208ENST00000588071 CIAO1O76071 339 aa17.46■□□□□ 0.39
CCDC130-208ENST00000588071 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
CCDC130-208ENST00000588071 SMC5Q8IY18 1101 aa17.46■□□□□ 0.39
CCDC130-208ENST00000588071 BCL11AQ9H165 835 aa17.46■□□□□ 0.39
CCDC130-208ENST00000588071 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-208ENST00000588071 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
CCDC130-208ENST00000588071 CEP126Q9P2H0 1117 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms