RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 A0A1B0GTH6 734 aa8.42□□□□□ -1.06
TUBD1-208ENST00000588009 A0A1W2PNR3 127 aa8.42□□□□□ -1.06
TUBD1-208ENST00000588009 PHACTR2O75167 634 aa8.42□□□□□ -1.06
TUBD1-208ENST00000588009 GRNP28799 593 aaKnown RBP8.42□□□□□ -1.06
TUBD1-208ENST00000588009 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
TUBD1-208ENST00000588009 TMEM63CQ9P1W3 806 aa8.42□□□□□ -1.06
TUBD1-208ENST00000588009 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
TUBD1-208ENST00000588009 RHOQP17081 205 aa8.41□□□□□ -1.06
TUBD1-208ENST00000588009 TNNI2P48788 182 aa8.41□□□□□ -1.06
TUBD1-208ENST00000588009 PTPN12Q05209 780 aaKnown RBP8.41□□□□□ -1.06
TUBD1-208ENST00000588009 NFX1Q12986 1120 aaKnown RBP8.41□□□□□ -1.06
TUBD1-208ENST00000588009 C6orf118Q5T5N4 469 aa8.41□□□□□ -1.06
TUBD1-208ENST00000588009 DDX41Q9UJV9 622 aaKnown RBP8.41□□□□□ -1.06
TUBD1-208ENST00000588009 TERTO14746 1132 aaKnown RBP8.4□□□□□ -1.06
TUBD1-208ENST00000588009 WIPF1O43516 503 aa8.4□□□□□ -1.06
TUBD1-208ENST00000588009 EPB42P16452 691 aa8.4□□□□□ -1.06
TUBD1-208ENST00000588009 TYRO3Q06418 890 aa8.4□□□□□ -1.06
TUBD1-208ENST00000588009 MRPL14Q6P1L8 145 aaKnown RBP8.4□□□□□ -1.06
TUBD1-208ENST00000588009 ZNF654Q8IZM8 581 aa8.4□□□□□ -1.06
TUBD1-208ENST00000588009 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
TUBD1-208ENST00000588009 CEP63Q96MT8 703 aa8.4□□□□□ -1.06
TUBD1-208ENST00000588009 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
TUBD1-208ENST00000588009 XYLBO75191 536 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 EGFRP00533 1210 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
TUBD1-208ENST00000588009 SNRPBP14678 240 aaKnown RBP8.39□□□□□ -1.07
TUBD1-208ENST00000588009 RACK1P63244 317 aaKnown RBP8.39□□□□□ -1.07
TUBD1-208ENST00000588009 GNL2Q13823 731 aaKnown RBP8.39□□□□□ -1.07
TUBD1-208ENST00000588009 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
TUBD1-208ENST00000588009 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 HS2ST1Q7LGA3 356 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 GALNT12Q8IXK2 581 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 CHRDQ9H2X0 955 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 CNTN3Q9P232 1028 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 FAM8A1Q9UBU6 413 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 STK17AQ9UEE5 414 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
TUBD1-208ENST00000588009 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 EREGO14944 169 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 MEI1Q5TIA1 1274 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 NXPE4Q6UWF7 544 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 FAM177A1Q8N128 213 aaPredicted RBP8.38□□□□□ -1.07
TUBD1-208ENST00000588009 C1orf127Q8N9H9 656 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 BCO2Q9BYV7 579 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 SRCIN1Q9C0H9 1055 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 CRISPLD1Q9H336 500 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 SRA1Q9HD15 236 aaKnown RBP8.38□□□□□ -1.07
TUBD1-208ENST00000588009 C11orf16Q9NQ32 467 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 ABI2Q9NYB9 513 aaPredicted RBP8.38□□□□□ -1.07
TUBD1-208ENST00000588009 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 PCDHGB7Q9Y5F8 929 aa8.38□□□□□ -1.07
TUBD1-208ENST00000588009 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 GADD45BO75293 160 aaPredicted RBP8.37□□□□□ -1.07
TUBD1-208ENST00000588009 USP17L7P0C7H9 530 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 ATP2B1P20020 1258 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 ST13P50502 369 aaKnown RBP8.37□□□□□ -1.07
TUBD1-208ENST00000588009 NLRP13Q86W25 1043 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 NPAS3Q8IXF0 933 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 PMEPA1Q969W9 287 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 GMLQ99445 158 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 INPP5FQ9Y2H2 1132 aa8.37□□□□□ -1.07
TUBD1-208ENST00000588009 NLRP8Q86W28 1048 aa8.36□□□□□ -1.07
TUBD1-208ENST00000588009 SUV39H2Q9H5I1 410 aa8.36□□□□□ -1.07
TUBD1-208ENST00000588009 RUBCNLQ9H714 662 aa8.36□□□□□ -1.07
TUBD1-208ENST00000588009 GPAMQ9HCL2 828 aa8.36□□□□□ -1.07
TUBD1-208ENST00000588009 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
TUBD1-208ENST00000588009 SCARF1Q14162 830 aa8.35□□□□□ -1.07
TUBD1-208ENST00000588009 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
TUBD1-208ENST00000588009 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
TUBD1-208ENST00000588009 ZCCHC2Q9C0B9 1178 aaKnown RBP8.35□□□□□ -1.07
TUBD1-208ENST00000588009 BRD7Q9NPI1 651 aa8.35□□□□□ -1.07
TUBD1-208ENST00000588009 DYRK1BQ9Y463 629 aa8.35□□□□□ -1.07
TUBD1-208ENST00000588009 F11P03951 625 aa8.34□□□□□ -1.07
TUBD1-208ENST00000588009 CES1P23141 567 aa8.34□□□□□ -1.07
TUBD1-208ENST00000588009 DNAJA1P31689 397 aaKnown RBP8.34□□□□□ -1.07
TUBD1-208ENST00000588009 ARID5AQ03989 594 aa8.34□□□□□ -1.07
TUBD1-208ENST00000588009 PGBD3Q8N328 593 aa8.34□□□□□ -1.07
TUBD1-208ENST00000588009 DHX38Q92620 1227 aaKnown RBP8.34□□□□□ -1.07
TUBD1-208ENST00000588009 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
TUBD1-208ENST00000588009 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
TUBD1-208ENST00000588009 KCNQ4P56696 695 aa8.33□□□□□ -1.08
TUBD1-208ENST00000588009 GRM2Q14416 872 aa8.33□□□□□ -1.08
TUBD1-208ENST00000588009 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
TUBD1-208ENST00000588009 DPH6Q7L8W6 267 aa8.33□□□□□ -1.08
TUBD1-208ENST00000588009 ARMC5Q96C12 935 aa8.33□□□□□ -1.08
TUBD1-208ENST00000588009 GSTT1P30711 240 aa8.32□□□□□ -1.08
TUBD1-208ENST00000588009 GTF2F1P35269 517 aaKnown RBP eCLIP8.32□□□□□ -1.08
TUBD1-208ENST00000588009 VEGFBP49765 207 aa8.32□□□□□ -1.08
TUBD1-208ENST00000588009 ERMP1Q7Z2K6 904 aa8.32□□□□□ -1.08
TUBD1-208ENST00000588009 VPS37DQ86XT2 251 aa8.32□□□□□ -1.08
TUBD1-208ENST00000588009 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
TUBD1-208ENST00000588009 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
TUBD1-208ENST00000588009 PPP4R2Q9NY27 417 aa8.32□□□□□ -1.08
TUBD1-208ENST00000588009 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
TUBD1-208ENST00000588009 A0A1W2PP55 124 aa8.31□□□□□ -1.08
TUBD1-208ENST00000588009 SMARCA5O60264 1052 aaPredicted RBP8.31□□□□□ -1.08
TUBD1-208ENST00000588009 SASH3O75995 380 aa8.31□□□□□ -1.08
TUBD1-208ENST00000588009 CYP2E1P05181 493 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms