RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 IL16Q14005 1332 aa10.9□□□□□ -0.66
NEDD4L-218ENST00000587547 LTBP3Q9NS15 1303 aa10.9□□□□□ -0.66
NEDD4L-218ENST00000587547 DNAJC10Q8IXB1 793 aa10.9□□□□□ -0.66
NEDD4L-218ENST00000587547 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
NEDD4L-218ENST00000587547 NARFQ9UHQ1 456 aa10.9□□□□□ -0.66
NEDD4L-218ENST00000587547 ABT1Q9ULW3 272 aaKnown RBP10.9□□□□□ -0.66
NEDD4L-218ENST00000587547 COL15A1P39059 1388 aa10.9□□□□□ -0.67
NEDD4L-218ENST00000587547 COL11A2P13942 1736 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 ZNF541Q9H0D2 1346 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 E9PSI1 815 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 KCNQ3O43525 872 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 DSG2Q14126 1118 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 TTC5Q8N0Z6 440 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 MYH16Q9H6N6 1097 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 LTBP1Q14766 1721 aa10.89□□□□□ -0.67
NEDD4L-218ENST00000587547 SCN4AP35499 1836 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 CHL1O00533 1208 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 ZNF853P0CG23 659 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 FMR1Q06787 632 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 GRM1Q13255 1194 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 BICDL1Q6ZP65 573 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 CNTROBQ8N137 903 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 ANKRD31Q8N7Z5 1873 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 CAPNS2Q96L46 248 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 ZBTB1Q9Y2K1 713 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
NEDD4L-218ENST00000587547 EPHX2P34913 555 aa10.87□□□□□ -0.67
NEDD4L-218ENST00000587547 ZNF790Q6PG37 636 aa10.87□□□□□ -0.67
NEDD4L-218ENST00000587547 BEGAINQ9BUH8 593 aa10.87□□□□□ -0.67
NEDD4L-218ENST00000587547 OCEL1Q9H607 264 aa10.87□□□□□ -0.67
NEDD4L-218ENST00000587547 BABAM1Q9NWV8 329 aa10.87□□□□□ -0.67
NEDD4L-218ENST00000587547 HACL1Q9UJ83 578 aa10.87□□□□□ -0.67
NEDD4L-218ENST00000587547 RNF123Q5XPI4 1314 aa10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 CYP19A1P11511 503 aaPredicted RBP10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 EXOSC9Q06265 439 aaKnown RBP10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 KRT24Q2M2I5 525 aa10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 IER5LQ5T953 404 aa10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 GPR101Q96P66 508 aaPredicted RBP10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 DDX21Q9NR30 783 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 SLX4Q8IY92 1834 aa10.86□□□□□ -0.67
NEDD4L-218ENST00000587547 ELL2O00472 640 aaPredicted RBP10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 AOC2O75106 756 aa10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 EIF4A1P60842 406 aaKnown RBP10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 FOXK1P85037 733 aa10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 DUSP27Q5VZP5 1158 aa10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 PRR5LQ6MZQ0 368 aa10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 PRPF40BQ6NWY9 871 aaKnown RBP10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 FMNL2Q96PY5 1086 aa10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
NEDD4L-218ENST00000587547 DPYSL4O14531 572 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 PDE6BP35913 854 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 ECE1P42892 770 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 DGKZQ13574 1117 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 TBC1D9BQ66K14 1250 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 C8orf58Q8NAV2 365 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
NEDD4L-218ENST00000587547 HEG1Q9ULI3 1381 aa10.83□□□□□ -0.68
NEDD4L-218ENST00000587547 SOX10P56693 466 aa10.83□□□□□ -0.68
NEDD4L-218ENST00000587547 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
NEDD4L-218ENST00000587547 PNMA8AQ86V59 439 aaPredicted RBP10.83□□□□□ -0.68
NEDD4L-218ENST00000587547 TSPYL6Q8N831 410 aa10.83□□□□□ -0.68
NEDD4L-218ENST00000587547 ZNF277Q9NRM2 450 aaPredicted RBP10.83□□□□□ -0.68
NEDD4L-218ENST00000587547 CASP8AP2Q9UKL3 1982 aa10.83□□□□□ -0.68
NEDD4L-218ENST00000587547 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 TRAF5O00463 557 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 ZMYND10O75800 440 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 EIF2S2P20042 333 aaKnown RBP10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 TWISTNBQ3B726 338 aaPredicted RBP10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 CST9Q5W186 159 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 C7orf43Q8WVR3 580 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 NECTIN2Q92692 538 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 CNKSR1Q969H4 720 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 PDZRN3Q9UPQ7 1066 aa10.82□□□□□ -0.68
NEDD4L-218ENST00000587547 CACNA1SQ13698 1873 aa10.81□□□□□ -0.68
NEDD4L-218ENST00000587547 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
NEDD4L-218ENST00000587547 G3V3G9 751 aa10.81□□□□□ -0.68
NEDD4L-218ENST00000587547 SRGNP10124 158 aa10.81□□□□□ -0.68
NEDD4L-218ENST00000587547 CANXP27824 592 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-218ENST00000587547 SOGA3Q5TF21 947 aa10.81□□□□□ -0.68
NEDD4L-218ENST00000587547 STYK1Q6J9G0 422 aa10.81□□□□□ -0.68
NEDD4L-218ENST00000587547 TCERG1O14776 1098 aaKnown RBP10.8□□□□□ -0.68
NEDD4L-218ENST00000587547 PLCG2P16885 1265 aa10.8□□□□□ -0.68
NEDD4L-218ENST00000587547 MAP2K2P36507 400 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms