RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SAP130Q9H0E3 1048 aa8.56□□□□□ -1.04
VMP1-205ENST00000587470 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
VMP1-205ENST00000587470 LILRB5O75023 590 aa8.55□□□□□ -1.04
VMP1-205ENST00000587470 TARSP26639 723 aaKnown RBP8.55□□□□□ -1.04
VMP1-205ENST00000587470 DOC2BQ14184 412 aa8.55□□□□□ -1.04
VMP1-205ENST00000587470 C8orf86Q6ZUL3 223 aa8.55□□□□□ -1.04
VMP1-205ENST00000587470 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
VMP1-205ENST00000587470 MKNK1Q9BUB5 465 aa8.55□□□□□ -1.04
VMP1-205ENST00000587470 ZFATQ9P243 1243 aa8.55□□□□□ -1.04
VMP1-205ENST00000587470 SASH3O75995 380 aa8.54□□□□□ -1.04
VMP1-205ENST00000587470 EGFRP00533 1210 aa8.54□□□□□ -1.04
VMP1-205ENST00000587470 NID1P14543 1247 aa8.54□□□□□ -1.04
VMP1-205ENST00000587470 RSPO4Q2I0M5 234 aaPredicted RBP8.54□□□□□ -1.04
VMP1-205ENST00000587470 PRRT3Q5FWE3 981 aa8.54□□□□□ -1.04
VMP1-205ENST00000587470 CAPN12Q6ZSI9 719 aa8.54□□□□□ -1.04
VMP1-205ENST00000587470 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
VMP1-205ENST00000587470 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
VMP1-205ENST00000587470 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
VMP1-205ENST00000587470 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
VMP1-205ENST00000587470 RARAP10276 462 aa8.53□□□□□ -1.04
VMP1-205ENST00000587470 NAA30Q147X3 362 aaPredicted RBP8.53□□□□□ -1.04
VMP1-205ENST00000587470 NKAPLQ5M9Q1 402 aa8.53□□□□□ -1.04
VMP1-205ENST00000587470 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
VMP1-205ENST00000587470 ETFBKMTQ8IXQ9 262 aa8.53□□□□□ -1.04
VMP1-205ENST00000587470 XYLBO75191 536 aa8.52□□□□□ -1.05
VMP1-205ENST00000587470 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.05
VMP1-205ENST00000587470 FOXD4L6Q3SYB3 417 aaPredicted RBP8.52□□□□□ -1.05
VMP1-205ENST00000587470 PSAPL1Q6NUJ1 521 aa8.52□□□□□ -1.05
VMP1-205ENST00000587470 FOXD4L3Q6VB84 417 aaPredicted RBP8.52□□□□□ -1.05
VMP1-205ENST00000587470 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
VMP1-205ENST00000587470 TRPM4Q8TD43 1214 aa8.52□□□□□ -1.05
VMP1-205ENST00000587470 NUDT8Q8WV74 236 aa8.52□□□□□ -1.05
VMP1-205ENST00000587470 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.05
VMP1-205ENST00000587470 USP20Q9Y2K6 914 aa8.52□□□□□ -1.05
VMP1-205ENST00000587470 RGS9O75916 674 aaPredicted RBP8.51□□□□□ -1.05
VMP1-205ENST00000587470 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
VMP1-205ENST00000587470 ARID4AP29374 1257 aaPredicted RBP8.51□□□□□ -1.05
VMP1-205ENST00000587470 GATA4P43694 442 aa8.51□□□□□ -1.05
VMP1-205ENST00000587470 FAM35AQ86V20 835 aa8.51□□□□□ -1.05
VMP1-205ENST00000587470 SLAIN2Q9P270 581 aa8.51□□□□□ -1.05
VMP1-205ENST00000587470 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
VMP1-205ENST00000587470 ZBTB42B2RXF5 422 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 TNFRSF10BO14763 440 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 TRAPPC3LQ5T215 181 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 ILDR2Q71H61 639 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 SEMA6BQ9H3T3 888 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 C1orf115Q9H7X2 142 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 TLR7Q9NYK1 1049 aaKnown RBP8.5□□□□□ -1.05
VMP1-205ENST00000587470 NAGPAQ9UK23 515 aa8.5□□□□□ -1.05
VMP1-205ENST00000587470 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
VMP1-205ENST00000587470 AFF1P51825 1210 aaKnown RBP8.49□□□□□ -1.05
VMP1-205ENST00000587470 GPLD1P80108 840 aa8.49□□□□□ -1.05
VMP1-205ENST00000587470 FAM26DQ5JW98 314 aa8.49□□□□□ -1.05
VMP1-205ENST00000587470 TPSG1Q9NRR2 321 aa8.49□□□□□ -1.05
VMP1-205ENST00000587470 FRRS1LQ9P0K9 344 aa8.49□□□□□ -1.05
VMP1-205ENST00000587470 STIM2Q9P246 746 aa8.49□□□□□ -1.05
VMP1-205ENST00000587470 APBA3O96018 575 aa8.48□□□□□ -1.05
VMP1-205ENST00000587470 CPB1P15086 417 aa8.48□□□□□ -1.05
VMP1-205ENST00000587470 NRLP54845 237 aa8.48□□□□□ -1.05
VMP1-205ENST00000587470 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
VMP1-205ENST00000587470 PSAPP07602 524 aa8.47□□□□□ -1.05
VMP1-205ENST00000587470 ELMSAN1Q6PJG2 1045 aa8.47□□□□□ -1.05
VMP1-205ENST00000587470 LPIN3Q9BQK8 851 aa8.47□□□□□ -1.05
VMP1-205ENST00000587470 MMP20O60882 483 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 ZAP70P43403 619 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 MLLT1Q03111 559 aaPredicted RBP8.46□□□□□ -1.06
VMP1-205ENST00000587470 PLAURQ03405 335 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 PERM1Q5SV97 790 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 ABTB2Q8N961 1025 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 TTC9Q92623 222 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 NACC1Q96RE7 527 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 SEPT3Q9UH03 358 aa8.46□□□□□ -1.06
VMP1-205ENST00000587470 A0A0A0MRY4 1105 aa8.45□□□□□ -1.06
VMP1-205ENST00000587470 TMEM88BA6NKF7 163 aa8.45□□□□□ -1.06
VMP1-205ENST00000587470 RAC1P63000 192 aa8.45□□□□□ -1.06
VMP1-205ENST00000587470 FNDC3AQ9Y2H6 1198 aaKnown RBP8.45□□□□□ -1.06
VMP1-205ENST00000587470 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 UBAP1LF5GYI3 381 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 ZBTB39O15060 712 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 DYRK3O43781 588 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 SOX18P35713 384 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 SIK1P57059 783 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 TRIP4Q15650 581 aaPredicted RBP8.44□□□□□ -1.06
VMP1-205ENST00000587470 GRIK4Q16099 956 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 MSL1Q68DK7 614 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 HFE2Q6ZVN8 426 aa8.44□□□□□ -1.06
VMP1-205ENST00000587470 DMRTC2Q8IXT2 367 aaPredicted RBP8.44□□□□□ -1.06
VMP1-205ENST00000587470 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
VMP1-205ENST00000587470 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
VMP1-205ENST00000587470 ELNP15502 786 aa8.43□□□□□ -1.06
VMP1-205ENST00000587470 SSFA2P28290 1259 aa8.43□□□□□ -1.06
VMP1-205ENST00000587470 C9orf172C9J069 976 aa8.42□□□□□ -1.06
VMP1-205ENST00000587470 SELPP16109 830 aa8.42□□□□□ -1.06
VMP1-205ENST00000587470 EIF2AK2P19525 551 aaKnown RBP8.42□□□□□ -1.06
VMP1-205ENST00000587470 GRIK5Q16478 980 aa8.42□□□□□ -1.06
VMP1-205ENST00000587470 ERICH6Q7L0X2 663 aa8.42□□□□□ -1.06
VMP1-205ENST00000587470 GPR152Q8TDT2 470 aa8.42□□□□□ -1.06
VMP1-205ENST00000587470 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms