RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 DLK2Q6UY11 383 aa11.36□□□□□ -0.59
SDF2-204ENST00000587338 PPP1R42Q7Z4L9 355 aa11.36□□□□□ -0.59
SDF2-204ENST00000587338 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
SDF2-204ENST00000587338 NLRP3Q96P20 1036 aa11.36□□□□□ -0.59
SDF2-204ENST00000587338 RTFDC1Q9BY42 306 aaPredicted RBP11.36□□□□□ -0.59
SDF2-204ENST00000587338 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
SDF2-204ENST00000587338 RGMBQ6NW40 437 aa11.35□□□□□ -0.59
SDF2-204ENST00000587338 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
SDF2-204ENST00000587338 ZNF34Q8IZ26 560 aa11.35□□□□□ -0.59
SDF2-204ENST00000587338 MPNDQ8N594 471 aa11.35□□□□□ -0.59
SDF2-204ENST00000587338 CNOT7Q9UIV1 285 aaKnown RBP11.35□□□□□ -0.59
SDF2-204ENST00000587338 H7C1D1 291 aa11.34□□□□□ -0.59
SDF2-204ENST00000587338 HTATSF1O43719 755 aaKnown RBP11.34□□□□□ -0.59
SDF2-204ENST00000587338 PARP10Q53GL7 1025 aa11.34□□□□□ -0.59
SDF2-204ENST00000587338 PRPF38BQ5VTL8 546 aaKnown RBP11.34□□□□□ -0.59
SDF2-204ENST00000587338 GIGYF2Q6Y7W6 1299 aaKnown RBP11.34□□□□□ -0.59
SDF2-204ENST00000587338 SAGE1Q9NXZ1 904 aa11.34□□□□□ -0.59
SDF2-204ENST00000587338 YDJCA8MPS7 323 aa11.33□□□□□ -0.6
SDF2-204ENST00000587338 FAM155AB1AL88 458 aaPredicted RBP11.33□□□□□ -0.6
SDF2-204ENST00000587338 TRPA1O75762 1119 aa11.33□□□□□ -0.6
SDF2-204ENST00000587338 ZNF157P51786 506 aaPredicted RBP11.33□□□□□ -0.6
SDF2-204ENST00000587338 KIF23Q02241 960 aaPredicted RBP11.33□□□□□ -0.6
SDF2-204ENST00000587338 KRT26Q7Z3Y9 468 aa11.33□□□□□ -0.6
SDF2-204ENST00000587338 PNISRQ8TF01 805 aaKnown RBP11.33□□□□□ -0.6
SDF2-204ENST00000587338 UTP14AQ9BVJ6 771 aaKnown RBP11.33□□□□□ -0.6
SDF2-204ENST00000587338 GBA2Q9HCG7 927 aaPredicted RBP11.33□□□□□ -0.6
SDF2-204ENST00000587338 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
SDF2-204ENST00000587338 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
SDF2-204ENST00000587338 BBOX1O75936 387 aa11.32□□□□□ -0.6
SDF2-204ENST00000587338 EIF4A1P60842 406 aaKnown RBP11.32□□□□□ -0.6
SDF2-204ENST00000587338 TBC1D10BQ4KMP7 808 aaPredicted RBP11.32□□□□□ -0.6
SDF2-204ENST00000587338 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
SDF2-204ENST00000587338 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
SDF2-204ENST00000587338 C2orf69Q8N8R5 385 aa11.32□□□□□ -0.6
SDF2-204ENST00000587338 CCDC102AQ96A19 550 aa11.32□□□□□ -0.6
SDF2-204ENST00000587338 RNF186Q9NXI6 227 aa11.32□□□□□ -0.6
SDF2-204ENST00000587338 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
SDF2-204ENST00000587338 EGFRP00533 1210 aa11.31□□□□□ -0.6
SDF2-204ENST00000587338 HCLS1P14317 486 aaPredicted RBP11.31□□□□□ -0.6
SDF2-204ENST00000587338 DDX46Q7L014 1031 aaKnown RBP11.31□□□□□ -0.6
SDF2-204ENST00000587338 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
SDF2-204ENST00000587338 THUMPD2Q9BTF0 503 aaKnown RBP11.31□□□□□ -0.6
SDF2-204ENST00000587338 DUOX1Q9NRD9 1551 aa11.3□□□□□ -0.6
SDF2-204ENST00000587338 PSMD14O00487 310 aa11.3□□□□□ -0.6
SDF2-204ENST00000587338 SLC10A3P09131 477 aa11.3□□□□□ -0.6
SDF2-204ENST00000587338 GRAPQ13588 217 aa11.3□□□□□ -0.6
SDF2-204ENST00000587338 SLC10A5Q5PT55 438 aa11.3□□□□□ -0.6
SDF2-204ENST00000587338 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
SDF2-204ENST00000587338 GRAPLQ8TC17 118 aaPredicted RBP11.3□□□□□ -0.6
SDF2-204ENST00000587338 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
SDF2-204ENST00000587338 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
SDF2-204ENST00000587338 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
SDF2-204ENST00000587338 NEFMP07197 916 aa11.29□□□□□ -0.6
SDF2-204ENST00000587338 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
SDF2-204ENST00000587338 DPF2Q92785 391 aa11.29□□□□□ -0.6
SDF2-204ENST00000587338 LAMB2P55268 1798 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 ANXA1P04083 346 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 GGA3Q9NZ52 723 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
SDF2-204ENST00000587338 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.6
SDF2-204ENST00000587338 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
SDF2-204ENST00000587338 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
SDF2-204ENST00000587338 PROSER3Q2NL68 480 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 LRP10Q7Z4F1 713 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 NLRP10Q86W26 655 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 ZNF428Q96B54 188 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.61
SDF2-204ENST00000587338 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
SDF2-204ENST00000587338 SH3TC1Q8TE82 1336 aa11.27□□□□□ -0.61
SDF2-204ENST00000587338 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
SDF2-204ENST00000587338 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 MKI67P46013 3256 aaKnown RBP11.26□□□□□ -0.61
SDF2-204ENST00000587338 TAF1P21675 1872 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 ECE2O60344 883 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 AIMP1Q12904 312 aaKnown RBP11.26□□□□□ -0.61
SDF2-204ENST00000587338 PDIA6Q15084 440 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 HSP90AB3PQ58FF7 597 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 RASAL3Q86YV0 1011 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 TSPYL4Q9UJ04 414 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 HDAC9Q9UKV0 1011 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 DLG5Q8TDM6 1919 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
SDF2-204ENST00000587338 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
SDF2-204ENST00000587338 HTTP42858 3142 aa11.25□□□□□ -0.61
SDF2-204ENST00000587338 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
SDF2-204ENST00000587338 NFE2L2Q16236 605 aa11.25□□□□□ -0.61
SDF2-204ENST00000587338 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
SDF2-204ENST00000587338 GPSM2P81274 684 aa11.24□□□□□ -0.61
SDF2-204ENST00000587338 PKN2Q16513 984 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms