RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 SRCAPQ6ZRS2 3230 aa8.28□□□□□ -1.08
NPC1-206ENST00000587223 CCT4P50991 539 aaKnown RBP8.28□□□□□ -1.08
NPC1-206ENST00000587223 SF3B3Q15393 1217 aaKnown RBP8.28□□□□□ -1.08
NPC1-206ENST00000587223 PRPF40BQ6NWY9 871 aaKnown RBP8.28□□□□□ -1.08
NPC1-206ENST00000587223 RIC1Q4ADV7 1423 aa8.28□□□□□ -1.08
NPC1-206ENST00000587223 CDHR2Q9BYE9 1310 aa8.28□□□□□ -1.08
NPC1-206ENST00000587223 GRM8O00222 908 aa8.27□□□□□ -1.09
NPC1-206ENST00000587223 BBOX1O75936 387 aa8.27□□□□□ -1.09
NPC1-206ENST00000587223 CCDC152Q4G0S7 254 aa8.27□□□□□ -1.09
NPC1-206ENST00000587223 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
NPC1-206ENST00000587223 ZKSCAN2Q63HK3 967 aa8.27□□□□□ -1.09
NPC1-206ENST00000587223 CCDC85AQ96PX6 553 aaPredicted RBP8.27□□□□□ -1.09
NPC1-206ENST00000587223 KIAA1551Q9HCM1 1747 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 PPEF1O14829 653 aaPredicted RBP8.26□□□□□ -1.09
NPC1-206ENST00000587223 CASP7P55210 303 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 GRAPQ13588 217 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 CC2D2BQ6DHV5 1058 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 ATF7IPQ6VMQ6 1270 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 GRAPLQ8TC17 118 aaPredicted RBP8.26□□□□□ -1.09
NPC1-206ENST00000587223 C7orf43Q8WVR3 580 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 PLA2G12BQ9BX93 195 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 RCAN3Q9UKA8 241 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 ZBTB12Q9Y330 459 aaPredicted RBP8.26□□□□□ -1.09
NPC1-206ENST00000587223 ABCC4O15439 1325 aa8.26□□□□□ -1.09
NPC1-206ENST00000587223 SLX4Q8IY92 1834 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 NBPF7P0C2Y1 421 aaPredicted RBP8.25□□□□□ -1.09
NPC1-206ENST00000587223 CTSWP56202 376 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 RPS8P62241 208 aaKnown RBP8.25□□□□□ -1.09
NPC1-206ENST00000587223 CCDC93Q567U6 631 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 SP8Q8IXZ3 490 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 RTKN2Q8IZC4 609 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 TTLL11Q8NHH1 800 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 USP44Q9H0E7 712 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 CHMP3Q9Y3E7 222 aa8.25□□□□□ -1.09
NPC1-206ENST00000587223 BRCA1P38398 1863 aaKnown RBP8.25□□□□□ -1.09
NPC1-206ENST00000587223 CSF1RP07333 972 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 MS4A1P11836 297 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 TRIM27P14373 513 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 YY1P25490 414 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 GRIPAP1Q4V328 841 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 INTS3Q68E01 1043 aaKnown RBP8.24□□□□□ -1.09
NPC1-206ENST00000587223 LMBR1LQ6UX01 489 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 OLFM4Q6UX06 510 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 ANKRD18AQ8IVF6 992 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 FTSJ3Q8IY81 847 aaKnown RBP8.24□□□□□ -1.09
NPC1-206ENST00000587223 DZIP1LQ8IYY4 767 aaKnown RBP8.24□□□□□ -1.09
NPC1-206ENST00000587223 CELF1Q92879 486 aaKnown RBP8.24□□□□□ -1.09
NPC1-206ENST00000587223 CDC5LQ99459 802 aaKnown RBP8.24□□□□□ -1.09
NPC1-206ENST00000587223 GREM2Q9H772 168 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 ATP6V0A2Q9Y487 856 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 DLEC1Q9Y238 1755 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 UTYO14607 1347 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 ARFGEF1Q9Y6D6 1849 aa8.24□□□□□ -1.09
NPC1-206ENST00000587223 TNRC6CQ9HCJ0 1690 aaKnown RBP8.24□□□□□ -1.09
NPC1-206ENST00000587223 COL11A2P13942 1736 aaPredicted RBP8.23□□□□□ -1.09
NPC1-206ENST00000587223 ANKRD18BA2A2Z9 1011 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 NFKBIEO00221 500 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 UBTFL1P0CB47 393 aaPredicted RBP8.23□□□□□ -1.09
NPC1-206ENST00000587223 LMNB1P20700 586 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 ITGA6P23229 1130 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 FOXO4P98177 505 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 RASSF7Q02833 373 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 IFIT5Q13325 482 aaKnown RBP8.23□□□□□ -1.09
NPC1-206ENST00000587223 CCDC57Q2TAC2 916 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 EPHA10Q5JZY3 1008 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 MPNDQ8N594 471 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.23□□□□□ -1.09
NPC1-206ENST00000587223 SUCLG2Q96I99 432 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 TAOK3Q9H2K8 898 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 NSFL1CQ9UNZ2 370 aaKnown RBP8.23□□□□□ -1.09
NPC1-206ENST00000587223 TNNQ9UQP3 1299 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 CACNA1SQ13698 1873 aa8.23□□□□□ -1.09
NPC1-206ENST00000587223 DDX60Q8IY21 1712 aaKnown RBP8.23□□□□□ -1.09
NPC1-206ENST00000587223 GNAI3P08754 354 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 IGHMBP2P38935 993 aaKnown RBP8.22□□□□□ -1.09
NPC1-206ENST00000587223 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
NPC1-206ENST00000587223 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 TAF7LQ5H9L4 462 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 DPP8Q6V1X1 898 aaPredicted RBP8.22□□□□□ -1.09
NPC1-206ENST00000587223 IFNLR1Q8IU57 520 aaPredicted RBP8.22□□□□□ -1.09
NPC1-206ENST00000587223 TMEM57Q8N5G2 664 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 SUPT20HQ8NEM7 779 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 MPHOSPH8Q99549 860 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 RNF181Q9P0P0 153 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 CHD4Q14839 1912 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 LAMB2P55268 1798 aa8.22□□□□□ -1.09
NPC1-206ENST00000587223 TAF1P21675 1872 aa8.21□□□□□ -1.09
NPC1-206ENST00000587223 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
NPC1-206ENST00000587223 PLIN1O60240 522 aa8.21□□□□□ -1.1
NPC1-206ENST00000587223 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.1
NPC1-206ENST00000587223 KAZALD1Q96I82 304 aa8.21□□□□□ -1.1
NPC1-206ENST00000587223 PSMD1Q99460 953 aa8.21□□□□□ -1.1
NPC1-206ENST00000587223 MEIS3Q99687 375 aa8.21□□□□□ -1.1
NPC1-206ENST00000587223 BICC1Q9H694 974 aaKnown RBP8.21□□□□□ -1.1
NPC1-206ENST00000587223 ZNF277Q9NRM2 450 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms