RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 BBOX1O75936 387 aa18.63■□□□□ 0.57
CXXC1-208ENST00000587170 RGS19P49795 217 aa18.63■□□□□ 0.57
CXXC1-208ENST00000587170 PROSER3Q2NL68 480 aa18.63■□□□□ 0.57
CXXC1-208ENST00000587170 SP8Q8IXZ3 490 aa18.63■□□□□ 0.57
CXXC1-208ENST00000587170 ZC3H15Q8WU90 426 aaKnown RBP18.63■□□□□ 0.57
CXXC1-208ENST00000587170 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
CXXC1-208ENST00000587170 BRPF1P55201 1214 aaPredicted RBP18.62■□□□□ 0.57
CXXC1-208ENST00000587170 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
CXXC1-208ENST00000587170 PAXIP1Q6ZW49 1069 aaPredicted RBP18.62■□□□□ 0.57
CXXC1-208ENST00000587170 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
CXXC1-208ENST00000587170 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
CXXC1-208ENST00000587170 TSPYL4Q9UJ04 414 aa18.62■□□□□ 0.57
CXXC1-208ENST00000587170 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
CXXC1-208ENST00000587170 ZNF646O15015 1829 aaPredicted RBP18.62■□□□□ 0.57
CXXC1-208ENST00000587170 AOC2O75106 756 aa18.61■□□□□ 0.57
CXXC1-208ENST00000587170 HSP90AB3PQ58FF7 597 aa18.61■□□□□ 0.57
CXXC1-208ENST00000587170 CIAPIN1Q6FI81 312 aa18.61■□□□□ 0.57
CXXC1-208ENST00000587170 DPP8Q6V1X1 898 aaPredicted RBP18.61■□□□□ 0.57
CXXC1-208ENST00000587170 GLIS2Q9BZE0 524 aaPredicted RBP18.61■□□□□ 0.57
CXXC1-208ENST00000587170 MYH3P11055 1940 aa18.61■□□□□ 0.57
CXXC1-208ENST00000587170 CELF2O95319 508 aaKnown RBP18.6■□□□□ 0.57
CXXC1-208ENST00000587170 HIRAP54198 1017 aaPredicted RBP18.6■□□□□ 0.57
CXXC1-208ENST00000587170 TMC4Q7Z404 712 aa18.6■□□□□ 0.57
CXXC1-208ENST00000587170 MPNDQ8N594 471 aa18.6■□□□□ 0.57
CXXC1-208ENST00000587170 GRAPQ13588 217 aa18.59■□□□□ 0.57
CXXC1-208ENST00000587170 TNIP1Q15025 636 aa18.59■□□□□ 0.57
CXXC1-208ENST00000587170 GRAPLQ8TC17 118 aaPredicted RBP18.59■□□□□ 0.57
CXXC1-208ENST00000587170 TRPM4Q8TD43 1214 aa18.59■□□□□ 0.57
CXXC1-208ENST00000587170 SH3TC1Q8TE82 1336 aa18.58■□□□□ 0.57
CXXC1-208ENST00000587170 YDJCA8MPS7 323 aa18.58■□□□□ 0.56
CXXC1-208ENST00000587170 ANXA1P04083 346 aa18.58■□□□□ 0.56
CXXC1-208ENST00000587170 GRM1Q13255 1194 aa18.58■□□□□ 0.56
CXXC1-208ENST00000587170 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
CXXC1-208ENST00000587170 TSKSQ9UJT2 592 aa18.57■□□□□ 0.56
CXXC1-208ENST00000587170 SPEF2Q9C093 1822 aa18.56■□□□□ 0.56
CXXC1-208ENST00000587170 RAD17O75943 681 aa18.56■□□□□ 0.56
CXXC1-208ENST00000587170 EIF2S2P20042 333 aaKnown RBP18.56■□□□□ 0.56
CXXC1-208ENST00000587170 TCIRG1Q13488 830 aa18.56■□□□□ 0.56
CXXC1-208ENST00000587170 DDX46Q7L014 1031 aaKnown RBP18.56■□□□□ 0.56
CXXC1-208ENST00000587170 CDC37L1Q7L3B6 337 aa18.56■□□□□ 0.56
CXXC1-208ENST00000587170 COPS6Q7L5N1 327 aa18.56■□□□□ 0.56
CXXC1-208ENST00000587170 ZNF609O15014 1411 aa18.56■□□□□ 0.56
CXXC1-208ENST00000587170 MLLT1Q03111 559 aaPredicted RBP18.55■□□□□ 0.56
CXXC1-208ENST00000587170 XAGE3Q8WTP9 111 aa18.55■□□□□ 0.56
CXXC1-208ENST00000587170 DPF2Q92785 391 aa18.55■□□□□ 0.56
CXXC1-208ENST00000587170 BCL2L13Q9BXK5 485 aa18.55■□□□□ 0.56
CXXC1-208ENST00000587170 TRMT112Q9UI30 125 aaKnown RBP18.55■□□□□ 0.56
CXXC1-208ENST00000587170 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
CXXC1-208ENST00000587170 CCDC85CA6NKD9 419 aa18.54■□□□□ 0.56
CXXC1-208ENST00000587170 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
CXXC1-208ENST00000587170 NOGQ13253 232 aa18.54■□□□□ 0.56
CXXC1-208ENST00000587170 CNOT7Q9UIV1 285 aaKnown RBP18.54■□□□□ 0.56
CXXC1-208ENST00000587170 RIPK4P57078 832 aa18.53■□□□□ 0.56
CXXC1-208ENST00000587170 MICALL2Q8IY33 904 aa18.53■□□□□ 0.56
CXXC1-208ENST00000587170 MCOLN1Q9GZU1 580 aa18.53■□□□□ 0.56
CXXC1-208ENST00000587170 LAMB1P07942 1786 aa18.53■□□□□ 0.56
CXXC1-208ENST00000587170 PAPPA2Q9BXP8 1791 aa18.53■□□□□ 0.56
CXXC1-208ENST00000587170 H7C1D1 291 aa18.52■□□□□ 0.56
CXXC1-208ENST00000587170 TMPOP42166 694 aaKnown RBP18.52■□□□□ 0.56
CXXC1-208ENST00000587170 RPS12P25398 132 aaKnown RBP18.51■□□□□ 0.55
CXXC1-208ENST00000587170 AIMP1Q12904 312 aaKnown RBP18.51■□□□□ 0.55
CXXC1-208ENST00000587170 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
CXXC1-208ENST00000587170 ISCA1Q9BUE6 129 aa18.51■□□□□ 0.55
CXXC1-208ENST00000587170 RTL9Q8NET4 1388 aa18.51■□□□□ 0.55
CXXC1-208ENST00000587170 FAM155AB1AL88 458 aaPredicted RBP18.5■□□□□ 0.55
CXXC1-208ENST00000587170 PSMD14O00487 310 aa18.5■□□□□ 0.55
CXXC1-208ENST00000587170 CHL1O00533 1208 aa18.5■□□□□ 0.55
CXXC1-208ENST00000587170 HOXB7P09629 217 aa18.5■□□□□ 0.55
CXXC1-208ENST00000587170 HUNKP57058 714 aa18.5■□□□□ 0.55
CXXC1-208ENST00000587170 PLBD2Q8NHP8 589 aa18.5■□□□□ 0.55
CXXC1-208ENST00000587170 ZIC5Q96T25 663 aa18.5■□□□□ 0.55
CXXC1-208ENST00000587170 ZNF408Q9H9D4 720 aa18.5■□□□□ 0.55
CXXC1-208ENST00000587170 EGFRP00533 1210 aa18.49■□□□□ 0.55
CXXC1-208ENST00000587170 WASHC4Q2M389 1173 aa18.49■□□□□ 0.55
CXXC1-208ENST00000587170 USP48Q86UV5 1035 aa18.49■□□□□ 0.55
CXXC1-208ENST00000587170 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
CXXC1-208ENST00000587170 CELF1Q92879 486 aaKnown RBP18.49■□□□□ 0.55
CXXC1-208ENST00000587170 SAGE1Q9NXZ1 904 aa18.49■□□□□ 0.55
CXXC1-208ENST00000587170 CHPF2Q9P2E5 772 aa18.49■□□□□ 0.55
CXXC1-208ENST00000587170 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-208ENST00000587170 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
CXXC1-208ENST00000587170 SAMD7Q7Z3H4 446 aa18.48■□□□□ 0.55
CXXC1-208ENST00000587170 KRT26Q7Z3Y9 468 aa18.48■□□□□ 0.55
CXXC1-208ENST00000587170 POLLQ9UGP5 575 aa18.48■□□□□ 0.55
CXXC1-208ENST00000587170 ECM29Q5VYK3 1845 aa18.47■□□□□ 0.55
CXXC1-208ENST00000587170 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
CXXC1-208ENST00000587170 DBNDD1Q9H9R9 158 aa18.47■□□□□ 0.55
CXXC1-208ENST00000587170 ECE2O60344 883 aa18.46■□□□□ 0.55
CXXC1-208ENST00000587170 GPSM2P81274 684 aa18.46■□□□□ 0.55
CXXC1-208ENST00000587170 DGKZQ13574 1117 aa18.46■□□□□ 0.55
CXXC1-208ENST00000587170 TBC1D10BQ4KMP7 808 aaPredicted RBP18.46■□□□□ 0.55
CXXC1-208ENST00000587170 RGMBQ6NW40 437 aa18.46■□□□□ 0.55
CXXC1-208ENST00000587170 DLK2Q6UY11 383 aa18.46■□□□□ 0.55
CXXC1-208ENST00000587170 FAM89AQ96GI7 184 aa18.46■□□□□ 0.55
CXXC1-208ENST00000587170 GBA2Q9HCG7 927 aaPredicted RBP18.46■□□□□ 0.55
CXXC1-208ENST00000587170 NSFL1CQ9UNZ2 370 aaKnown RBP18.46■□□□□ 0.55
CXXC1-208ENST00000587170 HTTP42858 3142 aa18.45■□□□□ 0.54
CXXC1-208ENST00000587170 RALBP1Q15311 655 aa18.45■□□□□ 0.54
CXXC1-208ENST00000587170 ANKRD13DQ6ZTN6 518 aa18.45■□□□□ 0.54
CXXC1-208ENST00000587170 PODXL2Q9NZ53 605 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms