RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 FZD9O00144 591 aa17.14■□□□□ 0.33
SREBF1-223ENST00000584760 ALDH1B1P30837 517 aa17.14■□□□□ 0.33
SREBF1-223ENST00000584760 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
SREBF1-223ENST00000584760 ABT1Q9ULW3 272 aaKnown RBP17.14■□□□□ 0.33
SREBF1-223ENST00000584760 SCN4AP35499 1836 aa17.14■□□□□ 0.33
SREBF1-223ENST00000584760 RASSF10A6NK89 507 aa17.13■□□□□ 0.33
SREBF1-223ENST00000584760 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
SREBF1-223ENST00000584760 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
SREBF1-223ENST00000584760 RIC3Q7Z5B4 369 aa17.13■□□□□ 0.33
SREBF1-223ENST00000584760 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
SREBF1-223ENST00000584760 MYH3P11055 1940 aa17.13■□□□□ 0.33
SREBF1-223ENST00000584760 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
SREBF1-223ENST00000584760 HSPA8P11142 646 aaKnown RBP17.12■□□□□ 0.33
SREBF1-223ENST00000584760 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-223ENST00000584760 GPC2Q8N158 579 aa17.12■□□□□ 0.33
SREBF1-223ENST00000584760 JDP2Q8WYK2 163 aa17.12■□□□□ 0.33
SREBF1-223ENST00000584760 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
SREBF1-223ENST00000584760 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
SREBF1-223ENST00000584760 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
SREBF1-223ENST00000584760 GJA3Q9Y6H8 435 aa17.12■□□□□ 0.33
SREBF1-223ENST00000584760 WDR33Q9C0J8 1336 aaKnown RBP17.12■□□□□ 0.33
SREBF1-223ENST00000584760 COL4A1P02462 1669 aa17.11■□□□□ 0.33
SREBF1-223ENST00000584760 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
SREBF1-223ENST00000584760 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-223ENST00000584760 VAMP4O75379 141 aa17.1■□□□□ 0.33
SREBF1-223ENST00000584760 DDX58O95786 925 aaKnown RBP17.1■□□□□ 0.33
SREBF1-223ENST00000584760 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
SREBF1-223ENST00000584760 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
SREBF1-223ENST00000584760 SLC51AQ86UW1 340 aa17.1■□□□□ 0.33
SREBF1-223ENST00000584760 ABHD8Q96I13 439 aa17.1■□□□□ 0.33
SREBF1-223ENST00000584760 RBM17Q96I25 401 aaKnown RBP17.1■□□□□ 0.33
SREBF1-223ENST00000584760 MYD88Q99836 296 aa17.1■□□□□ 0.33
SREBF1-223ENST00000584760 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
SREBF1-223ENST00000584760 ABCC4O15439 1325 aa17.1■□□□□ 0.33
SREBF1-223ENST00000584760 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.33
SREBF1-223ENST00000584760 PAXIP1Q6ZW49 1069 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-223ENST00000584760 G2E3Q7L622 706 aa17.09■□□□□ 0.33
SREBF1-223ENST00000584760 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
SREBF1-223ENST00000584760 PSMD1Q99460 953 aa17.09■□□□□ 0.33
SREBF1-223ENST00000584760 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-223ENST00000584760 LTBP1Q14766 1721 aa17.08■□□□□ 0.32
SREBF1-223ENST00000584760 COL4A5P29400 1685 aa17.08■□□□□ 0.32
SREBF1-223ENST00000584760 PPEF1O14829 653 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-223ENST00000584760 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
SREBF1-223ENST00000584760 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-223ENST00000584760 GRM1Q13255 1194 aa17.08■□□□□ 0.32
SREBF1-223ENST00000584760 CC2D2BQ6DHV5 1058 aa17.08■□□□□ 0.32
SREBF1-223ENST00000584760 KSR2Q6VAB6 950 aa17.08■□□□□ 0.32
SREBF1-223ENST00000584760 MAP3K2Q9Y2U5 619 aa17.08■□□□□ 0.32
SREBF1-223ENST00000584760 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
SREBF1-223ENST00000584760 PI4KAP2A4QPH2 592 aa17.07■□□□□ 0.32
SREBF1-223ENST00000584760 EPS15P42566 896 aa17.07■□□□□ 0.32
SREBF1-223ENST00000584760 PI4KAP1Q8N8J0 262 aa17.07■□□□□ 0.32
SREBF1-223ENST00000584760 ZBTB38Q8NAP3 1195 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-223ENST00000584760 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
SREBF1-223ENST00000584760 DUOX1Q9NRD9 1551 aa17.06■□□□□ 0.32
SREBF1-223ENST00000584760 FLIIQ13045 1269 aa17.06■□□□□ 0.32
SREBF1-223ENST00000584760 FAM161AQ3B820 660 aa17.06■□□□□ 0.32
SREBF1-223ENST00000584760 RTL5Q5HYW3 569 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-223ENST00000584760 LARGE2Q8N3Y3 721 aa17.06■□□□□ 0.32
SREBF1-223ENST00000584760 CAPNS2Q96L46 248 aa17.06■□□□□ 0.32
SREBF1-223ENST00000584760 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-223ENST00000584760 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-223ENST00000584760 IGKV5-2P06315 115 aa17.05■□□□□ 0.32
SREBF1-223ENST00000584760 SF3B3Q15393 1217 aaKnown RBP17.05■□□□□ 0.32
SREBF1-223ENST00000584760 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
SREBF1-223ENST00000584760 BEGAINQ9BUH8 593 aa17.05■□□□□ 0.32
SREBF1-223ENST00000584760 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
SREBF1-223ENST00000584760 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
SREBF1-223ENST00000584760 TRAF5O00463 557 aa17.04■□□□□ 0.32
SREBF1-223ENST00000584760 PCCAP05165 728 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-223ENST00000584760 SCNN1DP51172 638 aa17.04■□□□□ 0.32
SREBF1-223ENST00000584760 GRAPQ13588 217 aa17.04■□□□□ 0.32
SREBF1-223ENST00000584760 CYP4F22Q6NT55 531 aa17.04■□□□□ 0.32
SREBF1-223ENST00000584760 DDX46Q7L014 1031 aaKnown RBP17.04■□□□□ 0.32
SREBF1-223ENST00000584760 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-223ENST00000584760 GPR101Q96P66 508 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-223ENST00000584760 CCDC85CA6NKD9 419 aa17.03■□□□□ 0.32
SREBF1-223ENST00000584760 BBOX1O75936 387 aa17.03■□□□□ 0.32
SREBF1-223ENST00000584760 ECE1P42892 770 aa17.03■□□□□ 0.32
SREBF1-223ENST00000584760 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-223ENST00000584760 CST9Q5W186 159 aa17.03■□□□□ 0.32
SREBF1-223ENST00000584760 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
SREBF1-223ENST00000584760 NEURL1BA8MQ27 555 aa17.02■□□□□ 0.32
SREBF1-223ENST00000584760 NEXNQ0ZGT2 675 aa17.02■□□□□ 0.32
SREBF1-223ENST00000584760 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
SREBF1-223ENST00000584760 USP50Q70EL3 339 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-223ENST00000584760 E9PSI1 815 aa17.01■□□□□ 0.31
SREBF1-223ENST00000584760 SP8Q8IXZ3 490 aa17.01■□□□□ 0.31
SREBF1-223ENST00000584760 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
SREBF1-223ENST00000584760 TSKSQ9UJT2 592 aa17.01■□□□□ 0.31
SREBF1-223ENST00000584760 PPIP5K2O43314 1243 aa17■□□□□ 0.31
SREBF1-223ENST00000584760 AOC2O75106 756 aa17■□□□□ 0.31
SREBF1-223ENST00000584760 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
SREBF1-223ENST00000584760 SLFN5Q08AF3 891 aa17■□□□□ 0.31
SREBF1-223ENST00000584760 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
SREBF1-223ENST00000584760 TMC4Q7Z404 712 aa17■□□□□ 0.31
SREBF1-223ENST00000584760 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
SREBF1-223ENST00000584760 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
SREBF1-223ENST00000584760 CELF1Q92879 486 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms