RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 GREM2Q9H772 168 aa15.47■□□□□ 0.07
CDK5R1-202ENST00000584716 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
CDK5R1-202ENST00000584716 H0YIN7 160 aa15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 ATP8B2P98198 1209 aa15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 SF3B3Q15393 1217 aaKnown RBP15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 FAM161AQ3B820 660 aa15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 CEP85Q6P2H3 762 aa15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 SEC31BQ9NQW1 1179 aa15.46■□□□□ 0.07
CDK5R1-202ENST00000584716 C10orf71Q711Q0 1435 aa15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 A0A0G2JLW4 131 aa15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 PNMA6EA0A0J9YXQ4 647 aa15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 ITGA6P23229 1130 aa15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 RABL6Q3YEC7 729 aaPredicted RBP15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 RPAP2Q8IXW5 612 aaPredicted RBP15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 ZNF622Q969S3 477 aaKnown RBP eCLIP15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 ZNF594Q96JF6 807 aaPredicted RBP15.45■□□□□ 0.06
CDK5R1-202ENST00000584716 ANKRD18BA2A2Z9 1011 aa15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 IFIT5Q13325 482 aaKnown RBP15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 AAMPQ13685 434 aa15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 CCDC57Q2TAC2 916 aa15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 DDX46Q7L014 1031 aaKnown RBP15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 SIRT2Q8IXJ6 389 aa15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 KIF13BQ9NQT8 1826 aa15.44■□□□□ 0.06
CDK5R1-202ENST00000584716 RIC1Q4ADV7 1423 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 COL11A2P13942 1736 aaPredicted RBP15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 SPEF2Q9C093 1822 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 SRGNP10124 158 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 DPEP1P16444 411 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 TAF7LQ5H9L4 462 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 CD2APQ9Y5K6 639 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 CACNA1SQ13698 1873 aa15.43■□□□□ 0.06
CDK5R1-202ENST00000584716 NPR1P16066 1061 aa15.42■□□□□ 0.06
CDK5R1-202ENST00000584716 TGFB2P61812 414 aa15.42■□□□□ 0.06
CDK5R1-202ENST00000584716 MTX1Q13505 466 aa15.42■□□□□ 0.06
CDK5R1-202ENST00000584716 CRY2Q49AN0 593 aa15.42■□□□□ 0.06
CDK5R1-202ENST00000584716 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
CDK5R1-202ENST00000584716 FHDC1Q9C0D6 1143 aaPredicted RBP15.42■□□□□ 0.06
CDK5R1-202ENST00000584716 PA2G4Q9UQ80 394 aaKnown RBP15.42■□□□□ 0.06
CDK5R1-202ENST00000584716 RFX5P48382 616 aaPredicted RBP15.41■□□□□ 0.06
CDK5R1-202ENST00000584716 POLA2Q14181 598 aa15.41■□□□□ 0.06
CDK5R1-202ENST00000584716 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
CDK5R1-202ENST00000584716 SSH3Q8TE77 659 aa15.41■□□□□ 0.06
CDK5R1-202ENST00000584716 SIL1Q9H173 461 aa15.41■□□□□ 0.06
CDK5R1-202ENST00000584716 COL4A1P02462 1669 aa15.41■□□□□ 0.06
CDK5R1-202ENST00000584716 HMMRO75330 724 aa15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 KCNA3P22001 575 aa15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 ANKRD18AQ8IVF6 992 aa15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 CRAMP1Q96RY5 1269 aa15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 CDC5LQ99459 802 aaKnown RBP15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 PUS3Q9BZE2 481 aaKnown RBP15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 PDZRN3Q9UPQ7 1066 aa15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 KIAA1551Q9HCM1 1747 aa15.4■□□□□ 0.06
CDK5R1-202ENST00000584716 LRP5O75197 1615 aa15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 IGHDP01880 384 aa15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 RPS8P62241 208 aaKnown RBP15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 PTPN12Q05209 780 aaKnown RBP15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 GRAPQ13588 217 aa15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 STYK1Q6J9G0 422 aa15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 LDHAL6AQ6ZMR3 332 aa15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 MPHOSPH8Q99549 860 aa15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 RWDD1Q9H446 243 aaPredicted RBP15.39■□□□□ 0.05
CDK5R1-202ENST00000584716 RTL9Q8NET4 1388 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 APBB1O00213 710 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 ERICH6BQ5W0A0 696 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 CNKSR1Q969H4 720 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 SYT17Q9BSW7 474 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 CNNM1Q9NRU3 951 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 EXOC6BQ9Y2D4 811 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 DLEC1Q9Y238 1755 aa15.38■□□□□ 0.05
CDK5R1-202ENST00000584716 PPEF1O14829 653 aaPredicted RBP15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 G3BP1Q13283 466 aaKnown RBP eCLIP15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 OS9Q13438 667 aaPredicted RBP15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 SLC51AQ86UW1 340 aa15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 TTLL6Q8N841 843 aa15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 COPRSQ9NQ92 184 aa15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 PPP4R2Q9NY27 417 aa15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 PIM2Q9P1W9 311 aa15.37■□□□□ 0.05
CDK5R1-202ENST00000584716 SLX4Q8IY92 1834 aa15.36■□□□□ 0.05
CDK5R1-202ENST00000584716 BBOX1O75936 387 aa15.36■□□□□ 0.05
CDK5R1-202ENST00000584716 B4GALNT3Q6L9W6 998 aa15.36■□□□□ 0.05
CDK5R1-202ENST00000584716 PRPF40BQ6NWY9 871 aaKnown RBP15.36■□□□□ 0.05
CDK5R1-202ENST00000584716 EYA2O00167 538 aa15.35■□□□□ 0.05
CDK5R1-202ENST00000584716 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms