RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 H7C1D1 291 aa16.24■□□□□ 0.19
TOP3A-215ENST00000583328 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
TOP3A-215ENST00000583328 NOGQ13253 232 aa16.24■□□□□ 0.19
TOP3A-215ENST00000583328 USP48Q86UV5 1035 aa16.24■□□□□ 0.19
TOP3A-215ENST00000583328 TRPM4Q8TD43 1214 aa16.24■□□□□ 0.19
TOP3A-215ENST00000583328 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
TOP3A-215ENST00000583328 PCDH10Q9P2E7 1040 aa16.24■□□□□ 0.19
TOP3A-215ENST00000583328 CNOT7Q9UIV1 285 aaKnown RBP16.24■□□□□ 0.19
TOP3A-215ENST00000583328 ERBB4Q15303 1308 aa16.23■□□□□ 0.19
TOP3A-215ENST00000583328 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
TOP3A-215ENST00000583328 HUNKP57058 714 aa16.23■□□□□ 0.19
TOP3A-215ENST00000583328 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
TOP3A-215ENST00000583328 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-215ENST00000583328 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
TOP3A-215ENST00000583328 ZIC5Q96T25 663 aa16.22■□□□□ 0.19
TOP3A-215ENST00000583328 TRPM7Q96QT4 1865 aa16.22■□□□□ 0.19
TOP3A-215ENST00000583328 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
TOP3A-215ENST00000583328 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
TOP3A-215ENST00000583328 NUP98P52948 1817 aa16.2■□□□□ 0.18
TOP3A-215ENST00000583328 YDJCA8MPS7 323 aa16.2■□□□□ 0.18
TOP3A-215ENST00000583328 GRAPQ13588 217 aa16.2■□□□□ 0.18
TOP3A-215ENST00000583328 PDIA6Q15084 440 aa16.2■□□□□ 0.18
TOP3A-215ENST00000583328 HSP90AB3PQ58FF7 597 aa16.2■□□□□ 0.18
TOP3A-215ENST00000583328 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-215ENST00000583328 TSPYL4Q9UJ04 414 aa16.2■□□□□ 0.18
TOP3A-215ENST00000583328 ANXA1P04083 346 aa16.19■□□□□ 0.18
TOP3A-215ENST00000583328 RGMBQ6NW40 437 aa16.19■□□□□ 0.18
TOP3A-215ENST00000583328 DLK2Q6UY11 383 aa16.19■□□□□ 0.18
TOP3A-215ENST00000583328 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
TOP3A-215ENST00000583328 PLEKHF1Q96S99 279 aa16.19■□□□□ 0.18
TOP3A-215ENST00000583328 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
TOP3A-215ENST00000583328 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-215ENST00000583328 CASP8AP2Q9UKL3 1982 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 AIMP1Q12904 312 aaKnown RBP16.18■□□□□ 0.18
TOP3A-215ENST00000583328 PROSER3Q2NL68 480 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 KRT26Q7Z3Y9 468 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 C2orf69Q8N8R5 385 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 DPF2Q92785 391 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 PNNQ9H307 717 aaKnown RBP16.18■□□□□ 0.18
TOP3A-215ENST00000583328 GBA2Q9HCG7 927 aaPredicted RBP16.18■□□□□ 0.18
TOP3A-215ENST00000583328 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
TOP3A-215ENST00000583328 PSMD14O00487 310 aa16.17■□□□□ 0.18
TOP3A-215ENST00000583328 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-215ENST00000583328 WASHC4Q2M389 1173 aa16.17■□□□□ 0.18
TOP3A-215ENST00000583328 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-215ENST00000583328 RBM26Q5T8P6 1007 aaKnown RBP16.17■□□□□ 0.18
TOP3A-215ENST00000583328 COPS6Q7L5N1 327 aa16.17■□□□□ 0.18
TOP3A-215ENST00000583328 TMC4Q7Z404 712 aa16.17■□□□□ 0.18
TOP3A-215ENST00000583328 CCDC102AQ96A19 550 aa16.17■□□□□ 0.18
TOP3A-215ENST00000583328 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
TOP3A-215ENST00000583328 MAPK8IP3Q9UPT6 1336 aa16.17■□□□□ 0.18
TOP3A-215ENST00000583328 ZNF157P51786 506 aaPredicted RBP16.16■□□□□ 0.18
TOP3A-215ENST00000583328 KIF23Q02241 960 aaPredicted RBP16.16■□□□□ 0.18
TOP3A-215ENST00000583328 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
TOP3A-215ENST00000583328 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
TOP3A-215ENST00000583328 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
TOP3A-215ENST00000583328 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
TOP3A-215ENST00000583328 SAGE1Q9NXZ1 904 aa16.16■□□□□ 0.18
TOP3A-215ENST00000583328 SH3TC1Q8TE82 1336 aa16.16■□□□□ 0.18
TOP3A-215ENST00000583328 FAM155AB1AL88 458 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-215ENST00000583328 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
TOP3A-215ENST00000583328 TRPA1O75762 1119 aa16.15■□□□□ 0.18
TOP3A-215ENST00000583328 SOX10P56693 466 aa16.15■□□□□ 0.18
TOP3A-215ENST00000583328 NSFL1CQ9UNZ2 370 aaKnown RBP16.15■□□□□ 0.18
TOP3A-215ENST00000583328 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
TOP3A-215ENST00000583328 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
TOP3A-215ENST00000583328 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
TOP3A-215ENST00000583328 RNF186Q9NXI6 227 aa16.14■□□□□ 0.17
TOP3A-215ENST00000583328 EGFRP00533 1210 aa16.13■□□□□ 0.17
TOP3A-215ENST00000583328 RPS12P25398 132 aaKnown RBP16.13■□□□□ 0.17
TOP3A-215ENST00000583328 RIPK4P57078 832 aa16.12■□□□□ 0.17
TOP3A-215ENST00000583328 DOK7Q18PE1 504 aa16.12■□□□□ 0.17
TOP3A-215ENST00000583328 EYA3Q99504 573 aa16.12■□□□□ 0.17
TOP3A-215ENST00000583328 BABAM1Q9NWV8 329 aa16.12■□□□□ 0.17
TOP3A-215ENST00000583328 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
TOP3A-215ENST00000583328 ECE2O60344 883 aa16.11■□□□□ 0.17
TOP3A-215ENST00000583328 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
TOP3A-215ENST00000583328 SULF1Q8IWU6 871 aa16.11■□□□□ 0.17
TOP3A-215ENST00000583328 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
TOP3A-215ENST00000583328 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
TOP3A-215ENST00000583328 POLLQ9UGP5 575 aa16.11■□□□□ 0.17
TOP3A-215ENST00000583328 SLC10A3P09131 477 aa16.1■□□□□ 0.17
TOP3A-215ENST00000583328 GPSM2P81274 684 aa16.1■□□□□ 0.17
TOP3A-215ENST00000583328 CTU1Q7Z7A3 348 aaKnown RBP16.1■□□□□ 0.17
TOP3A-215ENST00000583328 CSRNP1Q96S65 589 aa16.1■□□□□ 0.17
TOP3A-215ENST00000583328 G3V3G9 751 aa16.09■□□□□ 0.17
TOP3A-215ENST00000583328 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
TOP3A-215ENST00000583328 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
TOP3A-215ENST00000583328 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
TOP3A-215ENST00000583328 GGA3Q9NZ52 723 aa16.09■□□□□ 0.17
TOP3A-215ENST00000583328 REM2Q8IYK8 340 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-215ENST00000583328 CDCA5Q96FF9 252 aa16.08■□□□□ 0.16
TOP3A-215ENST00000583328 ZC3H12CQ9C0D7 883 aaKnown RBP16.08■□□□□ 0.16
TOP3A-215ENST00000583328 RTL9Q8NET4 1388 aa16.08■□□□□ 0.16
TOP3A-215ENST00000583328 PDE4DIPQ5VU43 2346 aa16.07■□□□□ 0.16
TOP3A-215ENST00000583328 VIL1P09327 827 aaKnown RBP16.07■□□□□ 0.16
TOP3A-215ENST00000583328 RPS8P62241 208 aaKnown RBP16.07■□□□□ 0.16
TOP3A-215ENST00000583328 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms