RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 RABL6Q3YEC7 729 aaPredicted RBP11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 TAF7LQ5H9L4 462 aa11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 RPGRQ92834 1020 aaKnown RBP11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 BRIP1Q9BX63 1249 aa11.34□□□□□ -0.59
PDLIM1P2-201ENST00000582923 SPEF2Q9C093 1822 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 PTGER2P43116 358 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 MTX1Q13505 466 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CCDC57Q2TAC2 916 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 TTLL11Q8NHH1 800 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 GREM2Q9H772 168 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 PPP1R1BQ9UD71 204 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
PDLIM1P2-201ENST00000582923 LRP5O75197 1615 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 RTL9Q8NET4 1388 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 DLEC1Q9Y238 1755 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 ITGA6P23229 1130 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SF3B3Q15393 1217 aaKnown RBP11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 C2CD5Q86YS7 1000 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CCDC136Q96JN2 1154 aa11.32□□□□□ -0.6
PDLIM1P2-201ENST00000582923 H0YIN7 160 aa11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CSF1RP07333 972 aa11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 RBM17Q96I25 401 aaKnown RBP11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CDC5LQ99459 802 aaKnown RBP11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 RWDD1Q9H446 243 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 PPP4R2Q9NY27 417 aa11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CACNA1SQ13698 1873 aa11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 KIAA1551Q9HCM1 1747 aa11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 NPR1P16066 1061 aa11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SIRT2Q8IXJ6 389 aa11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SEC31BQ9NQW1 1179 aa11.3□□□□□ -0.6
PDLIM1P2-201ENST00000582923 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CHRNA5P30532 468 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 POLA2Q14181 598 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 ANKRD18AQ8IVF6 992 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 MASTLQ96GX5 879 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SIL1Q9H173 461 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 COL4A1P02462 1669 aa11.29□□□□□ -0.6
PDLIM1P2-201ENST00000582923 TAF1P21675 1872 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SURF6O75683 361 aaKnown RBP11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 SRGNP10124 158 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 GRAPQ13588 217 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 B4GALNT3Q6L9W6 998 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 GRAPLQ8TC17 118 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 CNNM1Q9NRU3 951 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 EXOC6BQ9Y2D4 811 aa11.28□□□□□ -0.6
PDLIM1P2-201ENST00000582923 APBB1O00213 710 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 DPEP1P16444 411 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 TGFB2P61812 414 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 LDHAL6AQ6ZMR3 332 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 CNKSR1Q969H4 720 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 CRAMP1Q96RY5 1269 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
PDLIM1P2-201ENST00000582923 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 A0A0G2JLW4 131 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 EYA2O00167 538 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 IGHDP01880 384 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 ALDH1B1P30837 517 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 RPS8P62241 208 aaKnown RBP11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 BCL11AQ9H165 835 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 A0A1B0GUL6 1792 aa11.26□□□□□ -0.61
PDLIM1P2-201ENST00000582923 CIAO1O76071 339 aa11.25□□□□□ -0.61
PDLIM1P2-201ENST00000582923 IL15P40933 162 aaPredicted RBP11.25□□□□□ -0.61
PDLIM1P2-201ENST00000582923 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
PDLIM1P2-201ENST00000582923 PRPF40BQ6NWY9 871 aaKnown RBP11.25□□□□□ -0.61
PDLIM1P2-201ENST00000582923 CENPQQ7L2Z9 268 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms