RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
CCDC57-216ENST00000582885 COPRSQ9NQ92 184 aa14.93□□□□□ -0.02
CCDC57-216ENST00000582885 ABCC12Q96J65 1359 aa14.93□□□□□ -0.02
CCDC57-216ENST00000582885 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
CCDC57-216ENST00000582885 MMP10P09238 476 aa14.92□□□□□ -0.02
CCDC57-216ENST00000582885 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
CCDC57-216ENST00000582885 RFX5P48382 616 aaPredicted RBP14.92□□□□□ -0.02
CCDC57-216ENST00000582885 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
CCDC57-216ENST00000582885 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
CCDC57-216ENST00000582885 PARP3Q9Y6F1 533 aa14.92□□□□□ -0.02
CCDC57-216ENST00000582885 DLEC1Q9Y238 1755 aa14.91□□□□□ -0.02
CCDC57-216ENST00000582885 ST5P78524 1137 aa14.91□□□□□ -0.02
CCDC57-216ENST00000582885 CCDC57Q2TAC2 916 aa14.91□□□□□ -0.02
CCDC57-216ENST00000582885 CCDC152Q4G0S7 254 aa14.91□□□□□ -0.02
CCDC57-216ENST00000582885 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
CCDC57-216ENST00000582885 PDGFDQ9GZP0 370 aaPredicted RBP14.91□□□□□ -0.02
CCDC57-216ENST00000582885 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
CCDC57-216ENST00000582885 LRP5O75197 1615 aa14.91□□□□□ -0.02
CCDC57-216ENST00000582885 NPHP1O15259 732 aa14.9□□□□□ -0.02
CCDC57-216ENST00000582885 RAB11FIP3O75154 756 aa14.9□□□□□ -0.02
CCDC57-216ENST00000582885 PTPN12Q05209 780 aaKnown RBP14.9□□□□□ -0.02
CCDC57-216ENST00000582885 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
CCDC57-216ENST00000582885 ANKRD18BA2A2Z9 1011 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 KLRG2A4D1S0 409 aaPredicted RBP14.89□□□□□ -0.03
CCDC57-216ENST00000582885 SURF6O75683 361 aaKnown RBP14.89□□□□□ -0.03
CCDC57-216ENST00000582885 FAM161AQ3B820 660 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 MSL1Q68DK7 614 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 BRIP1Q9BX63 1249 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 MTFR1LQ9H019 292 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 GREM2Q9H772 168 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 CHMP3Q9Y3E7 222 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 COL11A2P13942 1736 aaPredicted RBP14.89□□□□□ -0.03
CCDC57-216ENST00000582885 CACNA1SQ13698 1873 aa14.89□□□□□ -0.03
CCDC57-216ENST00000582885 CIAO1O76071 339 aa14.88□□□□□ -0.03
CCDC57-216ENST00000582885 ITGA6P23229 1130 aa14.88□□□□□ -0.03
CCDC57-216ENST00000582885 NUCB1Q02818 461 aa14.88□□□□□ -0.03
CCDC57-216ENST00000582885 R3HDM1Q15032 1099 aaKnown RBP14.88□□□□□ -0.03
CCDC57-216ENST00000582885 CRY2Q49AN0 593 aa14.88□□□□□ -0.03
CCDC57-216ENST00000582885 ERC1Q8IUD2 1116 aa14.88□□□□□ -0.03
CCDC57-216ENST00000582885 G3BP1Q13283 466 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC57-216ENST00000582885 EXOC6BQ9Y2D4 811 aa14.87□□□□□ -0.03
CCDC57-216ENST00000582885 PDE6BP35913 854 aa14.86□□□□□ -0.03
CCDC57-216ENST00000582885 C3orf67Q6ZVT6 689 aa14.86□□□□□ -0.03
CCDC57-216ENST00000582885 KIF1BPQ96EK5 621 aa14.86□□□□□ -0.03
CCDC57-216ENST00000582885 CDC5LQ99459 802 aaKnown RBP14.86□□□□□ -0.03
CCDC57-216ENST00000582885 LRRCC1Q9C099 1032 aa14.86□□□□□ -0.03
CCDC57-216ENST00000582885 PDZRN3Q9UPQ7 1066 aa14.86□□□□□ -0.03
CCDC57-216ENST00000582885 PA2G4Q9UQ80 394 aaKnown RBP14.86□□□□□ -0.03
CCDC57-216ENST00000582885 EYA2O00167 538 aa14.85□□□□□ -0.03
CCDC57-216ENST00000582885 HOXA10P31260 410 aaPredicted RBP14.85□□□□□ -0.03
CCDC57-216ENST00000582885 IL15P40933 162 aaPredicted RBP14.85□□□□□ -0.03
CCDC57-216ENST00000582885 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
CCDC57-216ENST00000582885 ANKRD45Q5TZF3 282 aa14.85□□□□□ -0.03
CCDC57-216ENST00000582885 CHD1LQ86WJ1 897 aa14.85□□□□□ -0.03
CCDC57-216ENST00000582885 KLHDC4Q8TBB5 520 aa14.85□□□□□ -0.03
CCDC57-216ENST00000582885 CCDC85AQ96PX6 553 aaPredicted RBP14.85□□□□□ -0.03
CCDC57-216ENST00000582885 ARAP2Q8WZ64 1704 aa14.85□□□□□ -0.03
CCDC57-216ENST00000582885 C10orf71Q711Q0 1435 aa14.84□□□□□ -0.03
CCDC57-216ENST00000582885 COL4A1P02462 1669 aa14.84□□□□□ -0.03
CCDC57-216ENST00000582885 LRRC37AA6NMS7 1700 aa14.84□□□□□ -0.03
CCDC57-216ENST00000582885 KIAA1551Q9HCM1 1747 aa14.84□□□□□ -0.03
CCDC57-216ENST00000582885 OS9Q13438 667 aaPredicted RBP14.84□□□□□ -0.03
CCDC57-216ENST00000582885 DDX46Q7L014 1031 aaKnown RBP14.84□□□□□ -0.03
CCDC57-216ENST00000582885 ATG9AQ7Z3C6 839 aa14.84□□□□□ -0.03
CCDC57-216ENST00000582885 CCDC24Q8N4L8 307 aa14.84□□□□□ -0.03
CCDC57-216ENST00000582885 RHPN1Q8TCX5 695 aa14.84□□□□□ -0.03
CCDC57-216ENST00000582885 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
CCDC57-216ENST00000582885 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
CCDC57-216ENST00000582885 BRCA1P38398 1863 aaKnown RBP14.84□□□□□ -0.03
CCDC57-216ENST00000582885 SASH1O94885 1247 aa14.83□□□□□ -0.04
CCDC57-216ENST00000582885 POLD1P28340 1107 aa14.83□□□□□ -0.04
CCDC57-216ENST00000582885 IGHMBP2P38935 993 aaKnown RBP14.83□□□□□ -0.04
CCDC57-216ENST00000582885 LDHAL6AQ6ZMR3 332 aa14.83□□□□□ -0.04
CCDC57-216ENST00000582885 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.04
CCDC57-216ENST00000582885 CRAMP1Q96RY5 1269 aa14.83□□□□□ -0.04
CCDC57-216ENST00000582885 SIL1Q9H173 461 aa14.83□□□□□ -0.04
CCDC57-216ENST00000582885 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
CCDC57-216ENST00000582885 RIPOR2Q9Y4F9 1068 aa14.83□□□□□ -0.04
CCDC57-216ENST00000582885 AK9Q5TCS8 1911 aa14.82□□□□□ -0.04
CCDC57-216ENST00000582885 PSDA5PKW4 1024 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-216ENST00000582885 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
CCDC57-216ENST00000582885 RPS8P62241 208 aaKnown RBP14.82□□□□□ -0.04
CCDC57-216ENST00000582885 ANKRD18AQ8IVF6 992 aa14.82□□□□□ -0.04
CCDC57-216ENST00000582885 RBM17Q96I25 401 aaKnown RBP14.82□□□□□ -0.04
CCDC57-216ENST00000582885 MPHOSPH8Q99549 860 aa14.82□□□□□ -0.04
CCDC57-216ENST00000582885 GPR108Q9NPR9 543 aa14.82□□□□□ -0.04
CCDC57-216ENST00000582885 BSDC1Q9NW68 430 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-216ENST00000582885 SRGNP10124 158 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 NPR1P16066 1061 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 GRAPQ13588 217 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 LRRC24Q50LG9 513 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 GRAPLQ8TC17 118 aaPredicted RBP14.81□□□□□ -0.04
CCDC57-216ENST00000582885 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 PUS3Q9BZE2 481 aaKnown RBP14.81□□□□□ -0.04
CCDC57-216ENST00000582885 LNPKQ9C0E8 428 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 CNNM1Q9NRU3 951 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 MROH5Q6ZUA9 1318 aa14.81□□□□□ -0.04
CCDC57-216ENST00000582885 SLX4Q8IY92 1834 aa14.8□□□□□ -0.04
CCDC57-216ENST00000582885 APBB1O00213 710 aa14.8□□□□□ -0.04
CCDC57-216ENST00000582885 BBOX1O75936 387 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms