RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 CEP85Q6P2H3 762 aa14.39□□□□□ -0.11
GGA3-211ENST00000582232 C1orf115Q9H7X2 142 aa14.39□□□□□ -0.11
GGA3-211ENST00000582232 PDZRN3Q9UPQ7 1066 aa14.39□□□□□ -0.11
GGA3-211ENST00000582232 PCDHB15Q9Y5E8 787 aa14.39□□□□□ -0.11
GGA3-211ENST00000582232 PDE6BP35913 854 aa14.38□□□□□ -0.11
GGA3-211ENST00000582232 LMBR1LQ6UX01 489 aa14.38□□□□□ -0.11
GGA3-211ENST00000582232 LRP5O75197 1615 aa14.37□□□□□ -0.11
GGA3-211ENST00000582232 POLA2Q14181 598 aa14.37□□□□□ -0.11
GGA3-211ENST00000582232 CCDC152Q4G0S7 254 aa14.37□□□□□ -0.11
GGA3-211ENST00000582232 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
GGA3-211ENST00000582232 SIRT2Q8IXJ6 389 aa14.37□□□□□ -0.11
GGA3-211ENST00000582232 CCDC24Q8N4L8 307 aa14.37□□□□□ -0.11
GGA3-211ENST00000582232 SSH3Q8TE77 659 aa14.37□□□□□ -0.11
GGA3-211ENST00000582232 HOXA10P31260 410 aaPredicted RBP14.36□□□□□ -0.11
GGA3-211ENST00000582232 DLEC1Q9Y238 1755 aa14.35□□□□□ -0.11
GGA3-211ENST00000582232 PNMA6EA0A0J9YXQ4 647 aa14.35□□□□□ -0.11
GGA3-211ENST00000582232 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
GGA3-211ENST00000582232 HMMRO75330 724 aa14.35□□□□□ -0.11
GGA3-211ENST00000582232 RFX5P48382 616 aaPredicted RBP14.35□□□□□ -0.11
GGA3-211ENST00000582232 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
GGA3-211ENST00000582232 GREM2Q9H772 168 aa14.35□□□□□ -0.11
GGA3-211ENST00000582232 CD2APQ9Y5K6 639 aa14.35□□□□□ -0.11
GGA3-211ENST00000582232 COL11A2P13942 1736 aaPredicted RBP14.35□□□□□ -0.11
GGA3-211ENST00000582232 SRGNP10124 158 aa14.34□□□□□ -0.11
GGA3-211ENST00000582232 TGFB2P61812 414 aa14.34□□□□□ -0.11
GGA3-211ENST00000582232 IFIT5Q13325 482 aaKnown RBP14.34□□□□□ -0.11
GGA3-211ENST00000582232 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
GGA3-211ENST00000582232 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
GGA3-211ENST00000582232 COPRSQ9NQ92 184 aa14.34□□□□□ -0.11
GGA3-211ENST00000582232 KIAA1551Q9HCM1 1747 aa14.34□□□□□ -0.11
GGA3-211ENST00000582232 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
GGA3-211ENST00000582232 NPR1P16066 1061 aa14.33□□□□□ -0.12
GGA3-211ENST00000582232 ITGA6P23229 1130 aa14.33□□□□□ -0.12
GGA3-211ENST00000582232 PTPN12Q05209 780 aaKnown RBP14.33□□□□□ -0.12
GGA3-211ENST00000582232 DDX46Q7L014 1031 aaKnown RBP14.33□□□□□ -0.12
GGA3-211ENST00000582232 CRAMP1Q96RY5 1269 aa14.33□□□□□ -0.12
GGA3-211ENST00000582232 PPP4R2Q9NY27 417 aa14.33□□□□□ -0.12
GGA3-211ENST00000582232 FBXO3Q9UK99 471 aa14.33□□□□□ -0.12
GGA3-211ENST00000582232 TAF1P21675 1872 aa14.32□□□□□ -0.12
GGA3-211ENST00000582232 H0YIN7 160 aa14.32□□□□□ -0.12
GGA3-211ENST00000582232 STYK1Q6J9G0 422 aa14.32□□□□□ -0.12
GGA3-211ENST00000582232 RPGRQ92834 1020 aaKnown RBP14.32□□□□□ -0.12
GGA3-211ENST00000582232 MASTLQ96GX5 879 aa14.32□□□□□ -0.12
GGA3-211ENST00000582232 RBM17Q96I25 401 aaKnown RBP14.32□□□□□ -0.12
GGA3-211ENST00000582232 CDC5LQ99459 802 aaKnown RBP14.32□□□□□ -0.12
GGA3-211ENST00000582232 RWDD1Q9H446 243 aaPredicted RBP14.32□□□□□ -0.12
GGA3-211ENST00000582232 SEC31BQ9NQW1 1179 aa14.32□□□□□ -0.12
GGA3-211ENST00000582232 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
GGA3-211ENST00000582232 CHMP3Q9Y3E7 222 aa14.32□□□□□ -0.12
GGA3-211ENST00000582232 C2CD5Q86YS7 1000 aa14.31□□□□□ -0.12
GGA3-211ENST00000582232 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
GGA3-211ENST00000582232 DCTPP1Q9H773 170 aa14.31□□□□□ -0.12
GGA3-211ENST00000582232 COL4A1P02462 1669 aa14.3□□□□□ -0.12
GGA3-211ENST00000582232 BRCA1P38398 1863 aaKnown RBP14.3□□□□□ -0.12
GGA3-211ENST00000582232 BBOX1O75936 387 aa14.3□□□□□ -0.12
GGA3-211ENST00000582232 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
GGA3-211ENST00000582232 RPS8P62241 208 aaKnown RBP14.3□□□□□ -0.12
GGA3-211ENST00000582232 GRAPQ13588 217 aa14.3□□□□□ -0.12
GGA3-211ENST00000582232 GRAPLQ8TC17 118 aaPredicted RBP14.3□□□□□ -0.12
GGA3-211ENST00000582232 CIAO1O76071 339 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 IGHDP01880 384 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 KCNA3P22001 575 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 HSP90AB4PQ58FF6 505 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 TMC4Q7Z404 712 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 ANKRD18AQ8IVF6 992 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 CELF1Q92879 486 aaKnown RBP14.29□□□□□ -0.12
GGA3-211ENST00000582232 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 BSDC1Q9NW68 430 aaPredicted RBP14.29□□□□□ -0.12
GGA3-211ENST00000582232 SPEF2Q9C093 1822 aa14.29□□□□□ -0.12
GGA3-211ENST00000582232 EYA2O00167 538 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 CHRNA5P30532 468 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 IGHMBP2P38935 993 aaKnown RBP14.28□□□□□ -0.12
GGA3-211ENST00000582232 TAF7LQ5H9L4 462 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 LDHAL6AQ6ZMR3 332 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 KLHDC4Q8TBB5 520 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 CNKSR1Q969H4 720 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
GGA3-211ENST00000582232 PA2G4Q9UQ80 394 aaKnown RBP14.28□□□□□ -0.12
GGA3-211ENST00000582232 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
GGA3-211ENST00000582232 LRRC37AA6NMS7 1700 aa14.27□□□□□ -0.12
GGA3-211ENST00000582232 KDM2BQ8NHM5 1336 aa14.27□□□□□ -0.12
GGA3-211ENST00000582232 RAB11FIP3O75154 756 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 SURF6O75683 361 aaKnown RBP14.27□□□□□ -0.13
GGA3-211ENST00000582232 DPEP1P16444 411 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 MPHOSPH8Q99549 860 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 CACNA1SQ13698 1873 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 SLX4Q8IY92 1834 aa14.27□□□□□ -0.13
GGA3-211ENST00000582232 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
GGA3-211ENST00000582232 IL15P40933 162 aaPredicted RBP14.26□□□□□ -0.13
GGA3-211ENST00000582232 G3BP1Q13283 466 aaKnown RBP eCLIP14.26□□□□□ -0.13
GGA3-211ENST00000582232 LRRC24Q50LG9 513 aa14.26□□□□□ -0.13
GGA3-211ENST00000582232 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
GGA3-211ENST00000582232 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
GGA3-211ENST00000582232 PUS3Q9BZE2 481 aaKnown RBP14.26□□□□□ -0.13
GGA3-211ENST00000582232 PIM2Q9P1W9 311 aa14.26□□□□□ -0.13
GGA3-211ENST00000582232 A0A1B0GUL6 1792 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms