RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 NOGQ13253 232 aa16.9■□□□□ 0.3
SS18-219ENST00000581570 TNIP1Q15025 636 aa16.9■□□□□ 0.3
SS18-219ENST00000581570 PARP10Q53GL7 1025 aa16.9■□□□□ 0.3
SS18-219ENST00000581570 DPP8Q6V1X1 898 aaPredicted RBP16.9■□□□□ 0.3
SS18-219ENST00000581570 CDHR2Q9BYE9 1310 aa16.9■□□□□ 0.3
SS18-219ENST00000581570 BBOX1O75936 387 aa16.89■□□□□ 0.29
SS18-219ENST00000581570 SLC10A5Q5PT55 438 aa16.89■□□□□ 0.29
SS18-219ENST00000581570 SP8Q8IXZ3 490 aa16.89■□□□□ 0.29
SS18-219ENST00000581570 MPNDQ8N594 471 aa16.89■□□□□ 0.29
SS18-219ENST00000581570 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
SS18-219ENST00000581570 ZIC5Q96T25 663 aa16.89■□□□□ 0.29
SS18-219ENST00000581570 ABCC4O15439 1325 aa16.89■□□□□ 0.29
SS18-219ENST00000581570 H7C1D1 291 aa16.88■□□□□ 0.29
SS18-219ENST00000581570 HUNKP57058 714 aa16.88■□□□□ 0.29
SS18-219ENST00000581570 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
SS18-219ENST00000581570 USP48Q86UV5 1035 aa16.88■□□□□ 0.29
SS18-219ENST00000581570 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
SS18-219ENST00000581570 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
SS18-219ENST00000581570 NEFMP07197 916 aa16.87■□□□□ 0.29
SS18-219ENST00000581570 PPP2R1AP30153 589 aa16.87■□□□□ 0.29
SS18-219ENST00000581570 NUP98P52948 1817 aa16.86■□□□□ 0.29
SS18-219ENST00000581570 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
SS18-219ENST00000581570 SHTN1A0MZ66 631 aa16.85■□□□□ 0.29
SS18-219ENST00000581570 DLK2Q6UY11 383 aa16.85■□□□□ 0.29
SS18-219ENST00000581570 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
SS18-219ENST00000581570 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
SS18-219ENST00000581570 YDJCA8MPS7 323 aa16.84■□□□□ 0.29
SS18-219ENST00000581570 RGMBQ6NW40 437 aa16.84■□□□□ 0.29
SS18-219ENST00000581570 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
SS18-219ENST00000581570 MICALL2Q8IY33 904 aa16.84■□□□□ 0.29
SS18-219ENST00000581570 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
SS18-219ENST00000581570 HCLS1P14317 486 aaPredicted RBP16.83■□□□□ 0.28
SS18-219ENST00000581570 C2orf69Q8N8R5 385 aa16.83■□□□□ 0.28
SS18-219ENST00000581570 DPF2Q92785 391 aa16.83■□□□□ 0.28
SS18-219ENST00000581570 GBA2Q9HCG7 927 aaPredicted RBP16.83■□□□□ 0.28
SS18-219ENST00000581570 SAGE1Q9NXZ1 904 aa16.83■□□□□ 0.28
SS18-219ENST00000581570 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
SS18-219ENST00000581570 FAM155AB1AL88 458 aaPredicted RBP16.82■□□□□ 0.28
SS18-219ENST00000581570 SOX10P56693 466 aa16.82■□□□□ 0.28
SS18-219ENST00000581570 KIF23Q02241 960 aaPredicted RBP16.82■□□□□ 0.28
SS18-219ENST00000581570 GRAPQ13588 217 aa16.82■□□□□ 0.28
SS18-219ENST00000581570 SAMD7Q7Z3H4 446 aa16.82■□□□□ 0.28
SS18-219ENST00000581570 KRT26Q7Z3Y9 468 aa16.82■□□□□ 0.28
SS18-219ENST00000581570 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
SS18-219ENST00000581570 CCDC102AQ96A19 550 aa16.82■□□□□ 0.28
SS18-219ENST00000581570 EIF2S2P20042 333 aaKnown RBP16.81■□□□□ 0.28
SS18-219ENST00000581570 PDIA6Q15084 440 aa16.81■□□□□ 0.28
SS18-219ENST00000581570 LRP10Q7Z4F1 713 aa16.81■□□□□ 0.28
SS18-219ENST00000581570 PSMD14O00487 310 aa16.8■□□□□ 0.28
SS18-219ENST00000581570 TRPA1O75762 1119 aa16.8■□□□□ 0.28
SS18-219ENST00000581570 ZNF157P51786 506 aaPredicted RBP16.8■□□□□ 0.28
SS18-219ENST00000581570 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
SS18-219ENST00000581570 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
SS18-219ENST00000581570 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
SS18-219ENST00000581570 NLRP10Q86W26 655 aa16.8■□□□□ 0.28
SS18-219ENST00000581570 RNF186Q9NXI6 227 aa16.8■□□□□ 0.28
SS18-219ENST00000581570 ANXA1P04083 346 aa16.79■□□□□ 0.28
SS18-219ENST00000581570 WASHC4Q2M389 1173 aa16.79■□□□□ 0.28
SS18-219ENST00000581570 RBM26Q5T8P6 1007 aaKnown RBP16.79■□□□□ 0.28
SS18-219ENST00000581570 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
SS18-219ENST00000581570 DCPSQ96C86 337 aaKnown RBP16.79■□□□□ 0.28
SS18-219ENST00000581570 TRMT112Q9UI30 125 aaKnown RBP16.79■□□□□ 0.28
SS18-219ENST00000581570 TSPYL4Q9UJ04 414 aa16.79■□□□□ 0.28
SS18-219ENST00000581570 ADM5C9JUS6 153 aa16.78■□□□□ 0.28
SS18-219ENST00000581570 EGFRP00533 1210 aa16.78■□□□□ 0.28
SS18-219ENST00000581570 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
SS18-219ENST00000581570 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
SS18-219ENST00000581570 DBNDD1Q9H9R9 158 aa16.78■□□□□ 0.28
SS18-219ENST00000581570 KDM3BQ7LBC6 1761 aa16.78■□□□□ 0.28
SS18-219ENST00000581570 SH3TC1Q8TE82 1336 aa16.77■□□□□ 0.28
SS18-219ENST00000581570 RIMBP2O15034 1052 aa16.77■□□□□ 0.28
SS18-219ENST00000581570 RPS12P25398 132 aaKnown RBP16.77■□□□□ 0.28
SS18-219ENST00000581570 AIMP1Q12904 312 aaKnown RBP16.77■□□□□ 0.28
SS18-219ENST00000581570 TCIRG1Q13488 830 aa16.77■□□□□ 0.28
SS18-219ENST00000581570 COPS6Q7L5N1 327 aa16.77■□□□□ 0.28
SS18-219ENST00000581570 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.28
SS18-219ENST00000581570 C6orf229H3BNL8 230 aa16.76■□□□□ 0.27
SS18-219ENST00000581570 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
SS18-219ENST00000581570 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
SS18-219ENST00000581570 SLC10A3P09131 477 aa16.75■□□□□ 0.27
SS18-219ENST00000581570 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
SS18-219ENST00000581570 CTU1Q7Z7A3 348 aaKnown RBP16.75■□□□□ 0.27
SS18-219ENST00000581570 KCNQ5Q9NR82 932 aa16.75■□□□□ 0.27
SS18-219ENST00000581570 TNRC18O15417 2968 aaPredicted RBP16.74■□□□□ 0.27
SS18-219ENST00000581570 ECE2O60344 883 aa16.74■□□□□ 0.27
SS18-219ENST00000581570 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
SS18-219ENST00000581570 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
SS18-219ENST00000581570 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
SS18-219ENST00000581570 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
SS18-219ENST00000581570 POLLQ9UGP5 575 aa16.74■□□□□ 0.27
SS18-219ENST00000581570 MAPK8IP3Q9UPT6 1336 aa16.73■□□□□ 0.27
SS18-219ENST00000581570 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
SS18-219ENST00000581570 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
SS18-219ENST00000581570 CELF1Q92879 486 aaKnown RBP16.73■□□□□ 0.27
SS18-219ENST00000581570 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
SS18-219ENST00000581570 EYA3Q99504 573 aa16.73■□□□□ 0.27
SS18-219ENST00000581570 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
SS18-219ENST00000581570 GPSM2P81274 684 aa16.72■□□□□ 0.27
SS18-219ENST00000581570 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
SS18-219ENST00000581570 GGA3Q9NZ52 723 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms