RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-211ENST00000581536 GTF2E1P29083 439 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-211ENST00000581536 HDGFL1Q5TGJ6 251 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
TOP3A-211ENST00000581536 MASTLQ96GX5 879 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 GPBP1L1Q9HC44 474 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-211ENST00000581536 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
TOP3A-211ENST00000581536 C1QTNF8P60827 252 aa12.6□□□□□ -0.39
TOP3A-211ENST00000581536 STYK1Q6J9G0 422 aa12.6□□□□□ -0.39
TOP3A-211ENST00000581536 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
TOP3A-211ENST00000581536 SCUBE2Q9NQ36 999 aa12.6□□□□□ -0.39
TOP3A-211ENST00000581536 RNF181Q9P0P0 153 aa12.6□□□□□ -0.39
TOP3A-211ENST00000581536 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
TOP3A-211ENST00000581536 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
TOP3A-211ENST00000581536 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
TOP3A-211ENST00000581536 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
TOP3A-211ENST00000581536 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
TOP3A-211ENST00000581536 NFKBIEO00221 500 aa12.59□□□□□ -0.39
TOP3A-211ENST00000581536 NTSR2O95665 410 aa12.59□□□□□ -0.39
TOP3A-211ENST00000581536 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
TOP3A-211ENST00000581536 PRPF40BQ6NWY9 871 aaKnown RBP12.59□□□□□ -0.39
TOP3A-211ENST00000581536 C7orf43Q8WVR3 580 aa12.59□□□□□ -0.39
TOP3A-211ENST00000581536 CNKSR1Q969H4 720 aa12.59□□□□□ -0.39
TOP3A-211ENST00000581536 NYXQ9GZU5 481 aa12.59□□□□□ -0.39
TOP3A-211ENST00000581536 PHAXQ9H814 394 aaKnown RBP12.59□□□□□ -0.39
TOP3A-211ENST00000581536 ABCC12Q96J65 1359 aa12.58□□□□□ -0.4
TOP3A-211ENST00000581536 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
TOP3A-211ENST00000581536 NPR1P16066 1061 aa12.58□□□□□ -0.4
TOP3A-211ENST00000581536 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
TOP3A-211ENST00000581536 SLC51AQ86UW1 340 aa12.58□□□□□ -0.4
TOP3A-211ENST00000581536 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-211ENST00000581536 LAMB2P55268 1798 aa12.58□□□□□ -0.4
TOP3A-211ENST00000581536 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
TOP3A-211ENST00000581536 KIF3CO14782 793 aa12.57□□□□□ -0.4
TOP3A-211ENST00000581536 HOXB7P09629 217 aa12.57□□□□□ -0.4
TOP3A-211ENST00000581536 CALD1Q05682 793 aaKnown RBP12.57□□□□□ -0.4
TOP3A-211ENST00000581536 CCDC27Q2M243 656 aa12.57□□□□□ -0.4
TOP3A-211ENST00000581536 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
TOP3A-211ENST00000581536 NLRP10Q86W26 655 aa12.57□□□□□ -0.4
TOP3A-211ENST00000581536 UTP14AQ9BVJ6 771 aaKnown RBP12.57□□□□□ -0.4
TOP3A-211ENST00000581536 NMRK2Q9NPI5 230 aa12.57□□□□□ -0.4
TOP3A-211ENST00000581536 LMNB1P20700 586 aa12.56□□□□□ -0.4
TOP3A-211ENST00000581536 RRAGCQ9HB90 399 aa12.56□□□□□ -0.4
TOP3A-211ENST00000581536 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
TOP3A-211ENST00000581536 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
TOP3A-211ENST00000581536 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-211ENST00000581536 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
TOP3A-211ENST00000581536 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
TOP3A-211ENST00000581536 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
TOP3A-211ENST00000581536 PLBD2Q8NHP8 589 aa12.55□□□□□ -0.4
TOP3A-211ENST00000581536 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
TOP3A-211ENST00000581536 PARP10Q53GL7 1025 aa12.54□□□□□ -0.4
TOP3A-211ENST00000581536 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-211ENST00000581536 ISCA1Q9BUE6 129 aa12.54□□□□□ -0.4
TOP3A-211ENST00000581536 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
TOP3A-211ENST00000581536 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-211ENST00000581536 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
TOP3A-211ENST00000581536 G2E3Q7L622 706 aa12.53□□□□□ -0.4
TOP3A-211ENST00000581536 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
TOP3A-211ENST00000581536 JARID2Q92833 1246 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-211ENST00000581536 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
TOP3A-211ENST00000581536 OTUD5Q96G74 571 aa12.53□□□□□ -0.4
TOP3A-211ENST00000581536 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
TOP3A-211ENST00000581536 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
TOP3A-211ENST00000581536 DDX60Q8IY21 1712 aaKnown RBP12.53□□□□□ -0.4
TOP3A-211ENST00000581536 CEP350Q5VT06 3117 aa12.52□□□□□ -0.4
TOP3A-211ENST00000581536 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.41
TOP3A-211ENST00000581536 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-211ENST00000581536 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
TOP3A-211ENST00000581536 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
TOP3A-211ENST00000581536 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.41
TOP3A-211ENST00000581536 TAOK3Q9H2K8 898 aa12.52□□□□□ -0.41
TOP3A-211ENST00000581536 CACNA1FO60840 1977 aa12.51□□□□□ -0.41
TOP3A-211ENST00000581536 GLTPD2A6NH11 291 aa12.51□□□□□ -0.41
TOP3A-211ENST00000581536 POTECB2RU33 542 aa12.51□□□□□ -0.41
TOP3A-211ENST00000581536 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
TOP3A-211ENST00000581536 CCDC93Q567U6 631 aa12.51□□□□□ -0.41
TOP3A-211ENST00000581536 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
TOP3A-211ENST00000581536 MYD88Q99836 296 aa12.51□□□□□ -0.41
TOP3A-211ENST00000581536 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-211ENST00000581536 IL16Q14005 1332 aa12.51□□□□□ -0.41
TOP3A-211ENST00000581536 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-211ENST00000581536 VAMP4O75379 141 aa12.5□□□□□ -0.41
TOP3A-211ENST00000581536 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
TOP3A-211ENST00000581536 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
TOP3A-211ENST00000581536 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
TOP3A-211ENST00000581536 RIC1Q4ADV7 1423 aa12.49□□□□□ -0.41
TOP3A-211ENST00000581536 ABCC4O15439 1325 aa12.49□□□□□ -0.41
TOP3A-211ENST00000581536 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
TOP3A-211ENST00000581536 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
TOP3A-211ENST00000581536 DDNO94850 711 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-211ENST00000581536 SOGA3Q5TF21 947 aa12.49□□□□□ -0.41
TOP3A-211ENST00000581536 RTKN2Q8IZC4 609 aa12.49□□□□□ -0.41
TOP3A-211ENST00000581536 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
TOP3A-211ENST00000581536 MAP3K2Q9Y2U5 619 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms