RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 RIC1Q4ADV7 1423 aa11.42□□□□□ -0.58
CDK5RAP3-220ENST00000581160 ABCC12Q96J65 1359 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 IGHDP01880 384 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 PDE6BP35913 854 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 RFX5P48382 616 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 C3orf67Q6ZVT6 689 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
CDK5RAP3-220ENST00000581160 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 IFIT5Q13325 482 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CRY2Q49AN0 593 aa11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 GREM2Q9H772 168 aa11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 DCTPP1Q9H773 170 aa11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 SPON1Q9HCB6 807 aa11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 COPRSQ9NQ92 184 aa11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 DDX60Q8IY21 1712 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-220ENST00000581160 ITGA6P23229 1130 aa11.39□□□□□ -0.59
CDK5RAP3-220ENST00000581160 HOXA10P31260 410 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-220ENST00000581160 PTGER2P43116 358 aa11.39□□□□□ -0.59
CDK5RAP3-220ENST00000581160 PTPN12Q05209 780 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-220ENST00000581160 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CCDC85AQ96PX6 553 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-220ENST00000581160 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 DDX46Q7L014 1031 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 SEC31BQ9NQW1 1179 aa11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 MYH3P11055 1940 aa11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 LAMB2P55268 1798 aa11.38□□□□□ -0.59
CDK5RAP3-220ENST00000581160 H0YIN7 160 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 RAB11FIP3O75154 756 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 SURF6O75683 361 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 SRGNP10124 158 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 NPR1P16066 1061 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 G3BP1Q13283 466 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 C2CD5Q86YS7 1000 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 SMC5Q8IY18 1101 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CRAMP1Q96RY5 1269 aa11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-220ENST00000581160 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 EYA2O00167 538 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 BBOX1O75936 387 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CIAO1O76071 339 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 IGHMBP2P38935 993 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 TGFB2P61812 414 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 GRAPQ13588 217 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CENPQQ7L2Z9 268 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 ANKRD18AQ8IVF6 992 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 GRAPLQ8TC17 118 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 MASTLQ96GX5 879 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 ZNF594Q96JF6 807 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 PA2G4Q9UQ80 394 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CD2APQ9Y5K6 639 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
CDK5RAP3-220ENST00000581160 C10orf71Q711Q0 1435 aa11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 LDHAL6AQ6ZMR3 332 aa11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CELF1Q92879 486 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 MPHOSPH8Q99549 860 aa11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 BSDC1Q9NW68 430 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 EXOC6BQ9Y2D4 811 aa11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
CDK5RAP3-220ENST00000581160 TNRC6CQ9HCJ0 1690 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 IL15P40933 162 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 ZNF622Q969S3 477 aaKnown RBP eCLIP11.34□□□□□ -0.598e-13■■□□□ 12.8
CDK5RAP3-220ENST00000581160 SIL1Q9H173 461 aa11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 CNNM1Q9NRU3 951 aa11.34□□□□□ -0.59
CDK5RAP3-220ENST00000581160 SASH1O94885 1247 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 DPEP1P16444 411 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 KCNA3P22001 575 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 CHRNA5P30532 468 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 OS9Q13438 667 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 ANKRD45Q5TZF3 282 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 KIF1BPQ96EK5 621 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 MROH5Q6ZUA9 1318 aa11.33□□□□□ -0.6
CDK5RAP3-220ENST00000581160 KIF13BQ9NQT8 1826 aa11.32□□□□□ -0.6
CDK5RAP3-220ENST00000581160 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
CDK5RAP3-220ENST00000581160 NUCB1Q02818 461 aa11.32□□□□□ -0.6
CDK5RAP3-220ENST00000581160 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
CDK5RAP3-220ENST00000581160 LRRCC1Q9C099 1032 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms