RNA–Protein interactions for RNA: ENST00000581104.5

NUP85-216, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 2,233 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-216ENST00000581104 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
NUP85-216ENST00000581104 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
NUP85-216ENST00000581104 RPGRQ92834 1020 aaKnown RBP11.82□□□□□ -0.52
NUP85-216ENST00000581104 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
NUP85-216ENST00000581104 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
NUP85-216ENST00000581104 KLRG2A4D1S0 409 aaPredicted RBP11.82□□□□□ -0.52
NUP85-216ENST00000581104 IGHDP01880 384 aa11.82□□□□□ -0.52
NUP85-216ENST00000581104 CHRNA5P30532 468 aa11.82□□□□□ -0.52
NUP85-216ENST00000581104 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
NUP85-216ENST00000581104 DPEP1P16444 411 aa11.81□□□□□ -0.52
NUP85-216ENST00000581104 SF3B3Q15393 1217 aaKnown RBP11.81□□□□□ -0.52
NUP85-216ENST00000581104 CRY2Q49AN0 593 aa11.81□□□□□ -0.52
NUP85-216ENST00000581104 CCDC152Q4G0S7 254 aa11.81□□□□□ -0.52
NUP85-216ENST00000581104 SYT17Q9BSW7 474 aa11.81□□□□□ -0.52
NUP85-216ENST00000581104 LRRFIP2Q9Y608 721 aaKnown RBP11.81□□□□□ -0.52
NUP85-216ENST00000581104 MYH3P11055 1940 aa11.81□□□□□ -0.52
NUP85-216ENST00000581104 GNAI2P04899 355 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 SRGNP10124 158 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 NPR1P16066 1061 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 FOXO4P98177 505 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 NLGN2Q8NFZ4 835 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 ZNF622Q969S3 477 aaKnown RBP eCLIP11.8□□□□□ -0.521e-7■■□□□ 12.1
NUP85-216ENST00000581104 MASTLQ96GX5 879 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
NUP85-216ENST00000581104 ZBTB40Q9NUA8 1239 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 CHMP3Q9Y3E7 222 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 COL11A2P13942 1736 aaPredicted RBP11.8□□□□□ -0.52
NUP85-216ENST00000581104 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
NUP85-216ENST00000581104 TTLL11Q8NHH1 800 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 RBM17Q96I25 401 aaKnown RBP11.8□□□□□ -0.52
NUP85-216ENST00000581104 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
NUP85-216ENST00000581104 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
NUP85-216ENST00000581104 STYK1Q6J9G0 422 aa11.79□□□□□ -0.52
NUP85-216ENST00000581104 LMBR1LQ6UX01 489 aa11.79□□□□□ -0.52
NUP85-216ENST00000581104 KAZALD1Q96I82 304 aa11.79□□□□□ -0.52
NUP85-216ENST00000581104 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
NUP85-216ENST00000581104 CSF1RP07333 972 aa11.79□□□□□ -0.52
NUP85-216ENST00000581104 PIM2Q9P1W9 311 aa11.79□□□□□ -0.52
NUP85-216ENST00000581104 ALDH1B1P30837 517 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
NUP85-216ENST00000581104 ANKRD44Q8N8A2 993 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 CNKSR1Q969H4 720 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 CRAMP1Q96RY5 1269 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 GREM2Q9H772 168 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 C1orf115Q9H7X2 142 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 KDM2BQ8NHM5 1336 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 KCNA3P22001 575 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
NUP85-216ENST00000581104 RABL6Q3YEC7 729 aaPredicted RBP11.78□□□□□ -0.52
NUP85-216ENST00000581104 ITGA6P23229 1130 aa11.77□□□□□ -0.53
NUP85-216ENST00000581104 IFIT5Q13325 482 aaKnown RBP11.77□□□□□ -0.53
NUP85-216ENST00000581104 CCDC57Q2TAC2 916 aa11.77□□□□□ -0.53
NUP85-216ENST00000581104 TTLL6Q8N841 843 aa11.77□□□□□ -0.53
NUP85-216ENST00000581104 SEC31BQ9NQW1 1179 aa11.77□□□□□ -0.53
NUP85-216ENST00000581104 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.53
NUP85-216ENST00000581104 RTL9Q8NET4 1388 aa11.77□□□□□ -0.53
NUP85-216ENST00000581104 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
NUP85-216ENST00000581104 GRAPQ13588 217 aa11.76□□□□□ -0.53
NUP85-216ENST00000581104 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
NUP85-216ENST00000581104 CDC5LQ99459 802 aaKnown RBP11.76□□□□□ -0.53
NUP85-216ENST00000581104 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
NUP85-216ENST00000581104 TAF7LQ5H9L4 462 aa11.76□□□□□ -0.53
NUP85-216ENST00000581104 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
NUP85-216ENST00000581104 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
NUP85-216ENST00000581104 ANKRD18AQ8IVF6 992 aa11.75□□□□□ -0.53
NUP85-216ENST00000581104 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
NUP85-216ENST00000581104 BCS1LQ9Y276 419 aa11.75□□□□□ -0.53
NUP85-216ENST00000581104 BRCA1P38398 1863 aaKnown RBP11.75□□□□□ -0.53
NUP85-216ENST00000581104 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
NUP85-216ENST00000581104 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
NUP85-216ENST00000581104 BBOX1O75936 387 aa11.75□□□□□ -0.53
NUP85-216ENST00000581104 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
NUP85-216ENST00000581104 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
NUP85-216ENST00000581104 TAF1P21675 1872 aa11.74□□□□□ -0.53
NUP85-216ENST00000581104 MTX1Q13505 466 aa11.74□□□□□ -0.53
NUP85-216ENST00000581104 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
NUP85-216ENST00000581104 CEP85Q6P2H3 762 aa11.74□□□□□ -0.53
NUP85-216ENST00000581104 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
NUP85-216ENST00000581104 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
NUP85-216ENST00000581104 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
NUP85-216ENST00000581104 TMX4Q9H1E5 349 aaPredicted RBP11.74□□□□□ -0.53
NUP85-216ENST00000581104 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
NUP85-216ENST00000581104 SLX4Q8IY92 1834 aa11.73□□□□□ -0.53
NUP85-216ENST00000581104 RPAP2Q8IXW5 612 aaPredicted RBP11.73□□□□□ -0.53
NUP85-216ENST00000581104 ZNF594Q96JF6 807 aaPredicted RBP11.73□□□□□ -0.53
NUP85-216ENST00000581104 SPEF2Q9C093 1822 aa11.73□□□□□ -0.53
NUP85-216ENST00000581104 COL4A1P02462 1669 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 PNMA6EA0A0J9YXQ4 647 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 C21orf2O43822 256 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 HMMRO75330 724 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 RFX5P48382 616 aaPredicted RBP11.72□□□□□ -0.53
NUP85-216ENST00000581104 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 CNNM1Q9NRU3 951 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
NUP85-216ENST00000581104 ATP6V0A2Q9Y487 856 aa11.72□□□□□ -0.53
NUP85-216ENST00000581104 GPR162Q16538 588 aa11.71□□□□□ -0.53
NUP85-216ENST00000581104 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
NUP85-216ENST00000581104 SP8Q8IXZ3 490 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms