RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CEP290O15078 2479 aa19.11■□□□□ 0.65
CSNK1D-213ENST00000580446 ATP6V0A2Q9Y487 856 aa19.1■□□□□ 0.65
CSNK1D-213ENST00000580446 KIF7Q2M1P5 1343 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 UBN2Q6ZU65 1347 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 BTBD11A6QL63 1104 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 PSMD14O00487 310 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 FKTNO75072 461 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 KIAA2012Q0VF49 1180 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 GRIPAP1Q4V328 841 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 CHRDL2Q6WN34 429 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 PANK3Q9H999 370 aa19.09■□□□□ 0.65
CSNK1D-213ENST00000580446 UBE2Q2LH0YL09 131 aa19.08■□□□□ 0.64
CSNK1D-213ENST00000580446 SUSD4Q5VX71 490 aa19.08■□□□□ 0.64
CSNK1D-213ENST00000580446 RTFDC1Q9BY42 306 aaPredicted RBP19.08■□□□□ 0.64
CSNK1D-213ENST00000580446 NYXQ9GZU5 481 aa19.08■□□□□ 0.64
CSNK1D-213ENST00000580446 TMX4Q9H1E5 349 aaPredicted RBP19.08■□□□□ 0.64
CSNK1D-213ENST00000580446 KCNQ5Q9NR82 932 aa19.08■□□□□ 0.64
CSNK1D-213ENST00000580446 TRIM17Q9Y577 477 aa19.08■□□□□ 0.64
CSNK1D-213ENST00000580446 ABCC4O15439 1325 aa19.07■□□□□ 0.64
CSNK1D-213ENST00000580446 PAPPA2Q9BXP8 1791 aa19.07■□□□□ 0.64
CSNK1D-213ENST00000580446 SULF1Q8IWU6 871 aa19.07■□□□□ 0.64
CSNK1D-213ENST00000580446 SUPT20HQ8NEM7 779 aa19.07■□□□□ 0.64
CSNK1D-213ENST00000580446 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
CSNK1D-213ENST00000580446 GNAT3A8MTJ3 354 aa19.06■□□□□ 0.64
CSNK1D-213ENST00000580446 MPNDQ8N594 471 aa19.06■□□□□ 0.64
CSNK1D-213ENST00000580446 DBNDD1Q9H9R9 158 aa19.06■□□□□ 0.64
CSNK1D-213ENST00000580446 KIF4BQ2VIQ3 1234 aa19.05■□□□□ 0.64
CSNK1D-213ENST00000580446 PRAMEF18Q5VWM3 479 aa19.05■□□□□ 0.64
CSNK1D-213ENST00000580446 REM2Q8IYK8 340 aaPredicted RBP19.05■□□□□ 0.64
CSNK1D-213ENST00000580446 OTOP1Q7RTM1 612 aa19.04■□□□□ 0.64
CSNK1D-213ENST00000580446 VPS33BQ9H267 617 aa19.04■□□□□ 0.64
CSNK1D-213ENST00000580446 RBM27Q9P2N5 1060 aaKnown RBP19.04■□□□□ 0.64
CSNK1D-213ENST00000580446 SIPA1L3O60292 1781 aaPredicted RBP19.04■□□□□ 0.64
CSNK1D-213ENST00000580446 MYCP01106 439 aaPredicted RBP19.03■□□□□ 0.64
CSNK1D-213ENST00000580446 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
CSNK1D-213ENST00000580446 TTLL7Q6ZT98 887 aa19.03■□□□□ 0.64
CSNK1D-213ENST00000580446 ZBTB3Q9H5J0 574 aa19.03■□□□□ 0.64
CSNK1D-213ENST00000580446 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
CSNK1D-213ENST00000580446 RIMBP2O15034 1052 aa19.02■□□□□ 0.64
CSNK1D-213ENST00000580446 NTSR2O95665 410 aa19.02■□□□□ 0.64
CSNK1D-213ENST00000580446 ANGEL2Q5VTE6 544 aaKnown RBP19.02■□□□□ 0.64
CSNK1D-213ENST00000580446 DPF2Q92785 391 aa19.02■□□□□ 0.64
CSNK1D-213ENST00000580446 INTS3Q68E01 1043 aaKnown RBP19.01■□□□□ 0.63
CSNK1D-213ENST00000580446 RTL9Q8NET4 1388 aa19.01■□□□□ 0.63
CSNK1D-213ENST00000580446 RANBP2P49792 3224 aaKnown RBP19.01■□□□□ 0.63
CSNK1D-213ENST00000580446 KIAA0100Q14667 2235 aaKnown RBP19■□□□□ 0.63
CSNK1D-213ENST00000580446 TM4SF4P48230 202 aa19■□□□□ 0.63
CSNK1D-213ENST00000580446 DOK7Q18PE1 504 aa19■□□□□ 0.63
CSNK1D-213ENST00000580446 DUOX1Q9NRD9 1551 aa19■□□□□ 0.63
CSNK1D-213ENST00000580446 POLR2AP24928 1970 aaKnown RBP19■□□□□ 0.63
CSNK1D-213ENST00000580446 COL6A3P12111 3177 aa19■□□□□ 0.63
CSNK1D-213ENST00000580446 BRCA2P51587 3418 aa19■□□□□ 0.63
CSNK1D-213ENST00000580446 CENPFP49454 3210 aa18.99■□□□□ 0.63
CSNK1D-213ENST00000580446 TTLL12Q14166 644 aaPredicted RBP18.99■□□□□ 0.63
CSNK1D-213ENST00000580446 ZNF428Q96B54 188 aa18.99■□□□□ 0.63
CSNK1D-213ENST00000580446 SCARF1Q14162 830 aa18.98■□□□□ 0.63
CSNK1D-213ENST00000580446 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-213ENST00000580446 SP8Q8IXZ3 490 aa18.98■□□□□ 0.63
CSNK1D-213ENST00000580446 NLRP3Q96P20 1036 aa18.98■□□□□ 0.63
CSNK1D-213ENST00000580446 MAP3K15Q6ZN16 1313 aa18.98■□□□□ 0.63
CSNK1D-213ENST00000580446 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
CSNK1D-213ENST00000580446 RGL2O15211 777 aa18.97■□□□□ 0.63
CSNK1D-213ENST00000580446 CAP1Q01518 475 aa18.97■□□□□ 0.63
CSNK1D-213ENST00000580446 GAS2L2Q8NHY3 880 aa18.97■□□□□ 0.63
CSNK1D-213ENST00000580446 CD99L2Q8TCZ2 262 aa18.97■□□□□ 0.63
CSNK1D-213ENST00000580446 PTPN22Q9Y2R2 807 aa18.97■□□□□ 0.63
CSNK1D-213ENST00000580446 U2SURPO15042 1029 aaKnown RBP18.96■□□□□ 0.63
CSNK1D-213ENST00000580446 DIAPH1O60610 1272 aaKnown RBP18.96■□□□□ 0.63
CSNK1D-213ENST00000580446 PRKG1Q13976 671 aa18.96■□□□□ 0.63
CSNK1D-213ENST00000580446 MCM10Q7L590 875 aa18.96■□□□□ 0.63
CSNK1D-213ENST00000580446 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
CSNK1D-213ENST00000580446 ECE2O60344 883 aa18.95■□□□□ 0.62
CSNK1D-213ENST00000580446 HCLS1P14317 486 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-213ENST00000580446 MYL6BP14649 208 aa18.95■□□□□ 0.62
CSNK1D-213ENST00000580446 WASHC4Q2M389 1173 aa18.95■□□□□ 0.62
CSNK1D-213ENST00000580446 ARMC5Q96C12 935 aa18.95■□□□□ 0.62
CSNK1D-213ENST00000580446 KIF6Q6ZMV9 814 aa18.94■□□□□ 0.62
CSNK1D-213ENST00000580446 ZNF34Q8IZ26 560 aa18.94■□□□□ 0.62
CSNK1D-213ENST00000580446 PHACTR3Q96KR7 559 aa18.94■□□□□ 0.62
CSNK1D-213ENST00000580446 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
CSNK1D-213ENST00000580446 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 ERVV-1B6SEH8 477 aa18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 SOX1O00570 391 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 RPS12P25398 132 aaKnown RBP18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 FKBP1BP68106 108 aa18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 SREBF2Q12772 1141 aa18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 TMEM106CQ9BVX2 250 aa18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 FZD1Q9UP38 647 aa18.93■□□□□ 0.62
CSNK1D-213ENST00000580446 BBOX1O75936 387 aa18.92■□□□□ 0.62
CSNK1D-213ENST00000580446 LRCH3Q96II8 777 aa18.92■□□□□ 0.62
CSNK1D-213ENST00000580446 C6orf229H3BNL8 230 aa18.91■□□□□ 0.62
CSNK1D-213ENST00000580446 MNX1P50219 401 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-213ENST00000580446 PTPN12Q05209 780 aaKnown RBP18.91■□□□□ 0.62
CSNK1D-213ENST00000580446 CFHR5Q9BXR6 569 aa18.91■□□□□ 0.62
CSNK1D-213ENST00000580446 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
CSNK1D-213ENST00000580446 SLC4A8Q2Y0W8 1093 aa18.9■□□□□ 0.62
CSNK1D-213ENST00000580446 POLLQ9UGP5 575 aa18.9■□□□□ 0.62
CSNK1D-213ENST00000580446 NSFL1CQ9UNZ2 370 aaKnown RBP18.9■□□□□ 0.62
CSNK1D-213ENST00000580446 ZNF609O15014 1411 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms