RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 EGFRP00533 1210 aa25.55■■□□□ 1.68
LIMD2-209ENST00000580222 KIF23Q02241 960 aaPredicted RBP25.55■■□□□ 1.68
LIMD2-209ENST00000580222 KIAA2012Q0VF49 1180 aa25.55■■□□□ 1.68
LIMD2-209ENST00000580222 ZBTB12Q9Y330 459 aaPredicted RBP25.55■■□□□ 1.68
LIMD2-209ENST00000580222 HTATSF1O43719 755 aaKnown RBP25.54■■□□□ 1.68
LIMD2-209ENST00000580222 SLC10A5Q5PT55 438 aa25.54■■□□□ 1.68
LIMD2-209ENST00000580222 DPP8Q6V1X1 898 aaPredicted RBP25.54■■□□□ 1.68
LIMD2-209ENST00000580222 NLRP3Q96P20 1036 aa25.54■■□□□ 1.68
LIMD2-209ENST00000580222 PRKRIP1Q9H875 184 aaPredicted RBP25.54■■□□□ 1.68
LIMD2-209ENST00000580222 RNF186Q9NXI6 227 aa25.54■■□□□ 1.68
LIMD2-209ENST00000580222 EIF4A1P60842 406 aaKnown RBP25.53■■□□□ 1.68
LIMD2-209ENST00000580222 RGMBQ6NW40 437 aa25.53■■□□□ 1.68
LIMD2-209ENST00000580222 GIGYF2Q6Y7W6 1299 aaKnown RBP25.53■■□□□ 1.68
LIMD2-209ENST00000580222 SAMD7Q7Z3H4 446 aa25.53■■□□□ 1.68
LIMD2-209ENST00000580222 MICALL2Q8IY33 904 aa25.53■■□□□ 1.68
LIMD2-209ENST00000580222 CDHR2Q9BYE9 1310 aa25.53■■□□□ 1.68
LIMD2-209ENST00000580222 NUP98P52948 1817 aa25.52■■□□□ 1.68
LIMD2-209ENST00000580222 TRPA1O75762 1119 aa25.52■■□□□ 1.68
LIMD2-209ENST00000580222 PPP2R1AP30153 589 aa25.52■■□□□ 1.68
LIMD2-209ENST00000580222 TNIP1Q15025 636 aa25.52■■□□□ 1.68
LIMD2-209ENST00000580222 SP8Q8IXZ3 490 aa25.52■■□□□ 1.68
LIMD2-209ENST00000580222 MPNDQ8N594 471 aa25.52■■□□□ 1.68
LIMD2-209ENST00000580222 SUPT20HQ8NEM7 779 aa25.52■■□□□ 1.68
LIMD2-209ENST00000580222 DIEXFQ68CQ4 756 aaKnown RBP25.5■■□□□ 1.67
LIMD2-209ENST00000580222 LRP10Q7Z4F1 713 aa25.5■■□□□ 1.67
LIMD2-209ENST00000580222 CFAP53Q96M91 514 aa25.5■■□□□ 1.67
LIMD2-209ENST00000580222 MYBBP1AQ9BQG0 1328 aaKnown RBP25.5■■□□□ 1.67
LIMD2-209ENST00000580222 THUMPD2Q9BTF0 503 aaKnown RBP25.5■■□□□ 1.67
LIMD2-209ENST00000580222 TMX4Q9H1E5 349 aaPredicted RBP25.5■■□□□ 1.67
LIMD2-209ENST00000580222 SAGE1Q9NXZ1 904 aa25.5■■□□□ 1.67
LIMD2-209ENST00000580222 ADM5C9JUS6 153 aa25.49■■□□□ 1.67
LIMD2-209ENST00000580222 BBOX1O75936 387 aa25.49■■□□□ 1.67
LIMD2-209ENST00000580222 TBC1D10BQ4KMP7 808 aaPredicted RBP25.49■■□□□ 1.67
LIMD2-209ENST00000580222 PRPF38BQ5VTL8 546 aaKnown RBP25.49■■□□□ 1.67
LIMD2-209ENST00000580222 PPP1R42Q7Z4L9 355 aa25.49■■□□□ 1.67
LIMD2-209ENST00000580222 GBA2Q9HCG7 927 aaPredicted RBP25.49■■□□□ 1.67
LIMD2-209ENST00000580222 NUDCQ9Y266 331 aa25.49■■□□□ 1.67
LIMD2-209ENST00000580222 H7C1D1 291 aa25.48■■□□□ 1.67
LIMD2-209ENST00000580222 HCLS1P14317 486 aaPredicted RBP25.48■■□□□ 1.67
LIMD2-209ENST00000580222 KRT26Q7Z3Y9 468 aa25.48■■□□□ 1.67
LIMD2-209ENST00000580222 CSRNP1Q96S65 589 aa25.48■■□□□ 1.67
LIMD2-209ENST00000580222 UTP14AQ9BVJ6 771 aaKnown RBP25.48■■□□□ 1.67
LIMD2-209ENST00000580222 PARP10Q53GL7 1025 aa25.47■■□□□ 1.67
LIMD2-209ENST00000580222 KCNQ5Q9NR82 932 aa25.47■■□□□ 1.67
LIMD2-209ENST00000580222 LAMB4A4D0S4 1761 aa25.46■■□□□ 1.67
LIMD2-209ENST00000580222 PSMD14O00487 310 aa25.46■■□□□ 1.67
LIMD2-209ENST00000580222 ZNF157P51786 506 aaPredicted RBP25.46■■□□□ 1.67
LIMD2-209ENST00000580222 PDIA6Q15084 440 aa25.46■■□□□ 1.67
LIMD2-209ENST00000580222 PROSER3Q2NL68 480 aa25.45■■□□□ 1.66
LIMD2-209ENST00000580222 DPF2Q92785 391 aa25.45■■□□□ 1.66
LIMD2-209ENST00000580222 CCDC102AQ96A19 550 aa25.45■■□□□ 1.66
LIMD2-209ENST00000580222 ANXA1P04083 346 aa25.44■■□□□ 1.66
LIMD2-209ENST00000580222 RBM26Q5T8P6 1007 aaKnown RBP25.44■■□□□ 1.66
LIMD2-209ENST00000580222 C2orf69Q8N8R5 385 aa25.44■■□□□ 1.66
LIMD2-209ENST00000580222 DUOX1Q9NRD9 1551 aa25.44■■□□□ 1.66
LIMD2-209ENST00000580222 ASTN2O75129 1339 aaPredicted RBP25.43■■□□□ 1.66
LIMD2-209ENST00000580222 CTU1Q7Z7A3 348 aaKnown RBP25.43■■□□□ 1.66
LIMD2-209ENST00000580222 ZNF428Q96B54 188 aa25.43■■□□□ 1.66
LIMD2-209ENST00000580222 SLC10A3P09131 477 aa25.42■■□□□ 1.66
LIMD2-209ENST00000580222 PNISRQ8TF01 805 aaKnown RBP25.42■■□□□ 1.66
LIMD2-209ENST00000580222 DBNDD1Q9H9R9 158 aa25.42■■□□□ 1.66
LIMD2-209ENST00000580222 HPS5Q9UPZ3 1129 aa25.42■■□□□ 1.66
LIMD2-209ENST00000580222 GRAPQ13588 217 aa25.41■■□□□ 1.66
LIMD2-209ENST00000580222 GRAPLQ8TC17 118 aaPredicted RBP25.41■■□□□ 1.66
LIMD2-209ENST00000580222 NLRP10Q86W26 655 aa25.4■■□□□ 1.66
LIMD2-209ENST00000580222 RIMBP2O15034 1052 aa25.39■■□□□ 1.66
LIMD2-209ENST00000580222 DDX46Q7L014 1031 aaKnown RBP25.39■■□□□ 1.66
LIMD2-209ENST00000580222 RTL9Q8NET4 1388 aa25.39■■□□□ 1.65
LIMD2-209ENST00000580222 KDM3BQ7LBC6 1761 aa25.39■■□□□ 1.65
LIMD2-209ENST00000580222 DCPSQ96C86 337 aaKnown RBP25.38■■□□□ 1.65
LIMD2-209ENST00000580222 EIF2S2P20042 333 aaKnown RBP25.37■■□□□ 1.65
LIMD2-209ENST00000580222 DOK7Q18PE1 504 aa25.37■■□□□ 1.65
LIMD2-209ENST00000580222 WASHC4Q2M389 1173 aa25.37■■□□□ 1.65
LIMD2-209ENST00000580222 POLLQ9UGP5 575 aa25.37■■□□□ 1.65
LIMD2-209ENST00000580222 ERBB4Q15303 1308 aa25.37■■□□□ 1.65
LIMD2-209ENST00000580222 RASAL3Q86YV0 1011 aa25.35■■□□□ 1.65
LIMD2-209ENST00000580222 CDCA5Q96FF9 252 aa25.35■■□□□ 1.65
LIMD2-209ENST00000580222 GGA3Q9NZ52 723 aa25.35■■□□□ 1.65
LIMD2-209ENST00000580222 TRMT112Q9UI30 125 aaKnown RBP25.35■■□□□ 1.65
LIMD2-209ENST00000580222 CELF1Q92879 486 aaKnown RBP25.34■■□□□ 1.65
LIMD2-209ENST00000580222 PLEKHF1Q96S99 279 aa25.34■■□□□ 1.65
LIMD2-209ENST00000580222 NSFL1CQ9UNZ2 370 aaKnown RBP25.34■■□□□ 1.65
LIMD2-209ENST00000580222 COL4A1P02462 1669 aa25.33■■□□□ 1.65
LIMD2-209ENST00000580222 GPSM2P81274 684 aa25.33■■□□□ 1.65
LIMD2-209ENST00000580222 KIF4BQ2VIQ3 1234 aa25.33■■□□□ 1.65
LIMD2-209ENST00000580222 COPS6Q7L5N1 327 aa25.33■■□□□ 1.65
LIMD2-209ENST00000580222 TAF1P21675 1872 aa25.32■■□□□ 1.64
LIMD2-209ENST00000580222 LAMB2P55268 1798 aa25.32■■□□□ 1.64
LIMD2-209ENST00000580222 ECE2O60344 883 aa25.32■■□□□ 1.64
LIMD2-209ENST00000580222 RPS12P25398 132 aaKnown RBP25.32■■□□□ 1.64
LIMD2-209ENST00000580222 AIMP1Q12904 312 aaKnown RBP25.32■■□□□ 1.64
LIMD2-209ENST00000580222 MOB2Q70IA6 237 aa25.32■■□□□ 1.64
LIMD2-209ENST00000580222 XAGE3Q8WTP9 111 aa25.32■■□□□ 1.64
LIMD2-209ENST00000580222 C6orf229H3BNL8 230 aa25.31■■□□□ 1.64
LIMD2-209ENST00000580222 TBC1D8O95759 1140 aa25.31■■□□□ 1.64
LIMD2-209ENST00000580222 TCIRG1Q13488 830 aa25.31■■□□□ 1.64
LIMD2-209ENST00000580222 NFE2L2Q16236 605 aa25.31■■□□□ 1.64
LIMD2-209ENST00000580222 SULF1Q8IWU6 871 aa25.31■■□□□ 1.64
LIMD2-209ENST00000580222 ZNF296Q8WUU4 475 aaPredicted RBP25.31■■□□□ 1.64
LIMD2-209ENST00000580222 NECTIN2Q92692 538 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms