RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 CABP4P57796 275 aa9.28□□□□□ -0.92
RNF43-204ENST00000580014 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
RNF43-204ENST00000580014 TEFQ10587 303 aa9.28□□□□□ -0.92
RNF43-204ENST00000580014 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
RNF43-204ENST00000580014 PIGBQ92521 554 aa9.28□□□□□ -0.92
RNF43-204ENST00000580014 MYH16Q9H6N6 1097 aa9.28□□□□□ -0.92
RNF43-204ENST00000580014 PRM3Q9NNZ6 103 aa9.28□□□□□ -0.92
RNF43-204ENST00000580014 DLG5Q8TDM6 1919 aa9.28□□□□□ -0.92
RNF43-204ENST00000580014 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.92
RNF43-204ENST00000580014 A0A0G2JS52 829 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 ATP6V1AP38606 617 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 MYT1Q01538 1121 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 ADGRD1Q6QNK2 874 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 MBIPQ9NS73 344 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 TOGARAM1Q9Y4F4 1720 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 FANCIQ9NVI1 1328 aa9.27□□□□□ -0.93
RNF43-204ENST00000580014 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
RNF43-204ENST00000580014 KCNQ2O43526 872 aa9.26□□□□□ -0.93
RNF43-204ENST00000580014 EIF4A1P60842 406 aaKnown RBP9.26□□□□□ -0.93
RNF43-204ENST00000580014 ZNF790Q6PG37 636 aa9.26□□□□□ -0.93
RNF43-204ENST00000580014 CCDC82Q8N4S0 544 aa9.26□□□□□ -0.93
RNF43-204ENST00000580014 LRCH3Q96II8 777 aa9.26□□□□□ -0.93
RNF43-204ENST00000580014 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
RNF43-204ENST00000580014 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
RNF43-204ENST00000580014 TMOD3Q9NYL9 352 aa9.26□□□□□ -0.93
RNF43-204ENST00000580014 SIPA1L3O60292 1781 aaPredicted RBP9.26□□□□□ -0.93
RNF43-204ENST00000580014 SOS1Q07889 1333 aaPredicted RBP9.26□□□□□ -0.93
RNF43-204ENST00000580014 KCNQ3O43525 872 aa9.25□□□□□ -0.93
RNF43-204ENST00000580014 CT47B1P0C2W7 299 aaPredicted RBP9.25□□□□□ -0.93
RNF43-204ENST00000580014 FAM182BQ5T319 152 aa9.25□□□□□ -0.93
RNF43-204ENST00000580014 ZNF330Q9Y3S2 320 aaPredicted RBP9.25□□□□□ -0.93
RNF43-204ENST00000580014 BRWD3Q6RI45 1802 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 HRO43593 1189 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 ACTN4O43707 911 aaKnown RBP9.24□□□□□ -0.93
RNF43-204ENST00000580014 HOXB7P09629 217 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 PTF1AQ7RTS3 328 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 HELBQ8NG08 1087 aaPredicted RBP9.24□□□□□ -0.93
RNF43-204ENST00000580014 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
RNF43-204ENST00000580014 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
RNF43-204ENST00000580014 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
RNF43-204ENST00000580014 MIS18AQ9NYP9 233 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 TSPYL4Q9UJ04 414 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
RNF43-204ENST00000580014 KCPQ6ZWJ8 1503 aa9.23□□□□□ -0.93
RNF43-204ENST00000580014 EXOSC9Q06265 439 aaKnown RBP9.23□□□□□ -0.93
RNF43-204ENST00000580014 SLC39A6Q13433 755 aa9.23□□□□□ -0.93
RNF43-204ENST00000580014 C8orf58Q8NAV2 365 aa9.23□□□□□ -0.93
RNF43-204ENST00000580014 ZNF428Q96B54 188 aa9.23□□□□□ -0.93
RNF43-204ENST00000580014 ZNF496Q96IT1 587 aaPredicted RBP9.23□□□□□ -0.93
RNF43-204ENST00000580014 TBC1D2BQ9UPU7 963 aa9.23□□□□□ -0.93
RNF43-204ENST00000580014 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
RNF43-204ENST00000580014 NHSQ6T4R5 1651 aa9.23□□□□□ -0.93
RNF43-204ENST00000580014 KDM3BQ7LBC6 1761 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 CFAP99D6REC4 459 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 PLSCR1O15162 318 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 VAMP4O75379 141 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 GIGYF1O75420 1035 aaPredicted RBP9.22□□□□□ -0.93
RNF43-204ENST00000580014 ABL2P42684 1182 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 CTDSPL2Q05D32 466 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 MORN1Q5T089 497 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
RNF43-204ENST00000580014 FMNL2Q96PY5 1086 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 PRR14Q9BWN1 585 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 LAS1LQ9Y4W2 734 aaKnown RBP9.22□□□□□ -0.93
RNF43-204ENST00000580014 NDUFB9Q9Y6M9 179 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 DOT1LQ8TEK3 1739 aa9.22□□□□□ -0.93
RNF43-204ENST00000580014 SNRPA1P09661 255 aaKnown RBP9.21□□□□□ -0.94
RNF43-204ENST00000580014 TTC5Q8N0Z6 440 aa9.21□□□□□ -0.94
RNF43-204ENST00000580014 TSPYL6Q8N831 410 aa9.21□□□□□ -0.94
RNF43-204ENST00000580014 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.94
RNF43-204ENST00000580014 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
RNF43-204ENST00000580014 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
RNF43-204ENST00000580014 ITGB4P16144 1822 aa9.21□□□□□ -0.94
RNF43-204ENST00000580014 PALLDQ8WX93 1383 aa9.21□□□□□ -0.94
RNF43-204ENST00000580014 UBR2Q8IWV8 1755 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 SBF2Q86WG5 1849 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 TRIM37O94972 964 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 TWISTNBQ3B726 338 aaPredicted RBP9.2□□□□□ -0.94
RNF43-204ENST00000580014 CCDC125Q86Z20 511 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 TSC1Q92574 1164 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 SYTL4Q96C24 671 aaPredicted RBP9.2□□□□□ -0.94
RNF43-204ENST00000580014 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
RNF43-204ENST00000580014 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 HMX1Q9NP08 348 aaPredicted RBP9.2□□□□□ -0.94
RNF43-204ENST00000580014 CICQ96RK0 1608 aaPredicted RBP9.2□□□□□ -0.94
RNF43-204ENST00000580014 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
RNF43-204ENST00000580014 LOC102724428A0A0B4J2F2 783 aa9.19□□□□□ -0.94
RNF43-204ENST00000580014 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
RNF43-204ENST00000580014 SIK1P57059 783 aa9.19□□□□□ -0.94
RNF43-204ENST00000580014 Q3C1V9 767 aa9.19□□□□□ -0.94
RNF43-204ENST00000580014 ALDH1L2Q3SY69 923 aa9.19□□□□□ -0.94
RNF43-204ENST00000580014 RETREG3Q86VR2 466 aa9.19□□□□□ -0.94
RNF43-204ENST00000580014 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
RNF43-204ENST00000580014 SYMPKQ92797 1274 aaKnown RBP9.19□□□□□ -0.94
RNF43-204ENST00000580014 TRIM34Q9BYJ4 488 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms