RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 STX8Q9UNK0 236 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 MAGEB6P1A0A0J9YX57 407 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 PICK1Q9NRD5 415 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 SLC4A4Q9Y6R1 1079 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 TBC1D22AQ8WUA7 517 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 LRRC27Q9C0I9 530 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 ABCA9Q8IUA7 1624 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 FIBPO43427 364 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 CCAR2Q8N163 923 aaKnown RBP11.88□□□□□ -0.51
MSI2-209ENST00000579483 TANGO6Q9C0B7 1094 aa11.88□□□□□ -0.51
MSI2-209ENST00000579483 ZNF335Q9H4Z2 1342 aaPredicted RBP11.88□□□□□ -0.51
MSI2-209ENST00000579483 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
MSI2-209ENST00000579483 CCDC150Q8NCX0 1101 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 MBD5Q9P267 1494 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 CCP110O43303 1012 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
MSI2-209ENST00000579483 METTL22Q9BUU2 404 aaPredicted RBP11.87□□□□□ -0.51
MSI2-209ENST00000579483 RSPH6AQ9H0K4 717 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 FGFR1OPO95684 399 aaKnown RBP11.87□□□□□ -0.51
MSI2-209ENST00000579483 CALM1P0DP23 149 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 CALM2P0DP24 149 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 CALM3P0DP25 149 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 HIBADHP31937 336 aaKnown RBP11.87□□□□□ -0.51
MSI2-209ENST00000579483 IL13P35225 146 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 CDR1P51861 262 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
MSI2-209ENST00000579483 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
MSI2-209ENST00000579483 MCM5P33992 734 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 PICALMQ13492 652 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
MSI2-209ENST00000579483 IARSP41252 1262 aaKnown RBP11.86□□□□□ -0.51
MSI2-209ENST00000579483 TNFAIP1Q13829 316 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 ERMNQ8TAM6 284 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 TMOD4Q9NZQ9 345 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 PARD3Q8TEW0 1356 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 TSG101Q99816 390 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 WTAPQ15007 396 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 DNAJC10Q8IXB1 793 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 MRPL50Q8N5N7 158 aaKnown RBP11.86□□□□□ -0.51
MSI2-209ENST00000579483 PDILTQ8N807 584 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 ARHGEF6Q15052 776 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
MSI2-209ENST00000579483 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
MSI2-209ENST00000579483 SBNO2Q9Y2G9 1366 aa11.86□□□□□ -0.51
MSI2-209ENST00000579483 AMPD3Q01432 767 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 MPNDQ8N594 471 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
MSI2-209ENST00000579483 FAM135BQ49AJ0 1406 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 INSRP06213 1382 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 CBFA2T2O43439 604 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 PUM3Q15397 648 aaKnown RBP11.85□□□□□ -0.51
MSI2-209ENST00000579483 ANKRD44Q8N8A2 993 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 BIN2Q9UBW5 565 aaPredicted RBP11.85□□□□□ -0.51
MSI2-209ENST00000579483 BMP15O95972 392 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 CALML4Q96GE6 196 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
MSI2-209ENST00000579483 A2ML1A8K2U0 1454 aa11.84□□□□□ -0.51
MSI2-209ENST00000579483 WDR17Q8IZU2 1322 aa11.84□□□□□ -0.51
MSI2-209ENST00000579483 IFIT1BQ5T764 474 aaKnown RBP11.84□□□□□ -0.51
MSI2-209ENST00000579483 ARHGAP31Q2M1Z3 1444 aa11.84□□□□□ -0.51
MSI2-209ENST00000579483 CCDC192P0DO97 292 aa11.84□□□□□ -0.51
MSI2-209ENST00000579483 PHKG2P15735 406 aa11.84□□□□□ -0.51
MSI2-209ENST00000579483 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
MSI2-209ENST00000579483 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
MSI2-209ENST00000579483 IBSPP21815 317 aaPredicted RBP11.83□□□□□ -0.51
MSI2-209ENST00000579483 RBM6P78332 1123 aaKnown RBP11.83□□□□□ -0.51
MSI2-209ENST00000579483 CETN1Q12798 172 aa11.83□□□□□ -0.51
MSI2-209ENST00000579483 PPFIBP1Q86W92 1011 aa11.83□□□□□ -0.51
MSI2-209ENST00000579483 NEK1Q96PY6 1258 aa11.83□□□□□ -0.51
MSI2-209ENST00000579483 TNMDQ9H2S6 317 aa11.83□□□□□ -0.51
MSI2-209ENST00000579483 METAP2P50579 478 aaKnown RBP eCLIP11.83□□□□□ -0.52
MSI2-209ENST00000579483 PAG1Q9NWQ8 432 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 KIAA0232Q92628 1395 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 EYA2O00167 538 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
MSI2-209ENST00000579483 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 LIMCH1Q9UPQ0 1083 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 SAMM50Q9Y512 469 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 ITGA6P23229 1130 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 NCBP1Q09161 790 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms