RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ZNF157P51786 506 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 DPP8Q6V1X1 898 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 KRT26Q7Z3Y9 468 aa18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 MICALL2Q8IY33 904 aa18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 REM2Q8IYK8 340 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 DPF2Q92785 391 aa18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 RSPH6AQ9H0K4 717 aa18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
CSNK1D-211ENST00000579316 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
CSNK1D-211ENST00000579316 KIF6Q6ZMV9 814 aa18.53■□□□□ 0.56
CSNK1D-211ENST00000579316 TTLL7Q6ZT98 887 aa18.53■□□□□ 0.56
CSNK1D-211ENST00000579316 MCM10Q7L590 875 aa18.53■□□□□ 0.56
CSNK1D-211ENST00000579316 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
CSNK1D-211ENST00000579316 NLRP3Q96P20 1036 aa18.53■□□□□ 0.56
CSNK1D-211ENST00000579316 BBOX1O75936 387 aa18.52■□□□□ 0.56
CSNK1D-211ENST00000579316 MPNDQ8N594 471 aa18.52■□□□□ 0.56
CSNK1D-211ENST00000579316 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-211ENST00000579316 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
CSNK1D-211ENST00000579316 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-211ENST00000579316 POLR2AP24928 1970 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-211ENST00000579316 ADM5C9JUS6 153 aa18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 PARP10Q53GL7 1025 aa18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 HABP4Q5JVS0 413 aaKnown RBP18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 SAMD7Q7Z3H4 446 aa18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
CSNK1D-211ENST00000579316 EGFRP00533 1210 aa18.49■□□□□ 0.55
CSNK1D-211ENST00000579316 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
CSNK1D-211ENST00000579316 ANKRD36CQ5JPF3 1778 aa18.48■□□□□ 0.55
CSNK1D-211ENST00000579316 MKI67P46013 3256 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-211ENST00000579316 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
CSNK1D-211ENST00000579316 DCPSQ96C86 337 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-211ENST00000579316 ZBTB12Q9Y330 459 aaPredicted RBP18.48■□□□□ 0.55
CSNK1D-211ENST00000579316 LRRC37AA6NMS7 1700 aa18.48■□□□□ 0.55
CSNK1D-211ENST00000579316 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
CSNK1D-211ENST00000579316 RPS12P25398 132 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-211ENST00000579316 TBC1D10BQ4KMP7 808 aaPredicted RBP18.47■□□□□ 0.55
CSNK1D-211ENST00000579316 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-211ENST00000579316 RASAL3Q86YV0 1011 aa18.47■□□□□ 0.55
CSNK1D-211ENST00000579316 LAMB2P55268 1798 aa18.47■□□□□ 0.55
CSNK1D-211ENST00000579316 PSMD14O00487 310 aa18.46■□□□□ 0.55
CSNK1D-211ENST00000579316 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
CSNK1D-211ENST00000579316 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
CSNK1D-211ENST00000579316 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
CSNK1D-211ENST00000579316 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.55
CSNK1D-211ENST00000579316 TMC4Q7Z404 712 aa18.45■□□□□ 0.54
CSNK1D-211ENST00000579316 ZNF296Q8WUU4 475 aaPredicted RBP18.45■□□□□ 0.54
CSNK1D-211ENST00000579316 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
CSNK1D-211ENST00000579316 FKBP1BP68106 108 aa18.44■□□□□ 0.54
CSNK1D-211ENST00000579316 GRAPQ13588 217 aa18.44■□□□□ 0.54
CSNK1D-211ENST00000579316 FBXO46Q6PJ61 603 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-211ENST00000579316 GRAPLQ8TC17 118 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-211ENST00000579316 HDAC9Q9UKV0 1011 aa18.44■□□□□ 0.54
CSNK1D-211ENST00000579316 HTTP42858 3142 aa18.43■□□□□ 0.54
CSNK1D-211ENST00000579316 PAPPA2Q9BXP8 1791 aa18.43■□□□□ 0.54
CSNK1D-211ENST00000579316 MYL6BP14649 208 aa18.43■□□□□ 0.54
CSNK1D-211ENST00000579316 SULF1Q8IWU6 871 aa18.43■□□□□ 0.54
CSNK1D-211ENST00000579316 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
CSNK1D-211ENST00000579316 CDCA5Q96FF9 252 aa18.43■□□□□ 0.54
CSNK1D-211ENST00000579316 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
CSNK1D-211ENST00000579316 KIF4BQ2VIQ3 1234 aa18.42■□□□□ 0.54
CSNK1D-211ENST00000579316 GGA3Q9NZ52 723 aa18.42■□□□□ 0.54
CSNK1D-211ENST00000579316 DDX60Q8IY21 1712 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-211ENST00000579316 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
CSNK1D-211ENST00000579316 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-211ENST00000579316 DDX46Q7L014 1031 aaKnown RBP18.41■□□□□ 0.54
CSNK1D-211ENST00000579316 LRP10Q7Z4F1 713 aa18.41■□□□□ 0.54
CSNK1D-211ENST00000579316 ZNF609O15014 1411 aa18.4■□□□□ 0.54
CSNK1D-211ENST00000579316 WASHC4Q2M389 1173 aa18.4■□□□□ 0.54
CSNK1D-211ENST00000579316 CFAP53Q96M91 514 aa18.4■□□□□ 0.54
CSNK1D-211ENST00000579316 DBNDD1Q9H9R9 158 aa18.4■□□□□ 0.54
CSNK1D-211ENST00000579316 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
CSNK1D-211ENST00000579316 GPR25O00155 361 aa18.39■□□□□ 0.53
CSNK1D-211ENST00000579316 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
CSNK1D-211ENST00000579316 FXR1P51114 621 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSNK1D-211ENST00000579316 RBM26Q5T8P6 1007 aaKnown RBP18.39■□□□□ 0.53
CSNK1D-211ENST00000579316 CFHR5Q9BXR6 569 aa18.39■□□□□ 0.53
CSNK1D-211ENST00000579316 ASTN2O75129 1339 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-211ENST00000579316 TAF1P21675 1872 aa18.38■□□□□ 0.53
CSNK1D-211ENST00000579316 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
CSNK1D-211ENST00000579316 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
CSNK1D-211ENST00000579316 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
CSNK1D-211ENST00000579316 ECE2O60344 883 aa18.37■□□□□ 0.53
CSNK1D-211ENST00000579316 TM4SF4P48230 202 aa18.37■□□□□ 0.53
CSNK1D-211ENST00000579316 NLRP10Q86W26 655 aa18.37■□□□□ 0.53
CSNK1D-211ENST00000579316 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-211ENST00000579316 KCNQ5Q9NR82 932 aa18.37■□□□□ 0.53
CSNK1D-211ENST00000579316 VIL1P09327 827 aaKnown RBP18.36■□□□□ 0.53
CSNK1D-211ENST00000579316 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-211ENST00000579316 KIAA0100Q14667 2235 aaKnown RBP18.36■□□□□ 0.53
CSNK1D-211ENST00000579316 PDIA6Q15084 440 aa18.36■□□□□ 0.53
CSNK1D-211ENST00000579316 SCN9AQ15858 1988 aa18.36■□□□□ 0.53
CSNK1D-211ENST00000579316 POLLQ9UGP5 575 aa18.36■□□□□ 0.53
CSNK1D-211ENST00000579316 RBBP6Q7Z6E9 1792 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-211ENST00000579316 SH3TC1Q8TE82 1336 aa18.35■□□□□ 0.53
CSNK1D-211ENST00000579316 PITPNM2Q9BZ72 1349 aa18.35■□□□□ 0.53
CSNK1D-211ENST00000579316 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
CSNK1D-211ENST00000579316 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms