RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 LRRFIP2Q9Y608 721 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-209ENST00000578904 PDE8AO60658 829 aa17.32■□□□□ 0.36
CSNK1D-209ENST00000578904 NBPF7P0C2Y1 421 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-209ENST00000578904 ATP8B2P98198 1209 aa17.32■□□□□ 0.36
CSNK1D-209ENST00000578904 SLC10A5Q5PT55 438 aa17.32■□□□□ 0.36
CSNK1D-209ENST00000578904 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
CSNK1D-209ENST00000578904 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-209ENST00000578904 COL11A2P13942 1736 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-209ENST00000578904 KDM2BQ8NHM5 1336 aa17.31■□□□□ 0.36
CSNK1D-209ENST00000578904 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
CSNK1D-209ENST00000578904 MYH3P11055 1940 aa17.31■□□□□ 0.36
CSNK1D-209ENST00000578904 IGHDP01880 384 aa17.3■□□□□ 0.36
CSNK1D-209ENST00000578904 CTSWP56202 376 aa17.3■□□□□ 0.36
CSNK1D-209ENST00000578904 TGFB2P61812 414 aa17.3■□□□□ 0.36
CSNK1D-209ENST00000578904 C3orf67Q6ZVT6 689 aa17.3■□□□□ 0.36
CSNK1D-209ENST00000578904 C2CD5Q86YS7 1000 aa17.3■□□□□ 0.36
CSNK1D-209ENST00000578904 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
CSNK1D-209ENST00000578904 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
CSNK1D-209ENST00000578904 H0YIN7 160 aa17.29■□□□□ 0.36
CSNK1D-209ENST00000578904 CHRNA5P30532 468 aa17.29■□□□□ 0.36
CSNK1D-209ENST00000578904 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
CSNK1D-209ENST00000578904 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-209ENST00000578904 PLA2G12BQ9BX93 195 aa17.29■□□□□ 0.36
CSNK1D-209ENST00000578904 MTX1Q13505 466 aa17.28■□□□□ 0.36
CSNK1D-209ENST00000578904 CRY2Q49AN0 593 aa17.28■□□□□ 0.36
CSNK1D-209ENST00000578904 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
CSNK1D-209ENST00000578904 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-209ENST00000578904 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
CSNK1D-209ENST00000578904 DLEC1Q9Y238 1755 aa17.28■□□□□ 0.36
CSNK1D-209ENST00000578904 A0A0G2JLW4 131 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 SRGNP10124 158 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 DPEP1P16444 411 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 ZNF622Q969S3 477 aaKnown RBP eCLIP17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 BICC1Q9H694 974 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 DCTPP1Q9H773 170 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
CSNK1D-209ENST00000578904 NPR1P16066 1061 aa17.26■□□□□ 0.35
CSNK1D-209ENST00000578904 FOXO4P98177 505 aa17.26■□□□□ 0.35
CSNK1D-209ENST00000578904 EPHA10Q5JZY3 1008 aa17.26■□□□□ 0.35
CSNK1D-209ENST00000578904 IFFO2Q5TF58 517 aa17.26■□□□□ 0.35
CSNK1D-209ENST00000578904 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
CSNK1D-209ENST00000578904 MASTLQ96GX5 879 aa17.26■□□□□ 0.35
CSNK1D-209ENST00000578904 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
CSNK1D-209ENST00000578904 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
CSNK1D-209ENST00000578904 DDX46Q7L014 1031 aaKnown RBP17.25■□□□□ 0.35
CSNK1D-209ENST00000578904 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CSNK1D-209ENST00000578904 TTLL11Q8NHH1 800 aa17.25■□□□□ 0.35
CSNK1D-209ENST00000578904 RBM17Q96I25 401 aaKnown RBP17.25■□□□□ 0.35
CSNK1D-209ENST00000578904 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
CSNK1D-209ENST00000578904 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
CSNK1D-209ENST00000578904 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
CSNK1D-209ENST00000578904 GREM2Q9H772 168 aa17.24■□□□□ 0.35
CSNK1D-209ENST00000578904 CSF1RP07333 972 aa17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 POLA2Q14181 598 aa17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 CNKSR1Q969H4 720 aa17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 WWC3Q9ULE0 1092 aa17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 RTL9Q8NET4 1388 aa17.23■□□□□ 0.35
CSNK1D-209ENST00000578904 PNMA6EA0A0J9YXQ4 647 aa17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 KCNA3P22001 575 aa17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 ITGA6P23229 1130 aa17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 CRAMP1Q96RY5 1269 aa17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 PIM2Q9P1W9 311 aa17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 CACNA1SQ13698 1873 aa17.22■□□□□ 0.35
CSNK1D-209ENST00000578904 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 ALDH1B1P30837 517 aa17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 C1QTNF8P60827 252 aa17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 IFIT5Q13325 482 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 GRAPQ13588 217 aa17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
CSNK1D-209ENST00000578904 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
CSNK1D-209ENST00000578904 NUCB1Q02818 461 aa17.2■□□□□ 0.34
CSNK1D-209ENST00000578904 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-209ENST00000578904 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
CSNK1D-209ENST00000578904 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-209ENST00000578904 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
CSNK1D-209ENST00000578904 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-209ENST00000578904 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
CSNK1D-209ENST00000578904 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-209ENST00000578904 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
CSNK1D-209ENST00000578904 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
CSNK1D-209ENST00000578904 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
CSNK1D-209ENST00000578904 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-209ENST00000578904 COL4A1P02462 1669 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms