RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 GPATCH11Q8N954 259 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 TRPM4Q8TD43 1214 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 SLC10A4Q96EP9 437 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 DEPDC7Q96QD5 511 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 CSRNP1Q96S65 589 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 TRIM55Q9BYV6 548 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 HOMER2Q9NSB8 354 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 SNTG2Q9NY99 539 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 STRIP2Q9ULQ0 834 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 TLL2Q9Y6L7 1015 aa5.62□□□□□ -1.51
GAPLINC-201ENST00000578664 A0A0U1RQG5 324 aaPredicted RBP5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 CAND2O75155 1236 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 NOS2P35228 1153 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 FOXC1Q12948 553 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 HDAC1Q13547 482 aaPredicted RBP5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 RASA3Q14644 834 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 ATAD2Q6PL18 1390 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 ANKS3Q6ZW76 656 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 ERMP1Q7Z2K6 904 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 KRT26Q7Z3Y9 468 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 SNIP1Q8TAD8 396 aaKnown RBP5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 SH3TC2Q8TF17 1288 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 SENP7Q9BQF6 1050 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 SAP130Q9H0E3 1048 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 CCDC113Q9H0I3 377 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 DNAJC25Q9H1X3 360 aa5.61□□□□□ -1.51
GAPLINC-201ENST00000578664 TNFRSF10BO14763 440 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 WDHD1O75717 1129 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 ADH1CP00326 375 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 PTMSP20962 102 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 GNALP38405 381 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 CBLBQ13191 982 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 NBPF20Q3BBV1 942 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 C16orf86Q6ZW13 317 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 SEPT12Q8IYM1 358 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 SAMD3Q8N6K7 520 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 ABTB2Q8N961 1025 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 SCG3Q8WXD2 468 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 IL17RAQ96F46 866 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 SLC39A13Q96H72 371 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 KCTD15Q96SI1 283 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 CNTN3Q9P232 1028 aa5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 THRAP3Q9Y2W1 955 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-201ENST00000578664 FAM221BA6H8Z2 402 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 TNFRSF10AO00220 468 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 PLIN1O60240 522 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 ETFBP38117 255 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 EVA1CP58658 441 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 FOXD4Q12950 439 aaPredicted RBP5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 NR5A1Q13285 461 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 COL9A2Q14055 689 aaPredicted RBP5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 INTS6LQ5JSJ4 861 aaKnown RBP5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 KRBA2Q6ZNG9 492 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 VASH1Q7L8A9 365 aaPredicted RBP5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 STAG2Q8N3U4 1231 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 LILRB2Q8N423 598 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 FEZ1Q99689 392 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 ZNF700Q9H0M5 742 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 TMEM260Q9NX78 707 aa5.59□□□□□ -1.51
GAPLINC-201ENST00000578664 CCDC189A1A4V9 331 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 J3QL48 77 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 BACH1O14867 736 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 NR3C2P08235 984 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 SMPD1P17405 629 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 SAFB2Q14151 953 aaKnown RBP eCLIP5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 ZRSR2Q15696 482 aaKnown RBP5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 NFE2Q16621 373 aaPredicted RBP5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 COX20Q5RI15 118 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 PGBD3Q8N328 593 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 KLF16Q9BXK1 252 aaPredicted RBP5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 ZNF358Q9NW07 568 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 SWAP70Q9UH65 585 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 MSRB2Q9Y3D2 182 aa5.58□□□□□ -1.52
GAPLINC-201ENST00000578664 ESYT3A0FGR9 886 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 IFRD1O00458 451 aaPredicted RBP5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 ALDH1A1P00352 501 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 FSHRP23945 695 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 DHX8Q14562 1220 aaKnown RBP5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 ARID5BQ14865 1188 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 CYP4X1Q8N118 509 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 SYNPOQ8N3V7 929 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 DNAJC7Q99615 494 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 SPON2Q9BUD6 331 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 RSRP1Q9BUV0 290 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 KANSL2Q9H9L4 492 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 PRDM10Q9NQV6 1147 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 POLIQ9UNA4 740 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 PDZRN3Q9UPQ7 1066 aa5.57□□□□□ -1.52
GAPLINC-201ENST00000578664 TTC24A2A3L6 582 aaPredicted RBP5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 ERVH48-1M5A8F1 160 aa5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 WASLO00401 505 aaPredicted RBP5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 EIF1AYO14602 144 aaKnown RBP5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 ZBTB39O15060 712 aa5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 LDHAP00338 332 aaKnown RBP5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 KRT18P05783 430 aaKnown RBP5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 HCLS1P14317 486 aaPredicted RBP5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 PMLP29590 882 aa5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 NASPP49321 788 aaPredicted RBP5.56□□□□□ -1.52
GAPLINC-201ENST00000578664 EPHB1P54762 984 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms