RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 LMBR1LQ6UX01 489 aa15.19■□□□□ 0.02
IFT20-207ENST00000578547 C2CD5Q86YS7 1000 aa15.19■□□□□ 0.02
IFT20-207ENST00000578547 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
IFT20-207ENST00000578547 MYH3P11055 1940 aa15.19■□□□□ 0.02
IFT20-207ENST00000578547 COL11A2P13942 1736 aaPredicted RBP15.18■□□□□ 0.02
IFT20-207ENST00000578547 KCNA3P22001 575 aa15.18■□□□□ 0.02
IFT20-207ENST00000578547 ANKRD44Q8N8A2 993 aa15.18■□□□□ 0.02
IFT20-207ENST00000578547 PLA2G12BQ9BX93 195 aa15.18■□□□□ 0.02
IFT20-207ENST00000578547 H0YIN7 160 aa15.17■□□□□ 0.02
IFT20-207ENST00000578547 SRGNP10124 158 aa15.17■□□□□ 0.02
IFT20-207ENST00000578547 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
IFT20-207ENST00000578547 CRY2Q49AN0 593 aa15.17■□□□□ 0.02
IFT20-207ENST00000578547 CCDC152Q4G0S7 254 aa15.17■□□□□ 0.02
IFT20-207ENST00000578547 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
IFT20-207ENST00000578547 SRCAPQ6ZRS2 3230 aa15.17■□□□□ 0.02
IFT20-207ENST00000578547 KIF13BQ9NQT8 1826 aa15.16■□□□□ 0.02
IFT20-207ENST00000578547 SF3B3Q15393 1217 aaKnown RBP15.16■□□□□ 0.02
IFT20-207ENST00000578547 RABL6Q3YEC7 729 aaPredicted RBP15.16■□□□□ 0.02
IFT20-207ENST00000578547 TTLL11Q8NHH1 800 aa15.16■□□□□ 0.02
IFT20-207ENST00000578547 GREM2Q9H772 168 aa15.16■□□□□ 0.02
IFT20-207ENST00000578547 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
IFT20-207ENST00000578547 CEP85Q6P2H3 762 aa15.15■□□□□ 0.02
IFT20-207ENST00000578547 ZNF622Q969S3 477 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■□□□□ 8.4
IFT20-207ENST00000578547 MASTLQ96GX5 879 aa15.15■□□□□ 0.02
IFT20-207ENST00000578547 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
IFT20-207ENST00000578547 PDZRN3Q9UPQ7 1066 aa15.15■□□□□ 0.02
IFT20-207ENST00000578547 PNMA6EA0A0J9YXQ4 647 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 CSF1RP07333 972 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 NPR1P16066 1061 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 ITGA6P23229 1130 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 HOXA10P31260 410 aaPredicted RBP15.14■□□□□ 0.01
IFT20-207ENST00000578547 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
IFT20-207ENST00000578547 AAMPQ13685 434 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 CCDC57Q2TAC2 916 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 TAF7LQ5H9L4 462 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 STYK1Q6J9G0 422 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 SEC31BQ9NQW1 1179 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 PCDHB15Q9Y5E8 787 aa15.14■□□□□ 0.01
IFT20-207ENST00000578547 ANKRD18BA2A2Z9 1011 aa15.13■□□□□ 0.01
IFT20-207ENST00000578547 DDX46Q7L014 1031 aaKnown RBP15.13■□□□□ 0.01
IFT20-207ENST00000578547 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
IFT20-207ENST00000578547 KIAA1551Q9HCM1 1747 aa15.13■□□□□ 0.01
IFT20-207ENST00000578547 PIM2Q9P1W9 311 aa15.13■□□□□ 0.01
IFT20-207ENST00000578547 COL4A1P02462 1669 aa15.12■□□□□ 0.01
IFT20-207ENST00000578547 RTL9Q8NET4 1388 aa15.12■□□□□ 0.01
IFT20-207ENST00000578547 ATP8B2P98198 1209 aa15.12■□□□□ 0.01
IFT20-207ENST00000578547 MTX1Q13505 466 aa15.12■□□□□ 0.01
IFT20-207ENST00000578547 KLHDC4Q8TBB5 520 aa15.12■□□□□ 0.01
IFT20-207ENST00000578547 SPEF2Q9C093 1822 aa15.12■□□□□ 0.01
IFT20-207ENST00000578547 TAF1P21675 1872 aa15.12■□□□□ 0.01
IFT20-207ENST00000578547 DLEC1Q9Y238 1755 aa15.11■□□□□ 0.01
IFT20-207ENST00000578547 HMMRO75330 724 aa15.11■□□□□ 0.01
IFT20-207ENST00000578547 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
IFT20-207ENST00000578547 RPAP2Q8IXW5 612 aaPredicted RBP15.11■□□□□ 0.01
IFT20-207ENST00000578547 TTLL6Q8N841 843 aa15.11■□□□□ 0.01
IFT20-207ENST00000578547 CNKSR1Q969H4 720 aa15.11■□□□□ 0.01
IFT20-207ENST00000578547 ZNF594Q96JF6 807 aaPredicted RBP15.11■□□□□ 0.01
IFT20-207ENST00000578547 CRAMP1Q96RY5 1269 aa15.11■□□□□ 0.01
IFT20-207ENST00000578547 CDC5LQ99459 802 aaKnown RBP15.11■□□□□ 0.01
IFT20-207ENST00000578547 CACNA1SQ13698 1873 aa15.11■□□□□ 0.01
IFT20-207ENST00000578547 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
IFT20-207ENST00000578547 DALRD3Q5D0E6 543 aaKnown RBP15.1■□□□□ 0.01
IFT20-207ENST00000578547 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
IFT20-207ENST00000578547 CELF1Q92879 486 aaKnown RBP15.1■□□□□ 0.01
IFT20-207ENST00000578547 SIL1Q9H173 461 aa15.1■□□□□ 0.01
IFT20-207ENST00000578547 PA2G4Q9UQ80 394 aaKnown RBP15.1■□□□□ 0.01
IFT20-207ENST00000578547 IGHMBP2P38935 993 aaKnown RBP15.09■□□□□ 0.01
IFT20-207ENST00000578547 RFX5P48382 616 aaPredicted RBP15.09■□□□□ 0.01
IFT20-207ENST00000578547 GRAPQ13588 217 aa15.09■□□□□ 0.01
IFT20-207ENST00000578547 POLA2Q14181 598 aa15.09■□□□□ 0.01
IFT20-207ENST00000578547 PRPF40BQ6NWY9 871 aaKnown RBP15.09■□□□□ 0.01
IFT20-207ENST00000578547 GRAPLQ8TC17 118 aaPredicted RBP15.09■□□□□ 0.01
IFT20-207ENST00000578547 SSH3Q8TE77 659 aa15.09■□□□□ 0.01
IFT20-207ENST00000578547 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
IFT20-207ENST00000578547 PPEF1O14829 653 aaPredicted RBP15.08■□□□□ 0
IFT20-207ENST00000578547 RPS8P62241 208 aaKnown RBP15.08■□□□□ 0
IFT20-207ENST00000578547 SLC51AQ86UW1 340 aa15.08■□□□□ 0
IFT20-207ENST00000578547 C7orf43Q8WVR3 580 aa15.08■□□□□ 0
IFT20-207ENST00000578547 MPHOSPH8Q99549 860 aa15.08■□□□□ 0
IFT20-207ENST00000578547 BCS1LQ9Y276 419 aa15.08■□□□□ 0
IFT20-207ENST00000578547 SURF6O75683 361 aaKnown RBP15.07■□□□□ 0
IFT20-207ENST00000578547 BBOX1O75936 387 aa15.07■□□□□ 0
IFT20-207ENST00000578547 YBX3P16989 372 aaKnown RBP eCLIP15.07■□□□□ 0
IFT20-207ENST00000578547 PTPN12Q05209 780 aaKnown RBP15.07■□□□□ 0
IFT20-207ENST00000578547 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
IFT20-207ENST00000578547 OLFM4Q6UX06 510 aa15.07■□□□□ 0
IFT20-207ENST00000578547 LDHAL6AQ6ZMR3 332 aa15.07■□□□□ 0
IFT20-207ENST00000578547 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
IFT20-207ENST00000578547 PUS3Q9BZE2 481 aaKnown RBP15.07■□□□□ 0
IFT20-207ENST00000578547 CNNM1Q9NRU3 951 aa15.07■□□□□ 0
IFT20-207ENST00000578547 APBB1O00213 710 aa15.06■□□□□ 0
IFT20-207ENST00000578547 C21orf2O43822 256 aa15.06■□□□□ 0
IFT20-207ENST00000578547 RWDD1Q9H446 243 aaPredicted RBP15.06■□□□□ 0
IFT20-207ENST00000578547 COPRSQ9NQ92 184 aa15.06■□□□□ 0
IFT20-207ENST00000578547 EXOC6BQ9Y2D4 811 aa15.06■□□□□ 0
IFT20-207ENST00000578547 SLX4Q8IY92 1834 aa15.06■□□□□ 0
IFT20-207ENST00000578547 HDAC1Q13547 482 aaPredicted RBP15.05■□□□□ -0
IFT20-207ENST00000578547 GPR162Q16538 588 aa15.05■□□□□ -0
IFT20-207ENST00000578547 LRRC24Q50LG9 513 aa15.05■□□□□ -0
IFT20-207ENST00000578547 ERICH6BQ5W0A0 696 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms