RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
USP22-208ENST00000578446 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
USP22-208ENST00000578446 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
USP22-208ENST00000578446 H0YIN7 160 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 CSF1RP07333 972 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 IFIT5Q13325 482 aaKnown RBP13.31□□□□□ -0.28
USP22-208ENST00000578446 CCDC57Q2TAC2 916 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 CEP85Q6P2H3 762 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
USP22-208ENST00000578446 GREM2Q9H772 168 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 PDZRN3Q9UPQ7 1066 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
USP22-208ENST00000578446 KLRG2A4D1S0 409 aaPredicted RBP13.3□□□□□ -0.28
USP22-208ENST00000578446 SRGNP10124 158 aa13.3□□□□□ -0.28
USP22-208ENST00000578446 NPR1P16066 1061 aa13.3□□□□□ -0.28
USP22-208ENST00000578446 ITGA6P23229 1130 aa13.3□□□□□ -0.28
USP22-208ENST00000578446 CHRNA5P30532 468 aa13.3□□□□□ -0.28
USP22-208ENST00000578446 MTX1Q13505 466 aa13.3□□□□□ -0.28
USP22-208ENST00000578446 TAF7LQ5H9L4 462 aa13.3□□□□□ -0.28
USP22-208ENST00000578446 RBM17Q96I25 401 aaKnown RBP13.3□□□□□ -0.28
USP22-208ENST00000578446 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
USP22-208ENST00000578446 HMMRO75330 724 aa13.29□□□□□ -0.28
USP22-208ENST00000578446 TGFB2P61812 414 aa13.29□□□□□ -0.28
USP22-208ENST00000578446 RPAP2Q8IXW5 612 aaPredicted RBP13.29□□□□□ -0.28
USP22-208ENST00000578446 ZNF622Q969S3 477 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■□□□ 12.3
USP22-208ENST00000578446 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
USP22-208ENST00000578446 CDC5LQ99459 802 aaKnown RBP13.29□□□□□ -0.28
USP22-208ENST00000578446 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
USP22-208ENST00000578446 ANKRD31Q8N7Z5 1873 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 PNMA6EA0A0J9YXQ4 647 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 DPEP1P16444 411 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 HOXA10P31260 410 aaPredicted RBP13.28□□□□□ -0.28
USP22-208ENST00000578446 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 STYK1Q6J9G0 422 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 SEC31BQ9NQW1 1179 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 PCDHB15Q9Y5E8 787 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 LRP5O75197 1615 aa13.28□□□□□ -0.28
USP22-208ENST00000578446 IGHMBP2P38935 993 aaKnown RBP13.27□□□□□ -0.29
USP22-208ENST00000578446 GRAPQ13588 217 aa13.27□□□□□ -0.29
USP22-208ENST00000578446 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
USP22-208ENST00000578446 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.29
USP22-208ENST00000578446 CRAMP1Q96RY5 1269 aa13.27□□□□□ -0.29
USP22-208ENST00000578446 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.29
USP22-208ENST00000578446 SRCAPQ6ZRS2 3230 aa13.26□□□□□ -0.29
USP22-208ENST00000578446 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
USP22-208ENST00000578446 POLA2Q14181 598 aa13.26□□□□□ -0.29
USP22-208ENST00000578446 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
USP22-208ENST00000578446 NLGN2Q8NFZ4 835 aa13.26□□□□□ -0.29
USP22-208ENST00000578446 SSH3Q8TE77 659 aa13.26□□□□□ -0.29
USP22-208ENST00000578446 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
USP22-208ENST00000578446 CNKSR1Q969H4 720 aa13.26□□□□□ -0.29
USP22-208ENST00000578446 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
USP22-208ENST00000578446 PPEF1O14829 653 aaPredicted RBP13.25□□□□□ -0.29
USP22-208ENST00000578446 RFX5P48382 616 aaPredicted RBP13.25□□□□□ -0.29
USP22-208ENST00000578446 RPS8P62241 208 aaKnown RBP13.25□□□□□ -0.29
USP22-208ENST00000578446 ERICH6BQ5W0A0 696 aa13.25□□□□□ -0.29
USP22-208ENST00000578446 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
USP22-208ENST00000578446 KLHDC4Q8TBB5 520 aa13.25□□□□□ -0.29
USP22-208ENST00000578446 ZNF594Q96JF6 807 aaPredicted RBP13.25□□□□□ -0.29
USP22-208ENST00000578446 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
USP22-208ENST00000578446 SIL1Q9H173 461 aa13.25□□□□□ -0.29
USP22-208ENST00000578446 PIM2Q9P1W9 311 aa13.25□□□□□ -0.29
USP22-208ENST00000578446 PA2G4Q9UQ80 394 aaKnown RBP13.25□□□□□ -0.29
USP22-208ENST00000578446 MYH3P11055 1940 aa13.24□□□□□ -0.29
USP22-208ENST00000578446 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
USP22-208ENST00000578446 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
USP22-208ENST00000578446 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
USP22-208ENST00000578446 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
USP22-208ENST00000578446 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
USP22-208ENST00000578446 TMX4Q9H1E5 349 aaPredicted RBP13.24□□□□□ -0.29
USP22-208ENST00000578446 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
USP22-208ENST00000578446 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
USP22-208ENST00000578446 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
USP22-208ENST00000578446 BBOX1O75936 387 aa13.23□□□□□ -0.29
USP22-208ENST00000578446 KCNA3P22001 575 aa13.23□□□□□ -0.29
USP22-208ENST00000578446 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
USP22-208ENST00000578446 DALRD3Q5D0E6 543 aaKnown RBP13.23□□□□□ -0.29
USP22-208ENST00000578446 TMC4Q7Z404 712 aa13.23□□□□□ -0.29
USP22-208ENST00000578446 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
USP22-208ENST00000578446 COPRSQ9NQ92 184 aa13.23□□□□□ -0.29
USP22-208ENST00000578446 COL4A1P02462 1669 aa13.22□□□□□ -0.29
USP22-208ENST00000578446 EYA2O00167 538 aa13.22□□□□□ -0.29
USP22-208ENST00000578446 CIAO1O76071 339 aa13.22□□□□□ -0.29
USP22-208ENST00000578446 G3BP1Q13283 466 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP22-208ENST00000578446 HSP90AB4PQ58FF6 505 aa13.22□□□□□ -0.29
USP22-208ENST00000578446 BSDC1Q9NW68 430 aaPredicted RBP13.22□□□□□ -0.29
USP22-208ENST00000578446 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
USP22-208ENST00000578446 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
USP22-208ENST00000578446 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
USP22-208ENST00000578446 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
USP22-208ENST00000578446 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
USP22-208ENST00000578446 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
USP22-208ENST00000578446 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
USP22-208ENST00000578446 BCS1LQ9Y276 419 aa13.21□□□□□ -0.29
USP22-208ENST00000578446 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.29
USP22-208ENST00000578446 DLEC1Q9Y238 1755 aa13.21□□□□□ -0.29
USP22-208ENST00000578446 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
USP22-208ENST00000578446 APBB1O00213 710 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms