RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 LEKR1Q6ZMV7 388 aa13.96□□□□□ -0.17
ERBB2-206ENST00000578373 PUS7Q96PZ0 661 aaKnown RBP13.96□□□□□ -0.17
ERBB2-206ENST00000578373 ABCC1P33527 1531 aa13.96□□□□□ -0.18
ERBB2-206ENST00000578373 EIF2AK4Q9P2K8 1649 aaKnown RBP13.96□□□□□ -0.18
ERBB2-206ENST00000578373 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.18
ERBB2-206ENST00000578373 CCDC43Q96MW1 224 aaKnown RBP13.96□□□□□ -0.18
ERBB2-206ENST00000578373 A0A1B0GVL5 298 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 HMG20BQ9P0W2 317 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 DNAI1Q9UI46 699 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 SAMD9Q5K651 1589 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 GNG11P61952 73 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 UNC5CLQ8IV45 518 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 PRIMPOLQ96LW4 560 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
ERBB2-206ENST00000578373 CCDC171Q6TFL3 1326 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 FLT4P35916 1363 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 SGSM2O43147 1006 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 HOXC9P31274 260 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 GTF2F1P35269 517 aaKnown RBP eCLIP13.95□□□□□ -0.18
ERBB2-206ENST00000578373 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
ERBB2-206ENST00000578373 AFMP43652 599 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 SIRT2Q8IXJ6 389 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 PLEKHF1Q96S99 279 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 SYKP43405 635 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 MAP3K12Q12852 859 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 ZFYVE27Q5T4F4 411 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 NPHP3Q7Z494 1330 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 DBNDD2Q9BQY9 259 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 PTPDC1A2A3K4 754 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 JAK2O60674 1132 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 STIM1Q13586 685 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 KIAA1328Q86T90 577 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 TSPYL1Q9H0U9 437 aa13.94□□□□□ -0.18
ERBB2-206ENST00000578373 ALDH1L1O75891 902 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 SETQ01105 290 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-206ENST00000578373 CT47A1Q5JQC4 288 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-206ENST00000578373 NCOA7Q8NI08 942 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 GPT2Q8TD30 523 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 UBASH3AP57075 661 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 SLC9C2Q5TAH2 1124 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 ZSCAN16Q9H4T2 348 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-206ENST00000578373 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 ANKRD18BA2A2Z9 1011 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 ZNF445P59923 1031 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 SSRP1Q08945 709 aaKnown RBP13.93□□□□□ -0.18
ERBB2-206ENST00000578373 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
ERBB2-206ENST00000578373 KDM5CP41229 1560 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 INSRP06213 1382 aa13.93□□□□□ -0.18
ERBB2-206ENST00000578373 TNRQ92752 1358 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 CCDC102BQ68D86 513 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 GCP02774 474 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 SOGA3Q5TF21 947 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 TAF3Q5VWG9 929 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 PAG1Q9NWQ8 432 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 ZNF518AQ6AHZ1 1483 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 ZSCAN12O43309 604 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 PRC1O43663 620 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 CDC37L1Q7L3B6 337 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 WASF1Q92558 559 aa13.92□□□□□ -0.18
ERBB2-206ENST00000578373 ZNF594Q96JF6 807 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-206ENST00000578373 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
ERBB2-206ENST00000578373 UHRF1BP1LA0JNW5 1464 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 CASQ1P31415 396 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 NUP88Q99567 741 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-206ENST00000578373 ABCC4O15439 1325 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 TTC21AQ8NDW8 1320 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 ERLIN1O75477 346 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 LIG1P18858 919 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 IFNKQ9P0W0 207 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 UGGT1Q9NYU2 1555 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 BRD1O95696 1058 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 STX17P56962 302 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 PTH1RQ03431 593 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 PRM3Q9NNZ6 103 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 RTL1A6NKG5 1358 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 TTC41PQ6P2S7 1318 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 MAP3K5Q99683 1374 aa13.91□□□□□ -0.18
ERBB2-206ENST00000578373 SLC27A2O14975 620 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 GCC2Q8IWJ2 1684 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 KIF2AO00139 706 aaPredicted RBP13.9□□□□□ -0.18
ERBB2-206ENST00000578373 KIF5CO60282 957 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 GSDMDP57764 484 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 MEX3CQ5U5Q3 659 aaKnown RBP13.9□□□□□ -0.18
ERBB2-206ENST00000578373 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 IL17REQ8NFR9 667 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
ERBB2-206ENST00000578373 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
ERBB2-206ENST00000578373 SPTLC2O15270 562 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 NLRP5P59047 1200 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 SUCLG2Q96I99 432 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms