RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 SPTLC1O15269 473 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 ST8SIA5O15466 376 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 CYP27B1O15528 508 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 AMPHP49418 695 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 FUT2Q10981 343 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 TUSC1Q2TAM9 212 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 RSBN1LQ6PCB5 846 aaPredicted RBP5.58□□□□□ -1.52
PTPRM-206ENST00000578093 COG3Q96JB2 828 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 GGNBP2Q9H3C7 697 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 WBP1LQ9NX94 342 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 TERF2IPQ9NYB0 399 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 CD2APQ9Y5K6 639 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 ZNF831Q5JPB2 1677 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 ADAMTS7Q9UKP4 1686 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 SBF1O95248 1867 aa5.58□□□□□ -1.52
PTPRM-206ENST00000578093 C10orf71Q711Q0 1435 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 SMG6Q86US8 1419 aaKnown RBP5.57□□□□□ -1.52
PTPRM-206ENST00000578093 INSRP06213 1382 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 KDRP35968 1356 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 PCDH11XQ9BZA7 1347 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 PCDH11YQ9BZA8 1340 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 MOXD2PA6NHM9 499 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 FDX1P10109 184 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 NDUFV2P19404 249 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 APLP1P51693 650 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 ITPK1Q13572 414 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 HSP90AB2PQ58FF8 381 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 PPP1R18Q6NYC8 613 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 MPRIPQ6WCQ1 1025 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 LINC00116Q8NCU8 138 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 PCDHB3Q9Y5E6 796 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 TIAM2Q8IVF5 1701 aa5.57□□□□□ -1.52
PTPRM-206ENST00000578093 TNRC6CQ9HCJ0 1690 aaKnown RBP5.56□□□□□ -1.52
PTPRM-206ENST00000578093 FLT4P35916 1363 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 ST20-MTHFSA0A0A6YYL1 179 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 FYB1O15117 783 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 NR1I2O75469 434 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 TATP17735 454 aaPredicted RBP5.56□□□□□ -1.52
PTPRM-206ENST00000578093 CSPP1Q1MSJ5 1256 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 Q3C1V9 767 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 PROCA1Q8NCQ7 364 aaPredicted RBP5.56□□□□□ -1.52
PTPRM-206ENST00000578093 RAPGEF4Q8WZA2 1011 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 EMILIN1Q9Y6C2 1016 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 DLEC1Q9Y238 1755 aa5.56□□□□□ -1.52
PTPRM-206ENST00000578093 AFDNP55196 1824 aaKnown RBP5.55□□□□□ -1.52
PTPRM-206ENST00000578093 CGNL1Q0VF96 1302 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 HTRA3P83110 453 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 MORN1Q5T089 497 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 PRPF38BQ5VTL8 546 aaKnown RBP5.55□□□□□ -1.52
PTPRM-206ENST00000578093 ERICH6Q7L0X2 663 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 ZSCAN1Q8NBB4 408 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 PIGBQ92521 554 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 PUS7Q96PZ0 661 aaKnown RBP5.55□□□□□ -1.52
PTPRM-206ENST00000578093 ZBTB3Q9H5J0 574 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 LIMD1Q9UGP4 676 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 CCDC88AQ3V6T2 1871 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 NSD3Q9BZ95 1437 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 TONSLQ96HA7 1378 aa5.55□□□□□ -1.52
PTPRM-206ENST00000578093 KCPQ6ZWJ8 1503 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 LOC102724428A0A0B4J2F2 783 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 SPDYE5A6NIY4 337 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 SSFA2P28290 1259 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 SIK1P57059 783 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 MTMR2Q13614 643 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 PUS10Q3MIT2 529 aaKnown RBP5.54□□□□□ -1.52
PTPRM-206ENST00000578093 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 SLC4A9Q96Q91 983 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPRM-206ENST00000578093 NMRK2Q9NPI5 230 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 ASAP1Q9ULH1 1129 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 KDM6AO15550 1401 aaPredicted RBP5.54□□□□□ -1.52
PTPRM-206ENST00000578093 SCN11AQ9UI33 1791 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 COL11A2P13942 1736 aaPredicted RBP5.54□□□□□ -1.52
PTPRM-206ENST00000578093 KIF24Q5T7B8 1368 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 CACNA1SQ13698 1873 aa5.54□□□□□ -1.52
PTPRM-206ENST00000578093 C6orf229H3BNL8 230 aa5.53□□□□□ -1.52
PTPRM-206ENST00000578093 FMNL1O95466 1100 aaPredicted RBP5.53□□□□□ -1.52
PTPRM-206ENST00000578093 MMP10P09238 476 aa5.53□□□□□ -1.52
PTPRM-206ENST00000578093 GUCA2AQ02747 115 aa5.53□□□□□ -1.52
PTPRM-206ENST00000578093 KCNMA1Q12791 1236 aa5.53□□□□□ -1.52
PTPRM-206ENST00000578093 DNAJC5GQ8N7S2 189 aa5.53□□□□□ -1.52
PTPRM-206ENST00000578093 NRXN2Q9P2S2 1712 aa5.53□□□□□ -1.52
PTPRM-206ENST00000578093 ANKRD31Q8N7Z5 1873 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 A0A0G2JLW4 131 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 BTBD11A6QL63 1104 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 LILRB3O75022 631 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 PHKG2P15735 406 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 TMEM259Q4ZIN3 620 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 PPP2R2DQ66LE6 453 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 BLOC1S3Q6QNY0 202 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 SCUBE3Q8IX30 993 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 SMARCC1Q92922 1105 aaPredicted RBP5.52□□□□□ -1.53
PTPRM-206ENST00000578093 HLA-CQ95604 372 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 CARD14Q9BXL6 1004 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 IL21Q9HBE4 155 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 ATG3Q9NT62 314 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 PCDHGC3Q9UN70 934 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 BCS1LQ9Y276 419 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms