RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 COL4A1P02462 1669 aa15.96■□□□□ 0.15
MKS1-206ENST00000577824 KCNA3P22001 575 aa15.96■□□□□ 0.15
MKS1-206ENST00000577824 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
MKS1-206ENST00000577824 JARID2Q92833 1246 aaPredicted RBP15.96■□□□□ 0.15
MKS1-206ENST00000577824 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
MKS1-206ENST00000577824 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
MKS1-206ENST00000577824 MTX1Q13505 466 aa15.95■□□□□ 0.14
MKS1-206ENST00000577824 EPHA10Q5JZY3 1008 aa15.95■□□□□ 0.14
MKS1-206ENST00000577824 STYK1Q6J9G0 422 aa15.95■□□□□ 0.14
MKS1-206ENST00000577824 PIAS4Q8N2W9 510 aaPredicted RBP15.95■□□□□ 0.14
MKS1-206ENST00000577824 ANKRD44Q8N8A2 993 aa15.95■□□□□ 0.14
MKS1-206ENST00000577824 BICC1Q9H694 974 aaKnown RBP15.95■□□□□ 0.14
MKS1-206ENST00000577824 ZBTB40Q9NUA8 1239 aa15.95■□□□□ 0.14
MKS1-206ENST00000577824 GNAI2P04899 355 aa15.94■□□□□ 0.14
MKS1-206ENST00000577824 NPR1P16066 1061 aa15.94■□□□□ 0.14
MKS1-206ENST00000577824 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
MKS1-206ENST00000577824 NLGN2Q8NFZ4 835 aa15.94■□□□□ 0.14
MKS1-206ENST00000577824 MASTLQ96GX5 879 aa15.94■□□□□ 0.14
MKS1-206ENST00000577824 SYT17Q9BSW7 474 aa15.94■□□□□ 0.14
MKS1-206ENST00000577824 H0YIN7 160 aa15.93■□□□□ 0.14
MKS1-206ENST00000577824 AAMPQ13685 434 aa15.93■□□□□ 0.14
MKS1-206ENST00000577824 C2CD5Q86YS7 1000 aa15.93■□□□□ 0.14
MKS1-206ENST00000577824 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
MKS1-206ENST00000577824 LRRFIP2Q9Y608 721 aaKnown RBP15.93■□□□□ 0.14
MKS1-206ENST00000577824 ARFGEF1Q9Y6D6 1849 aa15.92■□□□□ 0.14
MKS1-206ENST00000577824 DPEP1P16444 411 aa15.92■□□□□ 0.14
MKS1-206ENST00000577824 CHRNA5P30532 468 aa15.92■□□□□ 0.14
MKS1-206ENST00000577824 SNED1Q8TER0 1413 aa15.92■□□□□ 0.14
MKS1-206ENST00000577824 GRAPQ13588 217 aa15.91■□□□□ 0.14
MKS1-206ENST00000577824 FAM161AQ3B820 660 aa15.91■□□□□ 0.14
MKS1-206ENST00000577824 LMBR1LQ6UX01 489 aa15.91■□□□□ 0.14
MKS1-206ENST00000577824 GRAPLQ8TC17 118 aaPredicted RBP15.91■□□□□ 0.14
MKS1-206ENST00000577824 RPGRQ92834 1020 aaKnown RBP15.91■□□□□ 0.14
MKS1-206ENST00000577824 RBM17Q96I25 401 aaKnown RBP15.91■□□□□ 0.14
MKS1-206ENST00000577824 CRBNQ96SW2 442 aa15.91■□□□□ 0.14
MKS1-206ENST00000577824 GREM2Q9H772 168 aa15.91■□□□□ 0.14
MKS1-206ENST00000577824 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
MKS1-206ENST00000577824 ALDH1B1P30837 517 aa15.9■□□□□ 0.14
MKS1-206ENST00000577824 DDX46Q7L014 1031 aaKnown RBP15.9■□□□□ 0.14
MKS1-206ENST00000577824 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
MKS1-206ENST00000577824 LTBP1Q14766 1721 aa15.9■□□□□ 0.14
MKS1-206ENST00000577824 CACNA1SQ13698 1873 aa15.9■□□□□ 0.14
MKS1-206ENST00000577824 ITGA6P23229 1130 aa15.89■□□□□ 0.13
MKS1-206ENST00000577824 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
MKS1-206ENST00000577824 PIM2Q9P1W9 311 aa15.89■□□□□ 0.13
MKS1-206ENST00000577824 A0A1B0GUL6 1792 aa15.89■□□□□ 0.13
MKS1-206ENST00000577824 SLX4Q8IY92 1834 aa15.89■□□□□ 0.13
MKS1-206ENST00000577824 RFX5P48382 616 aaPredicted RBP15.88■□□□□ 0.13
MKS1-206ENST00000577824 PRPF40BQ6NWY9 871 aaKnown RBP15.88■□□□□ 0.13
MKS1-206ENST00000577824 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
MKS1-206ENST00000577824 KLHL34Q8N239 644 aa15.88■□□□□ 0.13
MKS1-206ENST00000577824 TTLL6Q8N841 843 aa15.88■□□□□ 0.13
MKS1-206ENST00000577824 CDC5LQ99459 802 aaKnown RBP15.88■□□□□ 0.13
MKS1-206ENST00000577824 SEC31BQ9NQW1 1179 aa15.88■□□□□ 0.13
MKS1-206ENST00000577824 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
MKS1-206ENST00000577824 TAF1P21675 1872 aa15.87■□□□□ 0.13
MKS1-206ENST00000577824 ANKRD18BA2A2Z9 1011 aa15.87■□□□□ 0.13
MKS1-206ENST00000577824 IFIT5Q13325 482 aaKnown RBP15.87■□□□□ 0.13
MKS1-206ENST00000577824 POLA2Q14181 598 aa15.87■□□□□ 0.13
MKS1-206ENST00000577824 RPAP2Q8IXW5 612 aaPredicted RBP15.87■□□□□ 0.13
MKS1-206ENST00000577824 SSH3Q8TE77 659 aa15.87■□□□□ 0.13
MKS1-206ENST00000577824 C7orf43Q8WVR3 580 aa15.87■□□□□ 0.13
MKS1-206ENST00000577824 CELF1Q92879 486 aaKnown RBP15.87■□□□□ 0.13
MKS1-206ENST00000577824 C1orf115Q9H7X2 142 aa15.87■□□□□ 0.13
MKS1-206ENST00000577824 BBOX1O75936 387 aa15.86■□□□□ 0.13
MKS1-206ENST00000577824 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
MKS1-206ENST00000577824 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
MKS1-206ENST00000577824 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
MKS1-206ENST00000577824 DUOX1Q9NRD9 1551 aa15.86■□□□□ 0.13
MKS1-206ENST00000577824 PNMA6EA0A0J9YXQ4 647 aa15.85■□□□□ 0.13
MKS1-206ENST00000577824 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
MKS1-206ENST00000577824 SRGAP3O43295 1099 aa15.85■□□□□ 0.13
MKS1-206ENST00000577824 RPS8P62241 208 aaKnown RBP15.85■□□□□ 0.13
MKS1-206ENST00000577824 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
MKS1-206ENST00000577824 PTPN12Q05209 780 aaKnown RBP15.85■□□□□ 0.13
MKS1-206ENST00000577824 DALRD3Q5D0E6 543 aaKnown RBP15.85■□□□□ 0.13
MKS1-206ENST00000577824 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
MKS1-206ENST00000577824 EXOC6Q8TAG9 804 aa15.85■□□□□ 0.13
MKS1-206ENST00000577824 BSDC1Q9NW68 430 aaPredicted RBP15.85■□□□□ 0.13
MKS1-206ENST00000577824 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
MKS1-206ENST00000577824 SIRT2Q8IXJ6 389 aa15.84■□□□□ 0.13
MKS1-206ENST00000577824 COPRSQ9NQ92 184 aa15.84■□□□□ 0.13
MKS1-206ENST00000577824 CHMP3Q9Y3E7 222 aa15.84■□□□□ 0.13
MKS1-206ENST00000577824 ATP6V0A2Q9Y487 856 aa15.84■□□□□ 0.13
MKS1-206ENST00000577824 FER1L6Q2WGJ9 1857 aa15.84■□□□□ 0.13
MKS1-206ENST00000577824 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.12
MKS1-206ENST00000577824 SOGA3Q5TF21 947 aa15.83■□□□□ 0.12
MKS1-206ENST00000577824 CIAO1O76071 339 aa15.82■□□□□ 0.12
MKS1-206ENST00000577824 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
MKS1-206ENST00000577824 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
MKS1-206ENST00000577824 SP8Q8IXZ3 490 aa15.82■□□□□ 0.12
MKS1-206ENST00000577824 PCDHB15Q9Y5E8 787 aa15.82■□□□□ 0.12
MKS1-206ENST00000577824 IRX6P78412 446 aaPredicted RBP15.81■□□□□ 0.12
MKS1-206ENST00000577824 ZNF594Q96JF6 807 aaPredicted RBP15.81■□□□□ 0.12
MKS1-206ENST00000577824 PODXL2Q9NZ53 605 aa15.81■□□□□ 0.12
MKS1-206ENST00000577824 NOP58Q9Y2X3 529 aaKnown RBP15.81■□□□□ 0.12
MKS1-206ENST00000577824 LTBP3Q9NS15 1303 aa15.8■□□□□ 0.12
MKS1-206ENST00000577824 HMMRO75330 724 aa15.8■□□□□ 0.12
MKS1-206ENST00000577824 YBX3P16989 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
MKS1-206ENST00000577824 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms