RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 PIM2Q9P1W9 311 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 TBC1D2BQ9UPU7 963 aa9.15□□□□□ -0.94
CASC3-205ENST00000577605 ZNF330Q9Y3S2 320 aaPredicted RBP9.15□□□□□ -0.94
CASC3-205ENST00000577605 NBPF26B4DH59 902 aa9.14□□□□□ -0.95
CASC3-205ENST00000577605 PDE6BP35913 854 aa9.14□□□□□ -0.95
CASC3-205ENST00000577605 DDR1Q08345 913 aa9.14□□□□□ -0.95
CASC3-205ENST00000577605 NBPF10Q6P3W6 841 aaKnown RBP9.14□□□□□ -0.95
CASC3-205ENST00000577605 ADGRD1Q6QNK2 874 aa9.14□□□□□ -0.95
CASC3-205ENST00000577605 TPTE2Q6XPS3 522 aa9.14□□□□□ -0.95
CASC3-205ENST00000577605 NBPF15Q8N660 670 aa9.14□□□□□ -0.95
CASC3-205ENST00000577605 BRIP1Q9BX63 1249 aa9.14□□□□□ -0.95
CASC3-205ENST00000577605 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
CASC3-205ENST00000577605 IL16Q14005 1332 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 PRAMEF22A3QJZ6 481 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 H0YIN7 160 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 NPHP1O15259 732 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 ZNF853P0CG23 659 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 ST5P78524 1137 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 TBC1D9BQ66K14 1250 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 DDX12PQ92771 950 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 NYXQ9GZU5 481 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 LAS1LQ9Y4W2 734 aaKnown RBP9.13□□□□□ -0.95
CASC3-205ENST00000577605 C4AP0C0L4 1744 aa9.13□□□□□ -0.95
CASC3-205ENST00000577605 MAP3K15Q6ZN16 1313 aa9.12□□□□□ -0.95
CASC3-205ENST00000577605 A0A0G2JLW4 131 aa9.12□□□□□ -0.95
CASC3-205ENST00000577605 DPEP1P16444 411 aa9.12□□□□□ -0.95
CASC3-205ENST00000577605 YBX3P16989 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
CASC3-205ENST00000577605 PTPREP23469 700 aa9.12□□□□□ -0.95
CASC3-205ENST00000577605 HSP90AB3PQ58FF7 597 aa9.12□□□□□ -0.95
CASC3-205ENST00000577605 DALRD3Q5D0E6 543 aaKnown RBP9.12□□□□□ -0.95
CASC3-205ENST00000577605 CNBD1Q8NA66 436 aa9.12□□□□□ -0.95
CASC3-205ENST00000577605 GPBP1L1Q9HC44 474 aaPredicted RBP9.12□□□□□ -0.95
CASC3-205ENST00000577605 DDX21Q9NR30 783 aaKnown RBP eCLIP9.12□□□□□ -0.95
CASC3-205ENST00000577605 DBF4Q9UBU7 674 aaPredicted RBP9.12□□□□□ -0.95
CASC3-205ENST00000577605 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
CASC3-205ENST00000577605 PXDNLA1KZ92 1463 aa9.12□□□□□ -0.95
CASC3-205ENST00000577605 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
CASC3-205ENST00000577605 KCNA3P22001 575 aa9.11□□□□□ -0.95
CASC3-205ENST00000577605 PARP10Q53GL7 1025 aa9.11□□□□□ -0.95
CASC3-205ENST00000577605 TYW1BQ6NUM6 668 aa9.11□□□□□ -0.95
CASC3-205ENST00000577605 GIGYF2Q6Y7W6 1299 aaKnown RBP9.11□□□□□ -0.95
CASC3-205ENST00000577605 BICDL1Q6ZP65 573 aa9.11□□□□□ -0.95
CASC3-205ENST00000577605 NBPF5PQ86XG9 351 aaPredicted RBP9.11□□□□□ -0.95
CASC3-205ENST00000577605 WDR63Q8IWG1 891 aa9.11□□□□□ -0.95
CASC3-205ENST00000577605 RNF166Q96A37 237 aaPredicted RBP9.11□□□□□ -0.95
CASC3-205ENST00000577605 HYPKQ9NX55 129 aa9.11□□□□□ -0.95
CASC3-205ENST00000577605 NIP7Q9Y221 180 aaKnown RBP eCLIP9.11□□□□□ -0.95
CASC3-205ENST00000577605 RNF123Q5XPI4 1314 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
CASC3-205ENST00000577605 TK2O00142 265 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 MYL6BP14649 208 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
CASC3-205ENST00000577605 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
CASC3-205ENST00000577605 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 HDGFL1Q5TGJ6 251 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 STYK1Q6J9G0 422 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 PPP1R42Q7Z4L9 355 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 WWC1Q8IX03 1113 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 TTLL6Q8N841 843 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 FBXW7Q969H0 707 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 CNKSR1Q969H4 720 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 BCS1LQ9Y276 419 aa9.1□□□□□ -0.95
CASC3-205ENST00000577605 IBTKQ9P2D0 1353 aaPredicted RBP9.1□□□□□ -0.95
CASC3-205ENST00000577605 MYH14Q7Z406 1995 aaKnown RBP9.1□□□□□ -0.95
CASC3-205ENST00000577605 ATP10DQ9P241 1426 aa9.09□□□□□ -0.95
CASC3-205ENST00000577605 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
CASC3-205ENST00000577605 CCDC184Q52MB2 194 aa9.09□□□□□ -0.95
CASC3-205ENST00000577605 CCDC30Q5VVM6 783 aa9.09□□□□□ -0.95
CASC3-205ENST00000577605 DUSP27Q5VZP5 1158 aa9.09□□□□□ -0.95
CASC3-205ENST00000577605 C2CD5Q86YS7 1000 aa9.09□□□□□ -0.95
CASC3-205ENST00000577605 KDM3BQ7LBC6 1761 aa9.09□□□□□ -0.95
CASC3-205ENST00000577605 KLRG2A4D1S0 409 aaPredicted RBP9.08□□□□□ -0.96
CASC3-205ENST00000577605 HSP90B1P14625 803 aaKnown RBP9.08□□□□□ -0.96
CASC3-205ENST00000577605 ALDH1B1P30837 517 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 PIP4K2AP48426 406 aaPredicted RBP9.08□□□□□ -0.96
CASC3-205ENST00000577605 GRIPAP1Q4V328 841 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 ARHGAP27Q6ZUM4 889 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 COPS6Q7L5N1 327 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 LRP10Q7Z4F1 713 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 ZNF34Q8IZ26 560 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 PLBD2Q8NHP8 589 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 MASTLQ96GX5 879 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 EPAS1Q99814 870 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 KDM4CQ9H3R0 1056 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 VPS9D1Q9Y2B5 631 aa9.08□□□□□ -0.96
CASC3-205ENST00000577605 VIRMAQ69YN4 1812 aaKnown RBP9.08□□□□□ -0.96
CASC3-205ENST00000577605 APBB1O00213 710 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 DDX58O95786 925 aaKnown RBP9.07□□□□□ -0.96
CASC3-205ENST00000577605 SRGNP10124 158 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 NPR1P16066 1061 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 CHRNA5P30532 468 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 HLFQ16534 295 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 MYH16Q9H6N6 1097 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 KIF13BQ9NQT8 1826 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 SCN7AQ01118 1682 aa9.07□□□□□ -0.96
CASC3-205ENST00000577605 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms